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Moc08g01970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g01970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationchr8:1337950..1340283
RNA-Seq ExpressionMoc08g01970
SyntenyMoc08g01970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598673.1 hypothetical protein SDJN03_08451, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5787.05Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDDFHTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKN+ES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        LP S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

XP_022131442.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Momordica charantia]9.8e-71100Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL
        MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL
Subjt:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL

Query:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
Subjt:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

XP_022997135.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita maxima]3.6e-5787.05Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDD HTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        LP S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

XP_023522203.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita pepo subsp. pepo]8.0e-5787.14Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDDFHTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPS-SGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        LP  S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPS-SGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

XP_023546708.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita pepo subsp. pepo]8.0e-5787.14Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDDFHTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPS-SGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        LP  S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPS-SGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

TrEMBL top hitse value%identityAlignment
A0A1S3BCG7 uncharacterized WD repeat-containing protein C2A9.03-like5.1e-5784.89Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        MEHFQNDDL YIVDDYYEVD F DG  FSDD+FHT+Q+ EH+DSDFEDDI  DT+TP+TDTSALD RNGKDIQGIPWERFTFTRDNYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        L SS  ELEKECLQVEKGN+FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

A0A5A7VES3 Putative WD repeat-containing protein C2A9.03-like5.1e-5784.89Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        MEHFQNDDL YIVDDYYEVD F DG  FSDD+FHT+Q+ EH+DSDFEDDI  DT+TP+TDTSALD RNGKDIQGIPWERFTFTRDNYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        L SS  ELEKECLQVEKGN+FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

A0A6J1BTD8 uncharacterized WD repeat-containing protein C2A9.03-like isoform X14.7e-71100Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL
        MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL
Subjt:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL

Query:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
Subjt:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

A0A6J1HE57 uncharacterized WD repeat-containing protein C2A9.03-like isoform X18.7e-5786.33Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDDFHTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKN+ES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        L  S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

A0A6J1K8Q7 uncharacterized WD repeat-containing protein C2A9.03-like isoform X11.7e-5787.05Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        ME FQNDDLAYIVDDY+EV DF DG FFSDDD HTDQS EHIDSDFEDDI  DTSTP+TDTSALDARNGKDIQGIPWERFTFTR+NYRE RLSQYKNYES
Subjt:  MEHFQNDDLAYIVDDYYEVDDF-DGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        LP S  ELEKECL+VEKGN FYDFQFNTR+VKSTIVHFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36070.1 Transducin/WD40 repeat-like superfamily protein1.3e-2564Show/hide
Query:  DSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL--PSSGVELEKECLQ-VEKGNNFYDFQFNTRVVKSTIVHFQ
        DSDFED  D +T   +TDTSA +ARNGKDIQGI WE F + RD +RE RL QY N+ ++  PSS  +L+KE  Q VEKG NFYDFQFNTR+V STIVHFQ
Subjt:  DSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL--PSSGVELEKECLQ-VEKGNNFYDFQFNTRVVKSTIVHFQ

AT1G36070.2 Transducin/WD40 repeat-like superfamily protein1.7e-2564Show/hide
Query:  DSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL--PSSGVELEKECLQ-VEKGNNFYDFQFNTRVVKSTIVHFQ
        DSDFEDD +T     +TDTSA +ARNGKDIQGI WE F + RD +RE RL QY N+ ++  PSS  +L+KE  Q VEKG NFYDFQFNTR+V STIVHFQ
Subjt:  DSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL--PSSGVELEKECLQ-VEKGNNFYDFQFNTRVVKSTIVHFQ

AT1G55680.1 Transducin/WD40 repeat-like superfamily protein1.2e-2646.43Show/hide
Query:  MEHFQNDDLAYI--VDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYE
        M ++Q DD  Y+  VDD  + DD D DF  DD   +D  ++  D          ++    DTSA  AR GKDIQGIPW+R + TR+ YR+ RL QYKNYE
Subjt:  MEHFQNDDLAYI--VDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYE

Query:  SLPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        ++P+SG    K+C+  +KG  FYDF  NTR +KS+I+HFQ
Subjt:  SLPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

AT1G78070.1 Transducin/WD40 repeat-like superfamily protein7.1e-3558.27Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDFDGDF-FSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES
        M+ F N DL Y+VD+++   DFD D  F + D  ++   + +DSDF  D +   S    +TSAL+ARNGKDIQGIPWE   +TRD YRE RL  YKN+ES
Subjt:  MEHFQNDDLAYIVDDYYEVDDFDGDF-FSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYES

Query:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        L  S  EL+KECLQVEKG NFYDFQFNTR+VKSTI HFQ
Subjt:  LPSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ

AT5G56190.2 Transducin/WD40 repeat-like superfamily protein3.9e-2547.1Show/hide
Query:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL
        M  +  DDL    +D Y  D++D D   +DD +       ID+   +  D D      DTSA  ARNGKDIQGIPW+  T TR +YR+ RL QYKNYE++
Subjt:  MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESL

Query:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ
        P+SG E  K+C+  EKG++FY+F+ N+R V+STI+HFQ
Subjt:  PSSGVELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATTTTCAGAACGACGATCTTGCATATATTGTAGATGACTACTATGAAGTGGATGATTTTGATGGTGATTTTTTCTCTGATGACGACTTCCATACTGAT
CAAAGTATCGAGCACATAGACTCGGACTTTGAGGATGATATCGATACAGATACAAGCACACCGAAGACGGATACCTCTGCCTTGGACGCTAGGAATGGGAAAGAC
ATCCAGGGAATACCTTGGGAGAGGTTTACTTTTACCAGAGATAATTATCGGGAAAAGCGTTTGAGCCAGTACAAGAACTATGAGAGCCTGCCAAGTTCTGGTGTG
GAACTGGAAAAGGAATGCTTGCAAGTGGAGAAGGGGAATAACTTCTATGACTTTCAGTTCAATACGAGGGTGGTTAAATCAACAATTGTTCATTTTCAGCATTTA
ATGCAGAGTGGAAGTTATATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATTTTCAGAACGACGATCTTGCATATATTGTAGATGACTACTATGAAGTGGATGATTTTGATGGTGATTTTTTCTCTGATGACGACTTCCATACTGAT
CAAAGTATCGAGCACATAGACTCGGACTTTGAGGATGATATCGATACAGATACAAGCACACCGAAGACGGATACCTCTGCCTTGGACGCTAGGAATGGGAAAGAC
ATCCAGGGAATACCTTGGGAGAGGTTTACTTTTACCAGAGATAATTATCGGGAAAAGCGTTTGAGCCAGTACAAGAACTATGAGAGCCTGCCAAGTTCTGGTGTG
GAACTGGAAAAGGAATGCTTGCAAGTGGAGAAGGGGAATAACTTCTATGACTTTCAGTTCAATACGAGGGTGGTTAAATCAACAATTGTTCATTTTCAGCATTTA
ATGCAGAGTGGAAGTTATATCTGA
Protein sequenceShow/hide protein sequence
MEHFQNDDLAYIVDDYYEVDDFDGDFFSDDDFHTDQSIEHIDSDFEDDIDTDTSTPKTDTSALDARNGKDIQGIPWERFTFTRDNYREKRLSQYKNYESLPSSGV
ELEKECLQVEKGNNFYDFQFNTRVVKSTIVHFQHLMQSGSYI