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Moc08g01210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g01210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:763574..763852
RNA-Seq ExpressionMoc08g01210
SyntenyMoc08g01210
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]3.4e-2160.44Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADP
        ME+YL + R  L  F+ Y I Q+PRS+NSN+DALA+LAS Y+TDL R+VPVEIL   SI +P++MEI+S  P+WM+PIK FL  G VPADP
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADP

XP_022152233.1 uncharacterized protein LOC111020002 [Momordica charantia]5.8e-2163.33Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPAD
        ME+YL++ R  LTQFE Y + QVPRSENSNADALA+LAS Y+TDL R+VPVEIL   SI  PEVMEI++  P+WMDPI  F + G  P D
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPAD

XP_022156792.1 uncharacterized protein LOC111023626 [Momordica charantia]1.3e-3381.52Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        M+RYLA+ RGLL QFEDYVI+QVPRS+NSNADALARLAS Y+TDLPRTVPVEIL +SSIDQPE++EI SAQPTW+DPIK FLV+GSV ADPS
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]1.1e-3585.87Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        MERYLA+ R LL QFEDYVIRQVPRSENSNAD LARLAS YDTDLPRTVPVEIL +SS+DQPE+MEI SAQPTWMDPIK FLV+GSVPADPS
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

XP_022158215.1 uncharacterized protein LOC111024751 [Momordica charantia]1.9e-2473.81Show/hide
Query:  RGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        RGL ++   Y   +VPRSENSNADALA LAS Y+TDLPRTVPVEIL +SSIDQPE+M+I SA+PTWMDPIK FLV+GS+PADPS
Subjt:  RGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

TrEMBL top hitse value%identityAlignment
A0A6J1CP53 Ribonuclease H1.6e-2160.44Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADP
        ME+YL + R  L  F+ Y I Q+PRS+NSN+DALA+LAS Y+TDL R+VPVEIL   SI +P++MEI+S  P+WM+PIK FL  G VPADP
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADP

A0A6J1DEB3 uncharacterized protein LOC1110200022.8e-2163.33Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPAD
        ME+YL++ R  LTQFE Y + QVPRSENSNADALA+LAS Y+TDL R+VPVEIL   SI  PEVMEI++  P+WMDPI  F + G  P D
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPAD

A0A6J1DSX0 uncharacterized protein LOC1110236266.5e-3481.52Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        M+RYLA+ RGLL QFEDYVI+QVPRS+NSNADALARLAS Y+TDLPRTVPVEIL +SSIDQPE++EI SAQPTW+DPIK FLV+GSV ADPS
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

A0A6J1DV78 Ribonuclease H9.3e-2573.81Show/hide
Query:  RGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        RGL ++   Y   +VPRSENSNADALA LAS Y+TDLPRTVPVEIL +SSIDQPE+M+I SA+PTWMDPIK FLV+GS+PADPS
Subjt:  RGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

A0A6J1DWM2 Ribonuclease H5.3e-3685.87Show/hide
Query:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS
        MERYLA+ R LL QFEDYVIRQVPRSENSNAD LARLAS YDTDLPRTVPVEIL +SS+DQPE+MEI SAQPTWMDPIK FLV+GSVPADPS
Subjt:  MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGTATCTGGCCGAAACCCGAGGGCTCCTCACCCAGTTTGAGGACTATGTGATTCGACAGGTGCCGAGGTCTGAAAACTCCAACGCCGACGCACTGGCTCGCCT
CGCCTCGGTATACGATACCGATCTACCAAGAACGGTTCCAGTTGAAATACTTCCTAAGTCGTCCATCGACCAACCTGAGGTGATGGAGATCGAGTCAGCTCAGCCTACAT
GGATGGACCCAATTAAAGGCTTCCTGGTCAGTGGCTCAGTCCCCGCCGATCCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGTATCTGGCCGAAACCCGAGGGCTCCTCACCCAGTTTGAGGACTATGTGATTCGACAGGTGCCGAGGTCTGAAAACTCCAACGCCGACGCACTGGCTCGCCT
CGCCTCGGTATACGATACCGATCTACCAAGAACGGTTCCAGTTGAAATACTTCCTAAGTCGTCCATCGACCAACCTGAGGTGATGGAGATCGAGTCAGCTCAGCCTACAT
GGATGGACCCAATTAAAGGCTTCCTGGTCAGTGGCTCAGTCCCCGCCGATCCGAGCTAG
Protein sequenceShow/hide protein sequence
MERYLAETRGLLTQFEDYVIRQVPRSENSNADALARLASVYDTDLPRTVPVEILPKSSIDQPEVMEIESAQPTWMDPIKGFLVSGSVPADPS