; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g01010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g01010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription and mRNA export factor ENY2
Genome locationchr8:646114..648856
RNA-Seq ExpressionMoc08g01010
SyntenyMoc08g01010
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020143.1 Transcription and mRNA export factor SUS1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-5293.39Show/hide
Query:  RLQSAGESL-GRASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        RLQSAGESL  R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Subjt:  RLQSAGESL-GRASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV

Query:  PDSVKAELLQRIRSFLGSTAI
        PDSVKAELLQRIR+FL STAI
Subjt:  PDSVKAELLQRIRSFLGSTAI

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]3.1e-4995.45Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPE EDDR+ Q TFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFLGSTAI
Subjt:  IRSFLGSTAI

XP_022131273.1 transcription and mRNA export factor SUS1 [Momordica charantia]4.0e-52100Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFLGSTAI
Subjt:  IRSFLGSTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]4.1e-4995.45Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFL STAI
Subjt:  IRSFLGSTAI

XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]9.2e-4994.55Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IR+FL STAI
Subjt:  IRSFLGSTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY21.5e-4995.45Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPE EDDR+ Q TFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFLGSTAI
Subjt:  IRSFLGSTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY27.6e-4994.55Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPE EDDR+ Q TFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFL STAI
Subjt:  IRSFLGSTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY21.9e-52100Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFLGSTAI
Subjt:  IRSFLGSTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY22.0e-4995.45Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IRSFL STAI
Subjt:  IRSFLGSTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY24.4e-4994.55Show/hide
Query:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLGSTAI
        IR+FL STAI
Subjt:  IRSFLGSTAI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY25.1e-2664.21Show/hide
Query:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        ++D Q+  + TIN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q3ZBJ0 Transcription and mRNA export factor ENY21.5e-2563.16Show/hide
Query:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        ++D Q+  +  IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q6NQ54 Transcription and mRNA export factor ENY21.7e-3462.5Show/hide
Query:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D  D     ++T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRSFLGSTAI
         RI++F+ S A+
Subjt:  QRIRSFLGSTAI

Q9JIX0 Transcription and mRNA export factor ENY21.5e-2563.16Show/hide
Query:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        ++D Q+  +  IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Q9NPA8 Transcription and mRNA export factor ENY21.5e-2563.16Show/hide
Query:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA
        ++D Q+  +  IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FL   A
Subjt:  DRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).1.2e-3562.5Show/hide
Query:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D  D     ++T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRSFLGSTAI
         RI++F+ S A+
Subjt:  QRIRSFLGSTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.8e-2658.24Show/hide
Query:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        S+NRPPTP+ +D  D     ++T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  SINRPPTPEAEDDRD----QQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAAGATCACCGACTTGTCGGCTCCAGTCAGCAGGTGAGTCTCTCGGGAGGGCTTCCATTAATCGACCTCCGACGCCCGAAGCCGAGGATGATCGAGATCAGCA
GCTTACTTTTCAAGAAACAATCAATATCAAGCTGATTGAAAGTGGCGAAAAAGAGCGGCTCAAAGAGCTCTTGAGAGAGAGGCTTATCGAATGCGGATGGAAAGATGAAA
TGAAAGCCCTTTGCAGGGCATATGTAAGGAAGAAGGGAAGGAACAATGTCAGTGTCGACGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCCGATTCA
GTGAAAGCTGAGCTGCTGCAGCGGATCCGATCTTTCCTAGGATCAACAGCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAAGATCACCGACTTGTCGGCTCCAGTCAGCAGGTGAGTCTCTCGGGAGGGCTTCCATTAATCGACCTCCGACGCCCGAAGCCGAGGATGATCGAGATCAGCA
GCTTACTTTTCAAGAAACAATCAATATCAAGCTGATTGAAAGTGGCGAAAAAGAGCGGCTCAAAGAGCTCTTGAGAGAGAGGCTTATCGAATGCGGATGGAAAGATGAAA
TGAAAGCCCTTTGCAGGGCATATGTAAGGAAGAAGGGAAGGAACAATGTCAGTGTCGACGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCCGATTCA
GTGAAAGCTGAGCTGCTGCAGCGGATCCGATCTTTCCTAGGATCAACAGCCATCTGA
Protein sequenceShow/hide protein sequence
MSTRSPTCRLQSAGESLGRASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDS
VKAELLQRIRSFLGSTAI