; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g01000 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g01000
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionnuclear transcription factor Y subunit C-1
Genome locationchr8:643675..644097
RNA-Seq ExpressionMoc08g01000
SyntenyMoc08g01000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064731.1 dr1-associated corepressor [Cucumis melo var. makuwa]5.5e-5584.29Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALF+VSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENR R   DK AP GTRRIDDFFR+P KTTS E NES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

XP_008445504.1 PREDICTED: dr1-associated corepressor [Cucumis melo]2.7e-5484.29Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDA 
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENR R   DK AP GTRRIDDFFR+P KTTS E NES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

XP_022132171.1 nuclear transcription factor Y subunit C-1 [Momordica charantia]9.6e-68100Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

XP_022997291.1 DNA polymerase epsilon subunit C [Cucurbita maxima]3.6e-5482.86Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKSAEVA EKKRKTVKLEHIRIAVKRH+ ISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENRTR   DK APEGTRRIDDFFR+P KT S E NE+
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

XP_038884228.1 NCT transcriptional regulatory complex subunit A [Benincasa hispida]2.8e-5989.29Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEESG+AIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIRIAVKRHR ISDFLLDSLPLPPQPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENRTRT  DK  PEGTRRIDDFFR+PAKTTS ENNES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

TrEMBL top hitse value%identityAlignment
A0A1S3BDL4 dr1-associated corepressor1.3e-5484.29Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALFLVSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDA 
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENR R   DK AP GTRRIDDFFR+P KTTS E NES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

A0A5A7VG98 Dr1-associated corepressor2.7e-5584.29Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        M EEESGEAIRPE PTGRVKKIMK+DKD+ KVNSEALF+VSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIR+AVKRHR ISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENR R   DK AP GTRRIDDFFR+P KTTS E NES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

A0A6J1BRI3 nuclear transcription factor Y subunit C-14.7e-68100Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

A0A6J1HCT3 DNA polymerase epsilon subunit C1.1e-5381.43Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKS+EVA EKKRKTVKLEHIRIAVKRH+ I DFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENRTR   DK APEGTRRIDDFFR+P KT S E NE+
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

A0A6J1K737 DNA polymerase epsilon subunit C1.7e-5482.86Show/hide
Query:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP
        MAEEE GEAIRPE P GR+KKIMK+DKD+ KVNSEALFLVSCAT+LFL+LLAEKSAEVA EKKRKTVKLEHIRIAVKRH+ ISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAP

Query:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES
        AK+ENRTR   DK APEGTRRIDDFFR+P KT S E NE+
Subjt:  AKNENRTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES

SwissProt top hitse value%identityAlignment
A6BLW4 Nuclear transcription factor Y subunit C-21.9e-0537.97Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   +  A+ R   + DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

Q9FMV5 Nuclear transcription factor Y subunit C-48.3e-0640.51Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I  A+ R   I DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

Q9SMP0 Nuclear transcription factor Y subunit C-18.3e-0640.51Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I  A+ R   I DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

Q9W256 DNA polymerase epsilon subunit 45.4e-0533.33Show/hide
Query:  EAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAV
        EA   ++P  R++ IMK+D D+   N+EA+F+V+ A +LF+  L+ +S     + K+KT++   + +A+
Subjt:  EAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAV

Q9ZVL3 Nuclear transcription factor Y subunit C-37.1e-0538.46Show/hide
Query:  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        +P  R+KKIMK D+DV  +++EA  + + A ++F+  L  +S     E KR+T++   I  AV R   I DFL+D +P
Subjt:  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

Arabidopsis top hitse value%identityAlignment
AT1G08970.4 nuclear factor Y, subunit C95.0e-0638.46Show/hide
Query:  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        +P  R+KKIMK D+DV  +++EA  + + A ++F+  L  +S     E KR+T++   I  AV R   I DFL+D +P
Subjt:  IPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

AT3G48590.1 nuclear factor Y, subunit C15.9e-0740.51Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I  A+ R   I DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

AT5G43250.1 nuclear factor Y, subunit C133.9e-3563.24Show/hide
Query:  EEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAK
        EEE G +IRPE P GRVKKIMK+DKD+ K+NSEAL +++ +T+LFL  LAEKSA V  EKKRKTV L+H+RIAVKRH+P SDFLLDSLPLP QP      
Subjt:  EEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAK

Query:  NENRTRTAADK---AAPEGTRRIDDFFRK-PAKTTS
            T++ +DK   A P GTRRIDDFF K  AKT S
Subjt:  NENRTRTAADK---AAPEGTRRIDDFFRK-PAKTTS

AT5G63470.1 nuclear factor Y, subunit C45.9e-0740.51Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I  A+ R   I DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP

AT5G63470.2 nuclear factor Y, subunit C45.9e-0740.51Show/hide
Query:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP
        ++P  R+KKIMK D+DV  +++EA  L + A +LF+  L  +S   A E KR+T++   I  A+ R   I DFL+D +P
Subjt:  EIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGAAGAGTCCGGGGAGGCTATCCGTCCCGAAATTCCGACCGGACGAGTCAAGAAGATAATGAAGGTGGACAAGGACGTATGCAAAGTGAACTCTGAA
GCACTATTTCTTGTCTCATGCGCCACCGATCTCTTCCTGAAGCTTCTCGCTGAAAAGTCTGCAGAAGTCGCCACGGAGAAGAAACGGAAGACAGTTAAGCTTGAA
CACATCCGAATCGCCGTCAAAAGGCATCGACCGATCAGTGATTTTCTCCTCGATTCGCTACCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGAACGAGAAT
CGCACCCGCACTGCCGCCGACAAAGCAGCTCCCGAGGGAACCCGTCGAATCGACGATTTCTTTCGCAAGCCAGCGAAGACAACGTCGGATGAGAACAACGAGTCG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAGAAGAGTCCGGGGAGGCTATCCGTCCCGAAATTCCGACCGGACGAGTCAAGAAGATAATGAAGGTGGACAAGGACGTATGCAAAGTGAACTCTGAA
GCACTATTTCTTGTCTCATGCGCCACCGATCTCTTCCTGAAGCTTCTCGCTGAAAAGTCTGCAGAAGTCGCCACGGAGAAGAAACGGAAGACAGTTAAGCTTGAA
CACATCCGAATCGCCGTCAAAAGGCATCGACCGATCAGTGATTTTCTCCTCGATTCGCTACCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGAACGAGAAT
CGCACCCGCACTGCCGCCGACAAAGCAGCTCCCGAGGGAACCCGTCGAATCGACGATTTCTTTCGCAAGCCAGCGAAGACAACGTCGGATGAGAACAACGAGTCG
TAG
Protein sequenceShow/hide protein sequence
MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVATEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNEN
RTRTAADKAAPEGTRRIDDFFRKPAKTTSDENNES