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Moc07g25450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g25450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCRC domain-containing protein TSO1-like
Genome locationchr7:19007564..19011120
RNA-Seq ExpressionMoc07g25450
SyntenyMoc07g25450
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044522 - CRC domain-containing protein TSO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057436.1 CRC domain-containing protein TSO1 [Cucumis melo var. makuwa]1.7e-2862.31Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP    NE GAV IMDQLL IFVPE+    T + P
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP

Query:  P----ETAAGEVLIFRCPVSSEAVEVINEA
        P    ++ AGEV++FRCP+S+EA E  +EA
Subjt:  P----ETAAGEVLIFRCPVSSEAVEVINEA
XP_004145421.1 CRC domain-containing protein TSO1 [Cucumis sativus]1.0e-2865.15Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP----ANE-GAVTIMDQLLGIFVPEVSPTPTT--
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP     NE GAV IMDQLL IFVPE+ PT +T  
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP----ANE-GAVTIMDQLLGIFVPEVSPTPTT--

Query:  IQPPETA---AGEVLIFRCPVSSEAVEVINEA
        I PPET    AGEV+IF CP+S+EA+E  +EA
Subjt:  IQPPETA---AGEVLIFRCPVSSEAVEVINEA
XP_008449927.1 PREDICTED: CRC domain-containing protein TSO1, partial [Cucumis melo]1.7e-2862.31Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP    NE GAV IMDQLL IFVPE+    T + P
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP

Query:  P----ETAAGEVLIFRCPVSSEAVEVINEA
        P    ++ AGEV++FRCP+S+EA E  +EA
Subjt:  P----ETAAGEVLIFRCPVSSEAVEVINEA
XP_022138353.1 CRC domain-containing protein TSO1-like [Momordica charantia]1.8e-6299.19Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV
        +DSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV

Query:  SSEAVEVINEAEDGNVDKICVSFK
        SSEAVEVINEAEDGNVDKICVSFK
Subjt:  SSEAVEVINEAEDGNVDKICVSFK
XP_038906811.1 protein tesmin/TSO1-like CXC 2 [Benincasa hispida]4.4e-3266.42Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP----------RPNHSIPNPSRSPPA---NEGAVTIMDQLLGIFVPEVSP----TPTTI
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP          RPN S  NPSRSPPA   NEGAV IMDQLL IFVPE+ P    +   I
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP----------RPNHSIPNPSRSPPA---NEGAVTIMDQLLGIFVPEVSP----TPTTI

Query:  QPPETA---AGEVLIFRCPVSSEAVE-VINEAED
        QPPET    AGEVLIFRCP+SSEA++  I+  ED
Subjt:  QPPETA---AGEVLIFRCPVSSEAVE-VINEAED
TrEMBL top hitse value%identityAlignment
A0A0A0LNU4 CRC domain-containing protein4.9e-2965.15Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP----ANE-GAVTIMDQLLGIFVPEVSPTPTT--
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP     NE GAV IMDQLL IFVPE+ PT +T  
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP----ANE-GAVTIMDQLLGIFVPEVSPTPTT--

Query:  IQPPETA---AGEVLIFRCPVSSEAVEVINEA
        I PPET    AGEV+IF CP+S+EA+E  +EA
Subjt:  IQPPETA---AGEVLIFRCPVSSEAVEVINEA
A0A1S3BP37 CRC domain-containing protein TSO18.4e-2962.31Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP    NE GAV IMDQLL IFVPE+    T + P
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP

Query:  P----ETAAGEVLIFRCPVSSEAVEVINEA
        P    ++ AGEV++FRCP+S+EA E  +EA
Subjt:  P----ETAAGEVLIFRCPVSSEAVEVINEA
A0A5D3E4C7 CRC domain-containing protein TSO18.4e-2962.31Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP
        +DSPVFNFIN+LSPIKP+KSIHIT TFN+ISFPSLPVFTSPP           RPN S  NPSRSPP    NE GAV IMDQLL IFVPE+    T + P
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPP-----------RPNHSIPNPSRSPP---ANE-GAVTIMDQLLGIFVPEVSPTPTTIQP

Query:  P----ETAAGEVLIFRCPVSSEAVEVINEA
        P    ++ AGEV++FRCP+S+EA E  +EA
Subjt:  P----ETAAGEVLIFRCPVSSEAVEVINEA
A0A6J1CCS8 CRC domain-containing protein TSO1-like8.9e-6399.19Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV
        +DSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLGIFVPEVSPTPTTIQPPETAAGEVLIFRCPV

