CuGenDBv2

Gene ID	Moc08g03880
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Serine/arginine repetitive matrix protein 2
Genome location	chr8:2862093..2862489
RNA-Seq Expression	Moc08g03880
Synteny	Moc08g03880
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7029765.1 Serine/arginine repetitive matrix protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

XP_008445109.1 PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]

1.6e-12

40.29

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV ES RGFEE +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL
             + DG              ++HQIAARKEEQMKTL
Subjt:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL

XP_022929608.1 dentin sialophosphoprotein-like [Cucurbita moschata]

4.2e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

XP_022997381.1 dentin sialophosphoprotein-like [Cucurbita maxima]

4.2e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

XP_023545728.1 protein starmaker-like [Cucurbita pepo subsp. pepo]

4.2e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ00 cwf21 domain-containing protein

7.6e-13

40.29

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV ES RGFEE +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL
             + DG              ++HQIAARKEEQMKTL
Subjt:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL

A0A1S3BBX0 dentin sialophosphoprotein-like

7.6e-13

40.29

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV ES RGFEE +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL
             + DG              ++HQIAARKEEQMKTL
Subjt:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL

A0A5A7VCH8 Dentin sialophosphoprotein-like

7.6e-13

40.29

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV ES RGFEE +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL
             + DG              ++HQIAARKEEQMKTL
Subjt:  CDTGRQSDG-------------PRSHQIAARKEEQMKTL

A0A6J1ESM6 dentin sialophosphoprotein-like

2.0e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

A0A6J1K7B6 dentin sialophosphoprotein-like

2.0e-13

37.2

Show/hide

Query:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA
        MYNG GL+TP           NKFFVRPKTGKV E+ RGF+E +GTAG+S KPN+D+    R +                             AR+  +A
Subjt:  MYNGTGLETP-----------NKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-----------------------------ARDGSQA

Query:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS
             + DGP             +SHQIAARKEEQMKTL     R A+    ++D  ++  G+S
Subjt:  CDTGRQSDGP-------------RSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49601.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

4.3e-08

31.65

Show/hide

Query:  MYNGTGLET-----------PNKFFVRPKT-GKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-------------ARDGSQACDTGRQSDGPR--SH
        MYNG GL+T            NKFFVRP+  GK  + G+GFE+ EGTAG+S KPN+ +    R +             A  G    +  ++ +  R    
Subjt:  MYNGTGLET-----------PNKFFVRPKT-GKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSK-------------ARDGSQACDTGRQSDGPR--SH

Query:  QIAARKEEQMKTLLSNWKRH--AIMEERNDDDYKMLIGL
          AA  EE+  + +SN + H  A  +E+  + ++  +GL
Subjt:  QIAARKEEQMKTLLSNWKRH--AIMEERNDDDYKMLIGL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATAACGGTACAGGGTTAGAGACGCCGAACAAGTTCTTCGTGAGGCCGAAGACGGGAAAGGTTGGTGAAAGCGGGAGAGGATTCGAAGAAGGCGAAGGCACCGCCGG
CATTTCCGTAAAACCTAACAGAGATGTATATCCTGGAACACGATCGAAAGCGCGAGATGGAAGTCAAGCTTGTGATACTGGAAGACAATCCGATGGACCAAGGAGCCACC
AAATTGCTGCTAGAAAGGAGGAGCAGATGAAAACATTGCTCTCGAACTGGAAAAGGCATGCAATAATGGAAGAACGGAATGATGATGACTACAAAATGCTAATAGGGCTT
TCAAAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYNGTGLETPNKFFVRPKTGKVGESGRGFEEGEGTAGISVKPNRDVYPGTRSKARDGSQACDTGRQSDGPRSHQIAARKEEQMKTLLSNWKRHAIMEERNDDDYKMLIGL
SK

Moc08g03880 (gene) of Bitter gourd (OHB3-1) v2 genome