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Moc07g27100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g27100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger protein 5-like
Genome locationchr7:20199040..20206482
RNA-Seq ExpressionMoc07g27100
SyntenyMoc07g27100
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593997.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2662.83Show/hide
Query:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA----DEMYGDNGVD
        A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF ++T PP+          APP  A     E+ G+NGVD
Subjt:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA----DEMYGDNGVD

Query:  LHLTLAPSSGIFC
        LHL+LAPSS IFC
Subjt:  LHLTLAPSSGIFC

KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]8.4e-1548.57Show/hide
Query:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------APPPLADE
        VTA     +      A      KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL         Q  KH R FL+ST P +         APPP    
Subjt:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------APPPLADE

Query:  MYG------------------DNGVDLHLTLAPSSG-IFC
         YG                   NGVDLHL+LAPSSG IFC
Subjt:  MYG------------------DNGVDLHLTLAPSSG-IFC

XP_022138610.1 zinc finger protein 5-like [Momordica charantia]4.4e-56100Show/hide
Query:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH
        VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH
Subjt:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH

Query:  LTLAPSSGIFC
        LTLAPSSGIFC
Subjt:  LTLAPSSGIFC

XP_022930487.1 zinc finger protein 6-like [Cucurbita moschata]5.6e-2764.29Show/hide
Query:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL
        A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          APP  A    E+ G+NGVDL
Subjt:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL

Query:  HLTLAPSSGIFC
        HL+LAPSS IFC
Subjt:  HLTLAPSSGIFC

XP_023514440.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]7.4e-2763.72Show/hide
Query:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA----DEMYGDNGVD
        A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          APP  A     E+ G+NGVD
Subjt:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA----DEMYGDNGVD

Query:  LHLTLAPSSGIFC
        LHL+LAPSS IFC
Subjt:  LHLTLAPSSGIFC

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein4.1e-1548.57Show/hide
Query:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------APPPLADE
        VTA     +      A      KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL         Q  KH R FL+ST P +         APPP    
Subjt:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPA---------APPPLADE

Query:  MYG------------------DNGVDLHLTLAPSSG-IFC
         YG                   NGVDLHL+LAPSSG IFC
Subjt:  MYG------------------DNGVDLHLTLAPSSG-IFC

A0A6J1C9X8 zinc finger protein 5-like2.1e-56100Show/hide
Query:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH
        VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH
Subjt:  VTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLH

Query:  LTLAPSSGIFC
        LTLAPSSGIFC
Subjt:  LTLAPSSGIFC

A0A6J1EQN3 zinc finger protein 6-like2.7e-2764.29Show/hide
Query:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL
        A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          APP  A    E+ G+NGVDL
Subjt:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL

Query:  HLTLAPSSGIFC
        HL+LAPSS IFC
Subjt:  HLTLAPSSGIFC

A0A6J1KF91 zinc finger protein 6-like2.7e-2764.29Show/hide
Query:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL
        A  A  NKD+KRFECQFCGR+FANSQALGGHQNAHKRER LAKQLRFD        NKHPRF +ST PP+          APP  A    E+ G+NGVDL
Subjt:  AAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPRFLSSTLPPA----------APPPLA---DEMYGDNGVDL

Query:  HLTLAPSSGIFC
        HL+LAPSS IFC
Subjt:  HLTLAPSSGIFC

A0A6J1KZQ7 zinc finger protein 6-like1.6e-1455.34Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPAA----PPPLAD------------EMYGD-NGVDLHLTLA
        KRFECQFCGR+FANSQALGGHQNAHKRER LAKQL              PR F + T PP+A    PPP  +            E+ G+ NGVDLHL+LA
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQQNKHPR-FLSSTLPPAA----PPPLAD------------EMYGD-NGVDLHLTLA

Query:  PSS
        PSS
Subjt:  PSS

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 83.9e-0750.88Show/hide
Query:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ
        +D    + N + +RFEC +C R+F  SQALGGHQNAHKRER  AK+    S  H  Q
Subjt:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ

Q39264 Zinc finger protein 54.7e-0866.67Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS
        KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L+  +
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS

Q39265 Zinc finger protein 61.6e-0836.52Show/hide
Query:  VPRQAGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMY
        V  Q+     G+G G+           + +++ECQ+C R+FANSQALGGHQNAHK+ER L K+ +   +    R  N HP   +  L   AP P    + 
Subjt:  VPRQAGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMY

Query:  GDNGVDLHLTLAPSS
               H+ L+PSS
Subjt:  GDNGVDLHLTLAPSS

Q84WI0 Zinc finger protein GIS3.9e-0773.53Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

Q9FG05 Zinc finger protein GIS28.8e-0742.67Show/hide
Query:  AGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN
        A H  + + +    +  + + +  EKRF+C +C R+F  SQALGGHQNAHKRER   K+    SN      RQQN
Subjt:  AGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 53.3e-0966.67Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS
        KR ECQ+CG++FANSQALGGHQNAHK+ER   K+L+  +
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDS

AT1G67030.1 zinc finger protein 61.1e-0936.52Show/hide
Query:  VPRQAGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMY
        V  Q+     G+G G+           + +++ECQ+C R+FANSQALGGHQNAHK+ER L K+ +   +    R  N HP   +  L   AP P    + 
Subjt:  VPRQAGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR-FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMY

Query:  GDNGVDLHLTLAPSS
               H+ L+PSS
Subjt:  GDNGVDLHLTLAPSS

AT2G41940.1 zinc finger protein 82.8e-0850.88Show/hide
Query:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ
        +D    + N + +RFEC +C R+F  SQALGGHQNAHKRER  AK+    S  H  Q
Subjt:  RDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNNHRRQ

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein2.8e-0873.53Show/hide
Query:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ
        +RFEC +C R+F  SQALGGHQNAHKRER LAK+
Subjt:  KRFECQFCGRDFANSQALGGHQNAHKRERHLAKQ

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein6.2e-0842.67Show/hide
Query:  AGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN
        A H  + + +    +  + + +  EKRF+C +C R+F  SQALGGHQNAHKRER   K+    SN      RQQN
Subjt:  AGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLRFDSNN---HRRQQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGTACGGGCGACGTGCATTGCCGAGTCAAGTGAGAATTCCGCTGCAAGTGAACCTCGGTCGAGGAAGAAAGAACCTCGCCTAAGGTCCGACGAAGCCACAAAGGG
GTGCGAAAAGTGGATTGGAGCTAGAGTTCCTCGTCAGGCTGGCCATGTGACGGCTGGAGCTGGTGAGGGAAACGTGCGAGACGCGGCTGCGGCACGTGCGAACAAGGACG
AGAAGAGATTTGAGTGCCAGTTCTGCGGCCGCGACTTCGCCAACTCCCAAGCCCTCGGCGGCCACCAAAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCCGC
TTCGACTCCAATAACCACCGCCGCCAACAAAACAAACACCCACGTTTTCTCTCCTCCACCCTCCCGCCCGCCGCCCCGCCGCCGCTCGCCGACGAAATGTACGGAGATAA
CGGCGTTGATCTCCACCTCACTTTGGCACCCTCCTCCGGGATCTTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACGTACGGGCGACGTGCATTGCCGAGTCAAGTGAGAATTCCGCTGCAAGTGAACCTCGGTCGAGGAAGAAAGAACCTCGCCTAAGGTCCGACGAAGCCACAAAGGG
GTGCGAAAAGTGGATTGGAGCTAGAGTTCCTCGTCAGGCTGGCCATGTGACGGCTGGAGCTGGTGAGGGAAACGTGCGAGACGCGGCTGCGGCACGTGCGAACAAGGACG
AGAAGAGATTTGAGTGCCAGTTCTGCGGCCGCGACTTCGCCAACTCCCAAGCCCTCGGCGGCCACCAAAACGCCCACAAGCGCGAGCGCCACCTCGCCAAACAACTCCGC
TTCGACTCCAATAACCACCGCCGCCAACAAAACAAACACCCACGTTTTCTCTCCTCCACCCTCCCGCCCGCCGCCCCGCCGCCGCTCGCCGACGAAATGTACGGAGATAA
CGGCGTTGATCTCCACCTCACTTTGGCACCCTCCTCCGGGATCTTCTGTTAA
Protein sequenceShow/hide protein sequence
MHVRATCIAESSENSAASEPRSRKKEPRLRSDEATKGCEKWIGARVPRQAGHVTAGAGEGNVRDAAAARANKDEKRFECQFCGRDFANSQALGGHQNAHKRERHLAKQLR
FDSNNHRRQQNKHPRFLSSTLPPAAPPPLADEMYGDNGVDLHLTLAPSSGIFC