; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc07g27710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc07g27710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptiontRNA pseudouridine synthase
Genome locationchr7:20676179..20679791
RNA-Seq ExpressionMoc07g27710
SyntenyMoc07g27710
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02989.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa]2.4e-14378.19Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+ V PP+ +P    I   P+ N ++SS+S  F      +S+  +EPPFP+FKWRLLIAYDGTRYAGWQYQ SPPTIQCL+E+AL  ATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHF+TPFNY SLE+VHAALNGLLP DIRVRE+SPA P FHARFST+SKVYHYKIYN T +DPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAF NAAHN+RV NPVK+IFRFDVIEMGALVQLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDRKELAKYASG PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETS
        L++INY EDHLK PSDCP TS
Subjt:  LMTINYNEDHLKFPSDCPETS

XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]1.8e-14377.85Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+ V PP+ +P+  PI +P  N   ASS+S R  P    +++   EP FP FKWRLLIAYDGTRYAGWQYQ SPPTIQCL+E+AL  ATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHF+TPFNY SLE+VHAALNGLLP DIRVRE+SPA+P FHARFST+SKVYHYKIY+ T +DPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAF NAAHNDRV NPVK+IFRFDVIEMGALVQLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDR+ELAKYASG PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFALT
        L++INY EDHLK PSDCP TSF  T
Subjt:  LMTINYNEDHLKFPSDCPETSFALT

XP_022138364.1 uncharacterized protein LOC111009557 [Momordica charantia]3.0e-19496.49Show/hide
Query:  MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE
        MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE
Subjt:  MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE

Query:  RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA
        RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA
Subjt:  RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA

Query:  VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP
        VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP
Subjt:  VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP

Query:  PQGLCLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        PQGLCLMTINYNEDHLKFPSDCPETSF     +H + +  LP
Subjt:  PQGLCLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

XP_022959477.1 uncharacterized protein LOC111460439 isoform X1 [Cucurbita moschata]1.8e-14375.15Show/hide
Query:  WWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDL
        +W VG+AV P VP  +   I   P+ N  +S T   F      +S+  +EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCLVE+ALT AT+LERKDL
Subjt:  WWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDL

Query:  HLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMRE
        HLVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVRE+SPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+E
Subjt:  HLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMRE

Query:  AANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGL
        AANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +  PPQGL
Subjt:  AANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGL

Query:  CLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        CL+ INY EDHLK PSDCP TSF  +   H + +  LP
Subjt:  CLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

XP_023549334.1 uncharacterized protein LOC111807720 isoform X2 [Cucurbita pepo subsp. pepo]3.7e-14475.67Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+  PI   P+ N  + ST   F      +S+  +EP FP+FKWRL++AYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFANAAHNDRV NPVK++FRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILA+RDRKELAKY +  PP GLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        L+ INY EDHLK PSDCP TSF  +   H + +  LP
Subjt:  LMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

TrEMBL top hitse value%identityAlignment
A0A1S3C7L6 tRNA pseudouridine synthase1.2e-14378.19Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+ V PP+ +P    I   P+ N ++SS+S  F      +S+  +EPPFP+FKWRLLIAYDGTRYAGWQYQ SPPTIQCL+E+AL  ATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHF+TPFNY SLE+VHAALNGLLP DIRVRE+SPA P FHARFST+SKVYHYKIYN T +DPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAF NAAHN+RV NPVK+IFRFDVIEMGALVQLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDRKELAKYASG PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETS
        L++INY EDHLK PSDCP TS
Subjt:  LMTINYNEDHLKFPSDCPETS

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 41.2e-14378.19Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+ V PP+ +P    I   P+ N ++SS+S  F      +S+  +EPPFP+FKWRLLIAYDGTRYAGWQYQ SPPTIQCL+E+AL  ATKLERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHF+TPFNY SLE+VHAALNGLLP DIRVRE+SPA P FHARFST+SKVYHYKIYN T +DPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAF NAAHN+RV NPVK+IFRFDVIEMGALVQLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDRKELAKYASG PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETS
        L++INY EDHLK PSDCP TS
Subjt:  LMTINYNEDHLKFPSDCPETS

A0A6J1C9Y0 tRNA pseudouridine synthase1.4e-19496.49Show/hide
Query:  MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE
        MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE
Subjt:  MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLE

Query:  RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA
        RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA
Subjt:  RKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYA

Query:  VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP
        VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP
Subjt:  VMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAP

