; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g21890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g21890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr7:16069100..16071957
RNA-Seq ExpressionMoc07g21890
SyntenyMoc07g21890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033214.1 uncharacterized protein E6C27_scaffold845G00030 [Cucumis melo var. makuwa]1.5e-2533.33Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F+L+     L+A +LL+R  + A++++SP  FSLTV H      V  Q++PQFF HFFS++TH S+I L     TI  + +  +SS+++ + +   RLL+
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F      SPR                                    DE P+  R   +     ED G +D    VSI S  FR I+ E   D +VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+FC+  KE I   E   C+I+G+  G  +EFLI ++PT  + N+T +A+R
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

KGN45635.1 hypothetical protein Csa_005498 [Cucumis sativus]4.7e-2733.33Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F+L+ + P L+A ++L+R  + A+++ SP  FSL V H +    V  Q++PQFF +FFS+ TH S+IP+     TI  + +   +SL+  + +  +RL+L
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F S  N  P I                                          R   +    +ED+G IDL + VSI S+ FRR+V     D  VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+F +  KE I   E   C+++G+  G+  EFLI I+PT  F N+T RAKR
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]5.7e-2536Show/hide
Query:  FGFNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRL
        F   L  + PL +A   LTR++  AD+KFSP KF + VS +SPPF   LQ+ P+FFT F  D  H SRI L   H  +  ++   + ++T  L +  NRL
Subjt:  FGFNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRL

Query:  LLQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFAN--DDLV
        LL+F +S N                                           P   R L LS   EEDVG+ID  + VSIGS +FR IV + +   +  +
Subjt:  LLQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFAN--DDLV

Query:  RVVLTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFF
           LT S+VKF    +EIILT E  +C+I     G E +F  T+HPT+FF
Subjt:  RVVLTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFF

XP_031737295.1 uncharacterized protein LOC101209763 [Cucumis sativus]6.7e-2632.16Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        FNL+     L+A +LL+R  ++A++++SP  FS+T+ H      V  Q++PQFF ++FS+ TH S++ L     TI  + +  +SS++L L +   RLL+
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F S     P I                                          R   +     ED G +D    VSI S  FR I+ E   D +VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+FC+  KEII   EE  C+I+G+  G  +EFLI ++PT  + N+T +A+R
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

XP_031744101.1 uncharacterized protein LOC116404781 [Cucumis sativus]4.7e-2733.33Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F+L+ + P L+A ++L+R  + A+++ SP  FSL V H +    V  Q++PQFF +FFS+ TH S+IP+     TI  + +   +SL+  + +  +RL+L
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F S  N  P I                                          R   +    +ED+G IDL + VSI S+ FRR+V     D  VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+F +  KE I   E   C+++G+  G+  EFLI I+PT  F N+T RAKR
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein2.3e-2733.33Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F+L+ + P L+A ++L+R  + A+++ SP  FSL V H +    V  Q++PQFF +FFS+ TH S+IP+     TI  + +   +SL+  + +  +RL+L
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F S  N  P I                                          R   +    +ED+G IDL + VSI S+ FRR+V     D  VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+F +  KE I   E   C+++G+  G+  EFLI I+PT  F N+T RAKR
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

A0A5D3CM59 Uncharacterized protein7.3e-2633.33Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F+L+     L+A +LL+R  + A++++SP  FSLTV H      V  Q++PQFF HFFS++TH S+I L     TI  + +  +SS+++ + +   RLL+
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
        +F      SPR                                    DE P+  R   +     ED G +D    VSI S  FR I+ E   D +VRV  
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        T+S V+FC+  KE I   E   C+I+G+  G  +EFLI ++PT  + N+T +A+R
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

A0A6J1CUU8 uncharacterized protein LOC1110149882.8e-2536Show/hide
Query:  FGFNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRL
        F   L  + PL +A   LTR++  AD+KFSP KF + VS +SPPF   LQ+ P+FFT F  D  H SRI L   H  +  ++   + ++T  L +  NRL
Subjt:  FGFNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRL

