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Moc07g21950 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g21950
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr7:16102687..16103070
RNA-Seq ExpressionMoc07g21950
SyntenyMoc07g21950
Gene Ontology termsGO:0019538 - protein metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN60574.1 hypothetical protein VITISV_013750 [Vitis vinifera]3.0e-2854.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEK
        FVLAL+ HE  +  E EE K
Subjt:  FVLALKNHELQLTAEVEEEK
RVW19921.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]3.0e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.0e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
RVW93768.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]4.0e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
XP_022154021.1 uncharacterized protein LOC111021379 [Momordica charantia]8.5e-3969.42Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        ++E  ++A +VW SLEELLLTMTKENEIHLNE+L++L+K S+SM++Y+++FK LCD+L AMKKPLDD TK+FHLA+ LG KYKDFR AMLSKAPYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKS
        FVLALK H+  LT E EE  S
Subjt:  FVLALKNHELQLTAEVEEEKS
TrEMBL top hitse value%identityAlignment
A0A438C9J9 Retrovirus-related Pol polyprotein from transposon RE11.5e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
A0A438IAM2 Retrovirus-related Pol polyprotein from transposon RE11.9e-2853.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKSHSMDH
        FVLAL+ HE  +  E EE K  S++H
Subjt:  FVLALKNHELQLTAEVEEEKSHSMDH
A0A6J1DMG5 uncharacterized protein LOC1110213794.1e-3969.42Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        ++E  ++A +VW SLEELLLTMTKENEIHLNE+L++L+K S+SM++Y+++FK LCD+L AMKKPLDD TK+FHLA+ LG KYKDFR AMLSKAPYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEKS
        FVLALK H+  LT E EE  S
Subjt:  FVLALKNHELQLTAEVEEEKS
A5AU03 Reverse transcriptase Ty1/copia-type domain-containing protein1.5e-2854.17Show/hide
Query:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ
        +++  ++AY VW SL E LL MTKE E+ L   L  ++K + S+++YL+ FKG+CD LAA++KP+ D  K+F LA+ LG KY DFR+AMLSK PYPSYNQ
Subjt:  MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQ

Query:  FVLALKNHELQLTAEVEEEK
        FVLAL+ HE  +  E EE K
Subjt:  FVLALKNHELQLTAEVEEEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGCAAATGATAGTGCCTATCAAGTTTGGAAATCACTTGAAGAACTTCTCCTAACCATGACCAAGGAGAATGAAATCCATCTAAATGAATCCTTAGTC
AGTCTAAGAAAGGAGAGTATGAGCATGGAAGACTATCTAAAGAGATTTAAGGGATTATGTGACAAACTTGCAGCTATGAAAAAGCCCCTTGATGACACAACCAAA
CTCTTCCACCTTGCAAAGTGTTTGGGAGGTAAGTACAAAGATTTCAGAATTGCTATGCTTTCCAAAGCCCCTTATCCATCTTACAATCAGTTCGTGCTAGCACTA
AAGAACCATGAACTACAACTTACTGCTGAAGTTGAAGAAGAAAAATCACATTCTATGGACCACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGCAAATGATAGTGCCTATCAAGTTTGGAAATCACTTGAAGAACTTCTCCTAACCATGACCAAGGAGAATGAAATCCATCTAAATGAATCCTTAGTC
AGTCTAAGAAAGGAGAGTATGAGCATGGAAGACTATCTAAAGAGATTTAAGGGATTATGTGACAAACTTGCAGCTATGAAAAAGCCCCTTGATGACACAACCAAA
CTCTTCCACCTTGCAAAGTGTTTGGGAGGTAAGTACAAAGATTTCAGAATTGCTATGCTTTCCAAAGCCCCTTATCCATCTTACAATCAGTTCGTGCTAGCACTA
AAGAACCATGAACTACAACTTACTGCTGAAGTTGAAGAAGAAAAATCACATTCTATGGACCACAGTTAG
Protein sequenceShow/hide protein sequence
MMEANDSAYQVWKSLEELLLTMTKENEIHLNESLVSLRKESMSMEDYLKRFKGLCDKLAAMKKPLDDTTKLFHLAKCLGGKYKDFRIAMLSKAPYPSYNQFVLAL
KNHELQLTAEVEEEKSHSMDHS