; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g21970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g21970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr7:16115604..16117194
RNA-Seq ExpressionMoc07g21970
SyntenyMoc07g21970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3136.44Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L++L    P L+ATSLLTQI+ DAD+  +  + ++IA+H S RFV  L+   R F +YS+D  + SK+SL +FH+A+LDG + SSM+IH+LE+  +MI
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFEN-SKYEPEKRHELDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL
        LR+EN S  +P    EL LSPP  E +                                                       G C I+G +GE E T+  
Subjt:  LRFEN-SKYEPEKRHELDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL

Query:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYFP
        IT  P  FFL   ++A++VWF+KT +S+  I VP F  +  Y++YFP
Subjt:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYFP

KAG7026012.1 hypothetical protein SDJN02_12510, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-3140.28Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+R+ +  P ++ TS L QIA ++DI  +PL   +  +  S RF+ +L+   + F  YS++  H S+ISL + H+ALLD  +SSSMTIHLLEN N M 
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLSPPTEEEVE------------------GECIILGRDGEAETTQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRV--PF
        LRFE   +EP+ RH++ L PP E+ +E                  G C ILG DG+A  ++F I L+P  FFL L +    VWF KT+ +   + +   F
Subjt:  LRFENSKYEPEKRHELDLSPPTEEEVE------------------GECIILGRDGEAETTQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRV--PF

Query:  DTHA-YLIYFP
        +  A Y+IYFP
Subjt:  DTHA-YLIYFP

XP_022156149.1 uncharacterized protein LOC111023105 [Momordica charantia]1.2e-4747.98Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M  IR+ +I   L+ATS LT+IAD+  + L+P LF++IA+HRSSRF VVLK PR FF +YS+   H S+IS+HAFH ALLD STS SMTIH+ ++INR I
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLS---------------------------------------------PPTEEEVE--------------GECIILGRDGEAET
        LRFENS ++ EKRHEL  S                                               T+ EV               G+C ILGR GE E 
Subjt:  LRFENSKYEPEKRHELDLS---------------------------------------------PPTEEEVE--------------GECIILGRDGEAET

Query:  TQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHAYLIYF
        TQFLIT+ P  FFLG+  Q+ KVWFFKTVDSRGA+RVPFDT+ Y+IYF
Subjt:  TQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHAYLIYF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]7.0e-2936.99Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+RL H  P   ATSLL QI+++AD+  S   F++I ++ S RFV   +   RFFA+YS+D+ H S++SL +F++A+ DG   SSMTIH  E  +RM+
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL
        L+FE+S +   K H  L LSP  EEE+                                                       G C I+G +GEAE   F 
Subjt:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL

Query:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF
        I L+P  FF  L + A ++WF+KT+DSR  I VP F  +A Y+IYF
Subjt:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]2.6e-3138.21Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+RL +  PF +ATS L  IA +AD+  +PL F+I  +++  RFV  L      F +Y +D  H S+ISL +FH+ALLDG  S SMTIHLL NIN+MI
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFLI
        LRFE+S + P+ RHEL L P  EE++                                                        ECII+G +GE E T+  I
Subjt:  LRFENSKYEPEKRHELDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFLI

Query:  TLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYFP
         L+P  FFL   H   +VWF+KT    GA+ VP F  ++ Y+I FP
Subjt:  TLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYFP

TrEMBL top hitse value%identityAlignment
A0A6J1CUU8 uncharacterized protein LOC1110149884.9e-2836.07Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M LIRL  IAP  +A   LT+IA  AD+  SP  F II +  S  F+  L+    FF S+++D  H S+I L + H+ L+DG    +MT HLLEN NR++
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLSPPTEEEV----EGECIILGRD-------------------------------------------------GEAETTQFLIT
        LRFENS+  P  R ELDLSP  EE+V     G C+ +G D                                                      T+F  T
Subjt:  LRFENSKYEPEKRHELDLSPPTEEEV----EGECIILGRD-------------------------------------------------GEAETTQFLIT

Query:  LHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHA-YLIYFP
        LHPT FF  L  +   VW  K+ DSR  I +PF  +  +L+YFP
Subjt:  LHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHA-YLIYFP

A0A6J1DSH6 uncharacterized protein LOC1110231055.6e-4847.98Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M  IR+ +I   L+ATS LT+IAD+  + L+P LF++IA+HRSSRF VVLK PR FF +YS+   H S+IS+HAFH ALLD STS SMTIH+ ++INR I
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLS---------------------------------------------PPTEEEVE--------------GECIILGRDGEAET
        LRFENS ++ EKRHEL  S                                               T+ EV               G+C ILGR GE E 
Subjt:  LRFENSKYEPEKRHELDLS---------------------------------------------PPTEEEVE--------------GECIILGRDGEAET

Query:  TQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHAYLIYF
        TQFLIT+ P  FFLG+  Q+ KVWFFKTVDSRGA+RVPFDT+ Y+IYF
Subjt:  TQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHAYLIYF

A0A6J1H2Z8 uncharacterized protein LOC1114600114.9e-2834.96Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+RL H  P + ATS+L QI+++AD+  S   F++I ++ S RFV   +   RFFA+Y +D+ H S++SL +F+NA+  G   SSMTIH  E  +RM+
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL
        L+FE+S +   + H  L LSP  EEE+                                                       G C+I+G +G+AE   F 
Subjt:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL

Query:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF
        I L+P  FF  L + A ++WF+KT+DSR  I +P F  +A Y+IYF
Subjt:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF

A0A6J1KIW5 uncharacterized protein LOC1114948741.4e-2734.82Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+RL +  P ++ TS L QIA ++DI  +PL   +  +  S RF+  L+   + F  YS++  H S+ISL + H+ALLD  +SS+MTIHLLEN N M+
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHELDLSPPTEEEVE------------------------------------------------------GECIILGRDGEAETTQFLI
        LRFE   +EP+ RH+  L PP E+ +E                                                      G C ILG DG+A  T+F I
Subjt:  LRFENSKYEPEKRHELDLSPPTEEEVE------------------------------------------------------GECIILGRDGEAETTQFLI

Query:  TLHPTQFFLGLIHQADKVWFFKTVDSRGAIRV--PFDTHA-YLIYFP
         L+P  FFL L +    VWF KT+ +   + +   F+  A Y+IYFP
Subjt:  TLHPTQFFLGLIHQADKVWFFKTVDSRGAIRV--PFDTHA-YLIYFP

A0A6J1KZ05 uncharacterized protein LOC1114988873.4e-2936.99Show/hide
Query:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI
        M L+RL H  P   ATSLL QI+++AD+  S   F++I ++ S RFV   +   RFFA+YS+D+ H S++SL +F++A+ DG   SSMTIH  E  +RM+
Subjt:  MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMI

Query:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL
        L+FE+S +   K H  L LSP  EEE+                                                       G C I+G +GEAE   F 
Subjt:  LRFENSKYEPEKRHE-LDLSPPTEEEV------------------------------------------------------EGECIILGRDGEAETTQFL

Query:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF
        I L+P  FF  L + A ++WF+KT+DSR  I VP F  +A Y+IYF
Subjt:  ITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVP-FDTHA-YLIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTGATCAGGCTTGATCACATTGCTCCTTTTCTGAACGCCACCTCCCTCCTCACTCAAATCGCCGACGACGCCGACATCAATCTCTCCCCGTTGCTGTTCACGAT
AATCGCCACGCACCGTTCCTCCCGCTTCGTCGTGGTGCTGAAGAAACCGCGTCGATTCTTCGCGTCCTACTCCATCGATCAGATTCACGGTTCAAAGATTTCCCTCCACG
CCTTCCACAATGCTCTCTTGGATGGCTCGACTTCCTCCTCAATGACCATCCATCTCCTAGAAAACATTAATCGCATGATCCTTAGATTTGAGAATTCAAAGTATGAGCCT
GAGAAGCGCCATGAATTGGATTTGTCACCTCCAACAGAGGAGGAGGTGGAAGGAGAATGCATAATTCTTGGTCGTGATGGAGAAGCTGAAACGACTCAATTCCTAATCAC
TCTCCATCCCACGCAGTTTTTCCTTGGTTTGATACATCAAGCAGACAAGGTTTGGTTTTTCAAGACAGTTGATTCTCGTGGTGCAATCCGTGTTCCTTTTGACACGCATG
CTTATTTGATCTATTTTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTGATCAGGCTTGATCACATTGCTCCTTTTCTGAACGCCACCTCCCTCCTCACTCAAATCGCCGACGACGCCGACATCAATCTCTCCCCGTTGCTGTTCACGAT
AATCGCCACGCACCGTTCCTCCCGCTTCGTCGTGGTGCTGAAGAAACCGCGTCGATTCTTCGCGTCCTACTCCATCGATCAGATTCACGGTTCAAAGATTTCCCTCCACG
CCTTCCACAATGCTCTCTTGGATGGCTCGACTTCCTCCTCAATGACCATCCATCTCCTAGAAAACATTAATCGCATGATCCTTAGATTTGAGAATTCAAAGTATGAGCCT
GAGAAGCGCCATGAATTGGATTTGTCACCTCCAACAGAGGAGGAGGTGGAAGGAGAATGCATAATTCTTGGTCGTGATGGAGAAGCTGAAACGACTCAATTCCTAATCAC
TCTCCATCCCACGCAGTTTTTCCTTGGTTTGATACATCAAGCAGACAAGGTTTGGTTTTTCAAGACAGTTGATTCTCGTGGTGCAATCCGTGTTCCTTTTGACACGCATG
CTTATTTGATCTATTTTCCCTAA
Protein sequenceShow/hide protein sequence
MILIRLDHIAPFLNATSLLTQIADDADINLSPLLFTIIATHRSSRFVVVLKKPRRFFASYSIDQIHGSKISLHAFHNALLDGSTSSSMTIHLLENINRMILRFENSKYEP
EKRHELDLSPPTEEEVEGECIILGRDGEAETTQFLITLHPTQFFLGLIHQADKVWFFKTVDSRGAIRVPFDTHAYLIYFP