Query:  SSEAVEVINEAEDGNVDKICVSFK
        SSEAVEVINEAEDGNVDKICVSFK
Subjt:  SSEAVEVINEAEDGNVDKICVSFK
A0A6J1KE48 protein tesmin/TSO1-like CXC 27.1e-2865.89Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPP---ANEGAVTIMDQLLGIFVPEV-----SPTPTTIQPPETA---
        +DSPVFNFIN+LSPIKPLKSIHIT TFN+ISFPSLPVFTSP RPN   PNPSRS P   +NEGAV IMDQLL IFVPE+     + TP  +QPPET    
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPP---ANEGAVTIMDQLLGIFVPEV-----SPTPTTIQPPETA---

Query:  AGEVLIFRCPVSSEAVEV-INEAEDGNVD
        AGEV      +SSEA+E+  +EAED N D
Subjt:  AGEVLIFRCPVSSEAVEV-INEAEDGNVD
SwissProt top hitse value%identityAlignment
F4JIF5 Protein tesmin/TSO1-like CXC 24.8e-0557.14Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSP
        +DSPVFN+IN+LSPI+P++SI   + F++++F S P VFTSP
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSP
Q9LUI3 CRC domain-containing protein TSO18.2e-0555.32Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPS-LPVFTSPPRPNH
        +DSPVFN+I+ LSPI+ +KSI    TF+++SF S  PVFTSP   +H
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPS-LPVFTSPPRPNH
Arabidopsis top hitse value%identityAlignment
AT3G22760.1 Tesmin/TSO1-like CXC domain-containing protein7.1e-0448.94Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSPPRPNH
        +DSPVF++I  LSPIK +K I IT   +++++ S P VFTSP   +H
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSPPRPNH
AT3G22780.1 Tesmin/TSO1-like CXC domain-containing protein5.8e-0655.32Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPS-LPVFTSPPRPNH
        +DSPVFN+I+ LSPI+ +KSI    TF+++SF S  PVFTSP   +H
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPS-LPVFTSPPRPNH
AT4G14770.1 TESMIN/TSO1-like CXC 23.4e-0657.14Show/hide
Query:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSP
        +DSPVFN+IN+LSPI+P++SI   + F++++F S P VFTSP
Subjt:  KDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLP-VFTSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAACAAGCAACTTTACCGAATTTACGAGGTAAAGGATGAAGTGAACTGTGATTGTGAA
AAGGATTCGCCAGTTTTCAACTTCATAAACACCCTCTCTCCCATCAAGCCTCTGAAATCCATTCACATTACTCACACATTCAATAACATTTCTTTCCCTTCCCTC
CCAGTATTCACTTCCCCACCAAGGCCAAATCACTCAATTCCAAACCCATCGAGATCCCCGCCTGCAAATGAAGGAGCGGTTACAATCATGGACCAGTTACTGGGG
ATTTTCGTGCCGGAAGTTTCTCCAACTCCGACGACGATTCAGCCGCCGGAAACCGCCGCCGGCGAGGTTTTGATATTCCGTTGTCCGGTTAGCTCCGAGGCTGTG
GAGGTGATTAATGAAGCAGAGGATGGCAATGTGGACAAAATTTGTGTTTCGTTTAAGGTAAAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAACAAGCAACTTTACCGAATTTACGAGGTAAAGGATGAAGTGAACTGTGATTGTGAA
AAGGATTCGCCAGTTTTCAACTTCATAAACACCCTCTCTCCCATCAAGCCTCTGAAATCCATTCACATTACTCACACATTCAATAACATTTCTTTCCCTTCCCTC
CCAGTATTCACTTCCCCACCAAGGCCAAATCACTCAATTCCAAACCCATCGAGATCCCCGCCTGCAAATGAAGGAGCGGTTACAATCATGGACCAGTTACTGGGG
ATTTTCGTGCCGGAAGTTTCTCCAACTCCGACGACGATTCAGCCGCCGGAAACCGCCGCCGGCGAGGTTTTGATATTCCGTTGTCCGGTTAGCTCCGAGGCTGTG
GAGGTGATTAATGAAGCAGAGGATGGCAATGTGGACAAAATTTGTGTTTCGTTTAAGGTAAAGTTTTAA
Protein sequenceShow/hide protein sequence
MWEFHSICCGLDDGKTNKQLYRIYEVKDEVNCDCEKDSPVFNFINTLSPIKPLKSIHITHTFNNISFPSLPVFTSPPRPNHSIPNPSRSPPANEGAVTIMDQLLG
IFVPEVSPTPTTIQPPETAAGEVLIFRCPVSSEAVEVINEAEDGNVDKICVSFKVKF