Query:  LLQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFAN--DDLV
        LL+F +S N                                           P   R L LS   EEDVG+ID  + VSIGS +FR IV + +   +  +
Subjt:  LLQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFAN--DDLV

Query:  RVVLTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFF
           LT S+VKF    +EIILT E  +C+I     G E +F  T+HPT+FF
Subjt:  RVVLTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFF

A0A6J1HJS7 uncharacterized protein LOC1114642078.9e-2432.81Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHT-HFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLL
        F LD+  PLL+AT  L  + ++AD++ +P   SL V H SP F   L + P FFT F+++   H+S I L LF+ T++ +N  GFSS+   L +++NRL 
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHT-HFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLL

Query:  LQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVV
        L+F   S   P++ +                                        R L L+ P    + ++D  + VSI S  FR IV E  + D   V 
Subjt:  LQFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVV

Query:  LTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR
        LT S+VKF +  KEI+LT  + +C+I  +    EI+F+IT+ PT FF +++ ++ R
Subjt:  LTYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKR

A0A6J1L0Z0 uncharacterized protein LOC1114988911.2e-2332.95Show/hide
Query:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL
        F LD   PLL+A  LL+ ++ +A++K +    +L+V+  +  F   LQ++P+FF  F+SD  H SRIPL L    +  +   GFSS+  +L Q  + +LL
Subjt:  FNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLL

Query:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL
         F     + P ++  + LL  +                                          E + QID  + VSI S DFRR++LE  N   V V +
Subjt:  QFPSSSNNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVL

Query:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKRSNF
        T S+VKF + + EI+ T EE R +I G+R G E++FLIT++P  FF +++  AKR+ F
Subjt:  TYSRVKFCSGTKEIILTVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKRSNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCGGGTTCAATCTCGACCAAGTCAAGCCACTTCTCGAAGCAACCTTCCTCCTCACTCGCCTTTCCGACGAAGCCGACATGAAATTCTCGCCGGAAAAGTTCTC
CCTAACAGTCTCCCACCTCTCCCCTCCCTTCACCGTAGTCCTCCAAATCATTCCCCAATTCTTCACCCACTTTTTCTCCGACCACACTCACTTTTCCAGAATCCCCCTCC
TCCTCTTCCATCGAACCATCTCTCACATCAATCAAACAGGATTTTCTTCACTCACCCTCTCTCTCGATCAACAAAATAATCGTCTCCTCCTTCAGTTTCCAAGTTCAAGT
AACAATTCCCCAAGAATTATTAATCTTGTTTCTCTATTGGGTTTTCAAGAAGATAGCAAAATCTTGATTCTTTTTTTCAAAGATCTGATCTTGATCGCGCCATGTGTTGT
TGTTTTAGGGGACGACGAGCAGCCAATACCGAATCGCCATCTGGCATTGTCGGATCCGGCGGAGGAAGATGTCGGCCAGATTGATCTTCGAAGTTCTGTCTCAATTGGTT
CACGAGATTTCAGACGCATTGTTTTAGAGTTTGCAAATGATGACTTGGTTCGTGTTGTTCTAACCTATTCACGAGTCAAGTTCTGTAGTGGAACAAAGGAGATTATTCTT
ACCGTAGAGGAAAATCGATGCGTAATTGATGGCATTAGGGTAGGACGGGAAATTGAATTCTTAATCACTATTCACCCCACGACGTTTTTTGGTAATATGACGTGTCGGGC
GAAAAGGTCGAATTTTTGTTTTCCGAGGAAATCTGGACTTCTGGCCCGTGTACTTTGTCGTGGCCTAAAGTCGAATCGAGATTTGAGACGGATAGGTTCGGGCCTGGCTG
CACAACAGTCGGGGAGCACCATTGGAGTTCTCGACCAGAAGTCGAGAATTGCTCAGCGTCGAGAACTGGTCGGCATCGACCCTGGGTCGATCGTGGTCGACCTGGGTCAT
CTTCTTATTTCTTTACCTGGTTCATGCATAGGAGCCCACTTCCCTTTCAACCTTTTATATCACTTAGTCGGATCTCGTCTGAACACTCTAGATCGGGTCATGCTTCGGGC
CATGACCAGTGATGTAATTCGCATGTCGCGTCTGCTTTTGTCTTCTCATATTAAATATTATCATGCAACACCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTCGGGTTCAATCTCGACCAAGTCAAGCCACTTCTCGAAGCAACCTTCCTCCTCACTCGCCTTTCCGACGAAGCCGACATGAAATTCTCGCCGGAAAAGTTCTC
CCTAACAGTCTCCCACCTCTCCCCTCCCTTCACCGTAGTCCTCCAAATCATTCCCCAATTCTTCACCCACTTTTTCTCCGACCACACTCACTTTTCCAGAATCCCCCTCC
TCCTCTTCCATCGAACCATCTCTCACATCAATCAAACAGGATTTTCTTCACTCACCCTCTCTCTCGATCAACAAAATAATCGTCTCCTCCTTCAGTTTCCAAGTTCAAGT
AACAATTCCCCAAGAATTATTAATCTTGTTTCTCTATTGGGTTTTCAAGAAGATAGCAAAATCTTGATTCTTTTTTTCAAAGATCTGATCTTGATCGCGCCATGTGTTGT
TGTTTTAGGGGACGACGAGCAGCCAATACCGAATCGCCATCTGGCATTGTCGGATCCGGCGGAGGAAGATGTCGGCCAGATTGATCTTCGAAGTTCTGTCTCAATTGGTT
CACGAGATTTCAGACGCATTGTTTTAGAGTTTGCAAATGATGACTTGGTTCGTGTTGTTCTAACCTATTCACGAGTCAAGTTCTGTAGTGGAACAAAGGAGATTATTCTT
ACCGTAGAGGAAAATCGATGCGTAATTGATGGCATTAGGGTAGGACGGGAAATTGAATTCTTAATCACTATTCACCCCACGACGTTTTTTGGTAATATGACGTGTCGGGC
GAAAAGGTCGAATTTTTGTTTTCCGAGGAAATCTGGACTTCTGGCCCGTGTACTTTGTCGTGGCCTAAAGTCGAATCGAGATTTGAGACGGATAGGTTCGGGCCTGGCTG
CACAACAGTCGGGGAGCACCATTGGAGTTCTCGACCAGAAGTCGAGAATTGCTCAGCGTCGAGAACTGGTCGGCATCGACCCTGGGTCGATCGTGGTCGACCTGGGTCAT
CTTCTTATTTCTTTACCTGGTTCATGCATAGGAGCCCACTTCCCTTTCAACCTTTTATATCACTTAGTCGGATCTCGTCTGAACACTCTAGATCGGGTCATGCTTCGGGC
CATGACCAGTGATGTAATTCGCATGTCGCGTCTGCTTTTGTCTTCTCATATTAAATATTATCATGCAACACCCGATTGA
Protein sequenceShow/hide protein sequence
MSFGFNLDQVKPLLEATFLLTRLSDEADMKFSPEKFSLTVSHLSPPFTVVLQIIPQFFTHFFSDHTHFSRIPLLLFHRTISHINQTGFSSLTLSLDQQNNRLLLQFPSSS
NNSPRIINLVSLLGFQEDSKILILFFKDLILIAPCVVVLGDDEQPIPNRHLALSDPAEEDVGQIDLRSSVSIGSRDFRRIVLEFANDDLVRVVLTYSRVKFCSGTKEIIL
TVEENRCVIDGIRVGREIEFLITIHPTTFFGNMTCRAKRSNFCFPRKSGLLARVLCRGLKSNRDLRRIGSGLAAQQSGSTIGVLDQKSRIAQRRELVGIDPGSIVVDLGH
LLISLPGSCIGAHFPFNLLYHLVGSRLNTLDRVMLRAMTSDVIRMSRLLLSSHIKYYHATPD