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Moc08g04110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g04110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr8:3026005..3026633
RNA-Seq ExpressionMoc08g04110
SyntenyMoc08g04110
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131652.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]3.6e-2193.22Show/hide
Query:  MGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL
        MGEGDDE EYGNEYASDRLDVQHEHE+V IHNTMAEYPVD VHEMASNRVTGQSEGDRL
Subjt:  MGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL

XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]5.4e-1757.32Show/hide
Query:  PYFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHE
        PY+ H+GHDIA LTPL S+VVPCNLGDDR  DW+VPGLWN ++   ++SDESY P+ +  EGD E E+ N+   D LD + E
Subjt:  PYFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHE

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]5.5e-1444.07Show/hide
Query:  YFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEH--EQVIIHNTMAEYPVDA
        Y+GH+GHDIA LTPL S+VVPCNLGDDR   W++PGLWN ++   ++SDESY  +    EGD E E+ N+   D  D + E   EQV +     E     
Subjt:  YFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEH--EQVIIHNTMAEYPVDA

Query:  VHEMASNRVTGQSEGDRL
        V +M  + + GQ   ++L
Subjt:  VHEMASNRVTGQSEGDRL

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]4.4e-1144.44Show/hide
Query:  NVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL
        NVVPCNLGDDR  DWDVPG+WN +E   ++S ESY P+ +  EG  + EYGNE   D LD + E +   +H T      +AV     N +TG    ++L
Subjt:  NVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]1.2e-1646.85Show/hide
Query:  GHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASN
        GHD+  LTPLGS+VVPCNLGDDR  DWDVPG+WN +E   ++S ESY P+    EG  + EYGNE   D LD + E +   +H T      +AV     N
Subjt:  GHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASN

Query:  RVTGQSEGDRL
         +TG    ++L
Subjt:  RVTGQSEGDRL

TrEMBL top hitse value%identityAlignment
A0A6J1BRM2 protein FAR1-RELATED SEQUENCE 4-like1.7e-2193.22Show/hide
Query:  MGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL
        MGEGDDE EYGNEYASDRLDVQHEHE+V IHNTMAEYPVD VHEMASNRVTGQSEGDRL
Subjt:  MGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL

A0A6J1DN26 uncharacterized protein LOC1110220902.6e-1757.32Show/hide
Query:  PYFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHE
        PY+ H+GHDIA LTPL S+VVPCNLGDDR  DW+VPGLWN ++   ++SDESY P+ +  EGD E E+ N+   D LD + E
Subjt:  PYFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHE

A0A6J1DP00 uncharacterized protein LOC1110229542.7e-1444.07Show/hide
Query:  YFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEH--EQVIIHNTMAEYPVDA
        Y+GH+GHDIA LTPL S+VVPCNLGDDR   W++PGLWN ++   ++SDESY  +    EGD E E+ N+   D  D + E   EQV +     E     
Subjt:  YFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEH--EQVIIHNTMAEYPVDA

Query:  VHEMASNRVTGQSEGDRL
        V +M  + + GQ   ++L
Subjt:  VHEMASNRVTGQSEGDRL

A0A6J1DQB9 Reverse transcriptase2.1e-1144.44Show/hide
Query:  NVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL
        NVVPCNLGDDR  DWDVPG+WN +E   ++S ESY P+ +  EG  + EYGNE   D LD + E +   +H T      +AV     N +TG    ++L
Subjt:  NVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL

A0A6J1DTG5 uncharacterized protein LOC1110238435.8e-1746.85Show/hide
Query:  GHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASN
        GHD+  LTPLGS+VVPCNLGDDR  DWDVPG+WN +E   ++S ESY P+    EG  + EYGNE   D LD + E +   +H T      +AV     N
Subjt:  GHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEGDDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASN

Query:  RVTGQSEGDRL
         +TG    ++L
Subjt:  RVTGQSEGDRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAACTGACGACGATGACCTGACTTTCTTCTTGACTGGTGAAGATGTCTCTGAATTGACGCTATACATATCTACCGTGCCAAAGAAGTTCGTCAGTTCCGTCCT
CGTCGTCGAACCCCTCTTCTTCCCGCCCACCACCCCCTACTTTGGTCATATTGGTCATGATATAGCATCTCTCACACCGTTAGGGTCAAATGTTGTTCCTTGTAATTTGG
GAGATGATAGGGCATATGATTGGGATGTGCCTGGCTTGTGGAATGGAAGTGAAAATGTGGATGAAGATAGTGATGAATCATATCGTCCAATGACCGACATGGGAGAAGGA
GACGACGAAGGGGAATATGGAAATGAGTACGCAAGTGATCGACTTGACGTGCAACATGAGCATGAACAGGTAATAATTCATAATACAATGGCTGAATATCCTGTAGACGC
CGTCCATGAAATGGCAAGCAATAGAGTCACCGGTCAGTCAGAAGGTGATAGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAACTGACGACGATGACCTGACTTTCTTCTTGACTGGTGAAGATGTCTCTGAATTGACGCTATACATATCTACCGTGCCAAAGAAGTTCGTCAGTTCCGTCCT
CGTCGTCGAACCCCTCTTCTTCCCGCCCACCACCCCCTACTTTGGTCATATTGGTCATGATATAGCATCTCTCACACCGTTAGGGTCAAATGTTGTTCCTTGTAATTTGG
GAGATGATAGGGCATATGATTGGGATGTGCCTGGCTTGTGGAATGGAAGTGAAAATGTGGATGAAGATAGTGATGAATCATATCGTCCAATGACCGACATGGGAGAAGGA
GACGACGAAGGGGAATATGGAAATGAGTACGCAAGTGATCGACTTGACGTGCAACATGAGCATGAACAGGTAATAATTCATAATACAATGGCTGAATATCCTGTAGACGC
CGTCCATGAAATGGCAAGCAATAGAGTCACCGGTCAGTCAGAAGGTGATAGATTGTAA
Protein sequenceShow/hide protein sequence
MEITDDDDLTFFLTGEDVSELTLYISTVPKKFVSSVLVVEPLFFPPTTPYFGHIGHDIASLTPLGSNVVPCNLGDDRAYDWDVPGLWNGSENVDEDSDESYRPMTDMGEG
DDEGEYGNEYASDRLDVQHEHEQVIIHNTMAEYPVDAVHEMASNRVTGQSEGDRL