Query:  PQGLCLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        PQGLCLMTINYNEDHLKFPSDCPETSF     +H + +  LP
Subjt:  PQGLCLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

A0A6J1H4M7 tRNA pseudouridine synthase8.9e-14475.15Show/hide
Query:  WWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDL
        +W VG+AV P VP  +   I   P+ N  +S T   F      +S+  +EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCLVE+ALT AT+LERKDL
Subjt:  WWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDL

Query:  HLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMRE
        HLVGASRTD GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVRE+SPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+E
Subjt:  HLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMRE

Query:  AANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGL
        AANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +  PPQGL
Subjt:  AANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGL

Query:  CLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        CL+ INY EDHLK PSDCP TSF  +   H + +  LP
Subjt:  CLMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

A0A6J1L2M8 tRNA pseudouridine synthase1.2e-14375.67Show/hide
Query:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
        W VG+AV P VP P+   I     +  + SST   F  +   +S+   EP FP+FKWRL+IAYDGTRYAGWQYQ SPPTIQCL+E+ALT AT+LERKDLH
Subjt:  WVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH

Query:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA
        LVGASRTD+GVHAWGQVAHFITPFNY SL+ +HAALNGLLPADIRVREISPA+P FHARFST+SKVYHYKIYND  LDPF RCYTYHC YKLNYA M+EA
Subjt:  LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC
        ANYF+GKHDFSAFAN AHNDRV NPVK+IFRFDVIEMGAL+QLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +  PPQGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLC

Query:  LMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP
        L+ INY EDHLK PSDCP TSF  +   H + +  LP
Subjt:  LMTINYNEDHLKFPSDCPETSFALTMLQHQIHQRDLP

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A2.3e-4340.64Show/hide
Query:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH
        +L +AYDGT Y G+Q Q      TIQ  +EKAL   + + +  + ++GA RTD GVHA GQV +F +       E    ALN LLP DI+V +       
Subjt:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH

Query:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHARFS ++K Y Y IY+   + PFHR Y YH   +L+   M+E A Y +G +DF +F   A    V + ++ I+R D+IE   ++ L + G+GFLY  V
Subjt:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        R +   LL IG   I P+ + KI+ S++R       + APPQGLCLM + Y
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

B1I1B5 tRNA pseudouridine synthase A5.9e-4441.27Show/hide
Query:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH
        RL +AYDGT Y G+Q Q     PTIQ  +E+ L    +L    L + GASRTD GVHA GQV +F+T       E + AALNG+LP DI   +       
Subjt:  RLLIAYDGTRYAGWQYQESP--PTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPH

Query:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHAR+S ++K Y Y +YN     PF R Y+ H    L+   MR AA + +G+HDFS F  A     V + V+ + R D+     LV+L     GFLY  V
Subjt:  FHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYN
        R M   LL++G E + P+ +P I+AS DR   A+     PP GLCL  + Y+
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYN

Q6MEE7 tRNA pseudouridine synthase A 17.7e-5240Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHF
        ++L IAYDGT Y+GWQ Q +  +IQ  +++AL     L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P  P F
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHF

Query:  HARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVG-NPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV
        H+++S I K YHY ++ +  +DPF R Y++H   K++  ++++AA  F G HDF++FAN AH      NPV+ ++R D+      ++LE EG GFLY+ V
Subjt:  HARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVG-NPVKIIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDH
        RN+V  L+ +       + + +I A+++R++    +  APP+GL L+ + Y  ++
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDH

Q8R7Y7 tRNA pseudouridine synthase A4.5e-4444.35Show/hide
Query:  LLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHA
        L+I YDGT Y GWQYQ++  T+Q ++EKA+ + T    + ++L+G+SRTD GVHA  QVA+F T       E +  ALN +LP D+ V +       FHA
Subjt:  LLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHA

Query:  RFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNM
        R+S  SK Y Y I N  F  P  R Y +H  Y L+   M++AA +F G HDFSAF  A+ N +V NPVK IF   V + G L+++EVE  GFLY  VR +
Subjt:  RFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNM

Query:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        V  L+ +G   I    +P I+ S+DR    K    APPQGL L+ I Y
Subjt:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

Q9PJT0 tRNA pseudouridine synthase A5.9e-4440.78Show/hide
Query:  TFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLE--NVHAALNGLLPADIRVREISP
        T K  L IAY GT Y+GWQYQ +  +IQ ++E   T   K+ R  + ++ + RTD GVHA GQVAHF  P + H  +   +   LN LLP DI +R++  
Subjt:  TFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLE--NVHAALNGLLPADIRVREISP

