; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g21900 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g21900
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr7:16073469..16074661
RNA-Seq ExpressionMoc07g21900
SyntenyMoc07g21900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022958854.1 uncharacterized protein LOC111460008 [Cucurbita moschata]1.6e-2844.32Show/hide
Query:  MFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQ
        M +L  S  S H F+A+LQ  P+FFT+F+ D  H S IP+   Y  +L M  R F+SM   L +   ++ L F  S    +V+   L  S P+E  +M Q
Subjt:  MFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQ

Query:  IDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR
        ID  T+VSIDSQDFR IV + +   VHV+LTDSQVKF  +  E +  KEE +C+I G+  G+  EF ITL P+ FFH+ +Y A R
Subjt:  IDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR

XP_022964070.1 uncharacterized protein LOC111464207 [Cucurbita moschata]3.3e-2943.52Show/hide
Query:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP
        ++++P M SL+V H SP  F A L  SP FFTFF  +   H S I +   Y  +  M+ R FSSM  FL E  NRL L+F +S  +     F  L L+ P
Subjt:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP

Query:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV
          N + ++D  T+VSIDS  FR+IV +      HVTLTDSQVKFS+A+ E +  K + +C+I  V+  DEI+F+ITL P  FFH  ++ + RV
Subjt:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV

XP_023000628.1 uncharacterized protein LOC111494871 [Cucurbita maxima]1.2e-2843.01Show/hide
Query:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP
        ++++P M SL+V H SP  F A L  SP FFTF+  + + H S I +   Y  +  M+ R FSSM  FL E  NRL L+F +S  +     F  L L+ P
Subjt:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP

Query:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV
          N + ++D  T+VSIDS  FR IV +      HVTLTDSQVKFS+A+ E +  K + +C+I  VT  DEI+F+I L P  FFH  ++ + RV
Subjt:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV

XP_023006012.1 uncharacterized protein LOC111498889 [Cucurbita maxima]7.3e-2945.35Show/hide
Query:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD
        F+A+LQ  P+FFT+F+ D  H S IP+   Y ++L M  R F+SM   L +   ++ L F  S    +V+   L  S P+E  +M  ID  T+VSIDSQD
Subjt:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD

Query:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR
        FR IV + +   VHV+LT+SQVKFS +  E +  KEE  C+I G+  G E EF ITLHP+ FFH+ +Y A R
Subjt:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR

XP_023548337.1 uncharacterized protein LOC111807005 [Cucurbita pepo subsp. pepo]9.5e-2944.77Show/hide
Query:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD
        F+A+LQ  P+FFT+F+ D +H S IP+   Y ++L M    F+SM   L +   ++ L F  S    +V+   L  S P+E  +M QID  T+VSIDSQD
Subjt:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD

Query:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR
        FR IV + +   VHV+LTDSQVKF  +  E +  KEE +C+I G+  G+  EF ITLHP+ FFH+ +Y A R
Subjt:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein1.5e-2741.36Show/hide
Query:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE
        ++ SP+MFSL V H +  L V A Q  PQFF +F  + TH S+IPI  L+N I  M   + +S++ F+ +  +RL L+F SS ++   L     +   V+
Subjt:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE

Query:  NDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV
         DMG ID  T+VSIDSQ FR +V       V VT T S V+FS+   EFIF +E  EC+++GV  G   EFLI ++P   F+   + A RV
Subjt:  NDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV

A0A6J1H6B6 uncharacterized protein LOC1114600087.8e-2944.32Show/hide
Query:  MFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQ
        M +L  S  S H F+A+LQ  P+FFT+F+ D  H S IP+   Y  +L M  R F+SM   L +   ++ L F  S    +V+   L  S P+E  +M Q
Subjt:  MFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQ

Query:  IDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR
        ID  T+VSIDSQDFR IV + +   VHV+LTDSQVKF  +  E +  KEE +C+I G+  G+  EF ITL P+ FFH+ +Y A R
Subjt:  IDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR

A0A6J1HJS7 uncharacterized protein LOC1114642071.6e-2943.52Show/hide
Query:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP
        ++++P M SL+V H SP  F A L  SP FFTFF  +   H S I +   Y  +  M+ R FSSM  FL E  NRL L+F +S  +     F  L L+ P
Subjt:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP

Query:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV
          N + ++D  T+VSIDS  FR+IV +      HVTLTDSQVKFS+A+ E +  K + +C+I  V+  DEI+F+ITL P  FFH  ++ + RV
Subjt:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV

A0A6J1KN57 uncharacterized protein LOC1114948716.0e-2943.01Show/hide
Query:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP
        ++++P M SL+V H SP  F A L  SP FFTF+  + + H S I +   Y  +  M+ R FSSM  FL E  NRL L+F +S  +     F  L L+ P
Subjt:  MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHT-HCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQF-YSSGQSGQVLFHHLMLSSP

Query:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV
          N + ++D  T+VSIDS  FR IV +      HVTLTDSQVKFS+A+ E +  K + +C+I  VT  DEI+F+I L P  FFH  ++ + RV
Subjt:  VENDMGQIDPRTYVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRV

A0A6J1KUR4 uncharacterized protein LOC1114988893.5e-2945.35Show/hide
Query:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD
        F+A+LQ  P+FFT+F+ D  H S IP+   Y ++L M  R F+SM   L +   ++ L F  S    +V+   L  S P+E  +M  ID  T+VSIDSQD
Subjt:  FVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVE-NDMGQIDPRTYVSIDSQD

Query:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR
        FR IV + +   VHV+LT+SQVKFS +  E +  KEE  C+I G+  G E EF ITLHP+ FFH+ +Y A R
Subjt:  FRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCTCTCCCACAATGTTCTCCCTCAAAGTCTCCCATTTCTCCCCCCATTTGTTCGTCGCAGCCCTTCAATTTTCCCCTCAATTCTTCACCTTCTTCTCCTTCGA
CCACACCCACTGCTCAAGAATTCCCATCCACCGTCTCTACAATCTCATTCTCGACATGTCGCACAGAAAATTCTCCTCCATGGCCCTCTTTCTTGACGAAGAACACAACC
GCCTGGCCCTCCAATTTTACAGTTCTGGGCAATCGGGGCAAGTTTTGTTTCATCATTTGATGTTGTCGAGCCCGGTGGAGAACGACATGGGCCAAATTGATCCAAGAACT
TATGTCTCAATTGATTCACAAGATTTCAGACACATTGTACAACAGTTTGAGCCTGGCTTAGTTCATGTCACTCTAACCGATTCACAAGTCAAGTTCTCCGATGCTAATAC
AGAGTTTATTTTTGTAAAAGAGGAAGACGAATGTGTGATTGATGGTGTTACAGCGGGAGATGAAATTGAATTCCTAATCACTCTTCATCCCGTAGAATTTTTTCATAAAA
CGGCGTATAATGCAGGAAGGGTCACATGGGAAAACAACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCTCTCCCACAATGTTCTCCCTCAAAGTCTCCCATTTCTCCCCCCATTTGTTCGTCGCAGCCCTTCAATTTTCCCCTCAATTCTTCACCTTCTTCTCCTTCGA
CCACACCCACTGCTCAAGAATTCCCATCCACCGTCTCTACAATCTCATTCTCGACATGTCGCACAGAAAATTCTCCTCCATGGCCCTCTTTCTTGACGAAGAACACAACC
GCCTGGCCCTCCAATTTTACAGTTCTGGGCAATCGGGGCAAGTTTTGTTTCATCATTTGATGTTGTCGAGCCCGGTGGAGAACGACATGGGCCAAATTGATCCAAGAACT
TATGTCTCAATTGATTCACAAGATTTCAGACACATTGTACAACAGTTTGAGCCTGGCTTAGTTCATGTCACTCTAACCGATTCACAAGTCAAGTTCTCCGATGCTAATAC
AGAGTTTATTTTTGTAAAAGAGGAAGACGAATGTGTGATTGATGGTGTTACAGCGGGAGATGAAATTGAATTCCTAATCACTCTTCATCCCGTAGAATTTTTTCATAAAA
CGGCGTATAATGCAGGAAGGGTCACATGGGAAAACAACAAGTAG
Protein sequenceShow/hide protein sequence
MKLSPTMFSLKVSHFSPHLFVAALQFSPQFFTFFSFDHTHCSRIPIHRLYNLILDMSHRKFSSMALFLDEEHNRLALQFYSSGQSGQVLFHHLMLSSPVENDMGQIDPRT
YVSIDSQDFRHIVQQFEPGLVHVTLTDSQVKFSDANTEFIFVKEEDECVIDGVTAGDEIEFLITLHPVEFFHKTAYNAGRVTWENNK