Query:  AMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFL
            FH+RFS I+K YHY +       P HR + +   +KL    MREAA Y +G HDF++FAN        + V+ ++  D++E   LV +  +G+GFL
Subjt:  AMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFL

Query:  YRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY
        Y+ VRN+V  LL IGK   PP+ + ++L  +DRK   K    APP GL L  + Y
Subjt:  YRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein5.9e-1529.84Show/hide
Query:  LLIAYDGTRYAGWQYQ-ESPPTIQCLVEKALTRATKL--ERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAA-----------------LNG
        L I Y G R+ G+  + +  P+I+  V KAL R   L  ++KD       RTD+GV + GQV          S      A                 LN 
Subjt:  LLIAYDGTRYAGWQYQ-ESPPTIQCLVEKALTRATKL--ERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAA-----------------LNG

Query:  LLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVI---
         LP DIRV   SPA   FHARFS  ++ Y Y  +                   LN + M  A   FIG+HDF  F      +      ++ F F+V    
Subjt:  LLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVI---

Query:  ---EMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY
           E   L    + GS FL+ Q+R MVA+L  IG+     DV+  +L ++      +Y
Subjt:  ---EMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY

AT3G06950.1 Pseudouridine synthase family protein2.8e-11371.64Show/hide
Query:  FKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMP
        +KWRL+IAYDGTR+AGWQYQESPPTIQ ++EKAL + T+L RK+L L+GA RTD GVHAWGQVAHF+TPFNY SL++ HAALNGLLP DIRVRE+S A+P
Subjt:  FKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLHLVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMP

Query:  HFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQ
         FHARFS  SKVY Y+IYNDTF+DPF R + YHCAYKLN + MREAAN F+GKHDFSAFANA   D V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQ
Subjt:  HFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQ

Query:  VRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYAS-GAPPQGLCLMTINYNEDHLKFPSDCPETS
        VRNMVALL+QIGKEA+  D+VP IL ++DR+ LAKY S  A P GLCL+++ Y EDHLK P DCP TS
Subjt:  VRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYAS-GAPPQGLCLMTINYNEDHLKFPSDCPETS

AT5G35400.1 Pseudouridine synthase family protein9.2e-0832.52Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV
        ++++++Y+G  + GWQ Q    T+Q +VEK+L       +A  L++K   L G    A RTD+GV A  QV  F T         +  A+N      +RV
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV

Query:  REISPAMPHFHARFSTISKVYHY
          IS     FH  FS   + Y Y
Subjt:  REISPAMPHFHARFSTISKVYHY

AT5G35400.2 Pseudouridine synthase family protein9.2e-0832.52Show/hide
Query:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV
        ++++++Y+G  + GWQ Q    T+Q +VEK+L       +A  L++K   L G    A RTD+GV A  QV  F T         +  A+N      +RV
Subjt:  WRLLIAYDGTRYAGWQYQESPPTIQCLVEKAL------TRATKLERKDLHLVG----ASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRV

Query:  REISPAMPHFHARFSTISKVYHY
          IS     FH  FS   + Y Y
Subjt:  REISPAMPHFHARFSTISKVYHY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGGTGCTGGTGGGTTGTGGGTGCGGCTGTTCCTCCTCCCGTTCCCGTTCCCGTTCCCGTTCCCATTCACCTCCCTCCGACCAATAATGTCTCTGCATCT
TCCACTTCTCCAAGATTCCAACCAATATGCTGTCGTGAATCTGCACAGCATTCAGAGCCCCCTTTCCCTACCTTTAAATGGCGTTTGCTCATAGCTTATGACGGC
ACCCGATATGCAGGGTGGCAATATCAGGAATCACCACCTACTATCCAGTGCCTCGTTGAAAAAGCCCTGACTCGAGCAACAAAGCTTGAAAGGAAGGATCTTCAC
TTAGTCGGTGCAAGTAGAACAGATAGGGGAGTTCATGCTTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACCATAGCTTGGAAAACGTTCATGCTGCT
CTCAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGATTAGTCCTGCCATGCCTCACTTTCATGCTCGGTTTTCCACCATAAGCAAGGTTTATCACTACAAG
ATATATAATGACACCTTCTTGGATCCGTTTCACCGTTGCTACACTTACCATTGTGCTTATAAACTTAATTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATT
GGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGATCGAGTGGGAAATCCAGTGAAAATCATTTTCCGTTTTGATGTCATAGAAATGGGAGCTCTT
GTTCAGCTAGAAGTTGAGGGCTCAGGTTTTTTGTATAGACAAGTTCGGAATATGGTTGCCTTGTTGCTGCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTT
CCTAAGATTTTGGCTTCTCGAGACCGGAAGGAGCTTGCCAAGTATGCTTCGGGTGCTCCTCCTCAGGGGCTGTGTCTTATGACTATTAATTATAACGAGGACCAT
CTAAAGTTTCCATCTGATTGCCCTGAGACTAGTTTTGCTTTGACGATGCTACAGCATCAGATCCATCAACGGGATTTACCACAAAGCACTCAAGTGCTTGAAGGA
GAAAGAGAAGCTCTCAGTAGGATGGATAAGGAGGAGATTCAAGGAGGAGATTCAGTCCCCAAGAACCCAAAGGACAAAGACAAGCCTCCAGGAGATATTCTTCCC
CACTCCATTTTGGAATCATCCATCCCAGTTGCTCGTGGAAGAAGAATAAGAAGCCCAGAAATCTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGGTGCTGGTGGGTTGTGGGTGCGGCTGTTCCTCCTCCCGTTCCCGTTCCCGTTCCCGTTCCCATTCACCTCCCTCCGACCAATAATGTCTCTGCATCT
TCCACTTCTCCAAGATTCCAACCAATATGCTGTCGTGAATCTGCACAGCATTCAGAGCCCCCTTTCCCTACCTTTAAATGGCGTTTGCTCATAGCTTATGACGGC
ACCCGATATGCAGGGTGGCAATATCAGGAATCACCACCTACTATCCAGTGCCTCGTTGAAAAAGCCCTGACTCGAGCAACAAAGCTTGAAAGGAAGGATCTTCAC
TTAGTCGGTGCAAGTAGAACAGATAGGGGAGTTCATGCTTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACCATAGCTTGGAAAACGTTCATGCTGCT
CTCAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGATTAGTCCTGCCATGCCTCACTTTCATGCTCGGTTTTCCACCATAAGCAAGGTTTATCACTACAAG
ATATATAATGACACCTTCTTGGATCCGTTTCACCGTTGCTACACTTACCATTGTGCTTATAAACTTAATTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATT
GGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAATGATCGAGTGGGAAATCCAGTGAAAATCATTTTCCGTTTTGATGTCATAGAAATGGGAGCTCTT
GTTCAGCTAGAAGTTGAGGGCTCAGGTTTTTTGTATAGACAAGTTCGGAATATGGTTGCCTTGTTGCTGCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTT
CCTAAGATTTTGGCTTCTCGAGACCGGAAGGAGCTTGCCAAGTATGCTTCGGGTGCTCCTCCTCAGGGGCTGTGTCTTATGACTATTAATTATAACGAGGACCAT
CTAAAGTTTCCATCTGATTGCCCTGAGACTAGTTTTGCTTTGACGATGCTACAGCATCAGATCCATCAACGGGATTTACCACAAAGCACTCAAGTGCTTGAAGGA
GAAAGAGAAGCTCTCAGTAGGATGGATAAGGAGGAGATTCAAGGAGGAGATTCAGTCCCCAAGAACCCAAAGGACAAAGACAAGCCTCCAGGAGATATTCTTCCC
CACTCCATTTTGGAATCATCCATCCCAGTTGCTCGTGGAAGAAGAATAAGAAGCCCAGAAATCTGCTGCTGA
Protein sequenceShow/hide protein sequence
MRWCWWVVGAAVPPPVPVPVPVPIHLPPTNNVSASSTSPRFQPICCRESAQHSEPPFPTFKWRLLIAYDGTRYAGWQYQESPPTIQCLVEKALTRATKLERKDLH
LVGASRTDRGVHAWGQVAHFITPFNYHSLENVHAALNGLLPADIRVREISPAMPHFHARFSTISKVYHYKIYNDTFLDPFHRCYTYHCAYKLNYAVMREAANYFI
GKHDFSAFANAAHNDRVGNPVKIIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASGAPPQGLCLMTINYNEDH
LKFPSDCPETSFALTMLQHQIHQRDLPQSTQVLEGEREALSRMDKEEIQGGDSVPKNPKDKDKPPGDILPHSILESSIPVARGRRIRSPEICC