; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g04860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g04860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr8:3473757..3476700
RNA-Seq ExpressionMoc08g04860
SyntenyMoc08g04860
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-15094.46Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]2.5e-15899.27Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ +
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]2.5e-15094.1Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRPVGAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LPDTQAGFFDLIN+YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]7.2e-15094.46Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

XP_023538244.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]2.1e-14994.1Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVD+FNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

TrEMBL top hitse value%identityAlignment
A0A6J1BRI8 Poly(A)-specific ribonuclease1.2e-15899.27Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ +
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV

A0A6J1BVW9 Poly(A)-specific ribonuclease1.2e-15094.1Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRPVGAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LPDTQAGFFDLIN+YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

A0A6J1GJJ8 Poly(A)-specific ribonuclease3.5e-15094.46Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

A0A6J1KLE0 Poly(A)-specific ribonuclease3.5e-15094.46Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

B9RNX3 Poly(A)-specific ribonuclease5.1e-14992.25Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSI+PKG+SIHIREVW+ NLEEEF L+REIVDQFNY+AMDTEFPGVVLRPVG FKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNE+GIDVNRF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLIN YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLRD FFNGST+KYAGVLYGLGVENGQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

SwissProt top hitse value%identityAlignment
Q08BM8 CCR4-NOT transcription complex subunit 79.7e-8155.76Show/hide
Query:  SIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S  I EVW  NLEEE   +R++  +FNYIAMDTEFPGVV RP+G F++  +Y YQ L+ NVD+LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCN
        +ED++A DSIELL   GI FKK+ EEGI+   FAELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD +  FF+++ ++FP++YD+K+LMK C 
Subjt:  SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCN

Query:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG
        +  GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG     V+NG
Subjt:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.9e-12275.84Show/hide
Query:  KGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVWD+NL EEFAL+REIVD+F+YIAMDTEFPGVVL+PV  FK  N+ NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK
        FNI EDI+AS+SIELLRQCGIDFKKN E+GIDV RF EL+MSSGIVLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G   T
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT

Q9S9P2 Probable CCR4-associated factor 1 homolog 26.7e-9862.27Show/hide
Query:  ESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNIN------EYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVW+HNLE+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      EYNY TLK NV+MLKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNIN------EYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIK
        NFREFN+  D+FA DSIELLR+  ID +KNNE G+D  RFAELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+  + FFD +  +FP+VYDIK
Subjt:  NFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIK

Query:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT
        +LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL  +N +++T
Subjt:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.0e-12273.9Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  L+R++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ+
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI

Q9SKZ2 Probable CCR4-associated factor 1 homolog 79.9e-12675.91Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E AL+RE+VD F ++AMDTEFPG+V RPVG FK   EY+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD
        QFNFREF++  DI+A+DSIELLRQ GIDF KNNE GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LP+TQ GFF++I++YFP VYD
Subjt:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQIV
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-12473.9Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  L+R++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ+
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-12473.9Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  L+R++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ+
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQI

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-12273.98Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  L+R++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.0e-12775.91Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E AL+RE+VD F ++AMDTEFPG+V RPVG FK   EY+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD
        QFNFREF++  DI+A+DSIELLRQ GIDF KNNE GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LP+TQ GFF++I++YFP VYD
Subjt:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQIV
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIV

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-12375.84Show/hide
Query:  KGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVWD+NL EEFAL+REIVD+F+YIAMDTEFPGVVL+PV  FK  N+ NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK
        FNI EDI+AS+SIELLRQCGIDFKKN E+GIDV RF EL+MSSGIVLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G   T
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCGAAAGGTGAGTCGATTCATATCCGTGAGGTTTGGGACCATAATTTGGAGGAGGAGTTTGCTCTATTACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGACACCGAGTTCCCCGGCGTGGTGCTTCGCCCTGTGGGTGCGTTTAAGAATATCAATGAATATAACTATCAAACTCTCAAGGACAACGTCGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGTAATCTTCCAACGTGTGGAACGGATAAGTTTTGCATATGGCAGTTCAATTTCCGCGAATTCAACATCAGTGAA
GATATTTTTGCGAGTGATTCTATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGCTGAGCTTCTAATGTC
TTCTGGGATTGTGTTGAACGATACCGTTAACTGGGTGACGTTCCATAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTGACTTGTCGAAGCTTACCAGACACACAGG
CAGGATTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAATAGTTTTCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGAAAGTTAAGGGATACATTTTTCAATGGATCGACACAGAA
ATACGCAGGTGTTTTATATGGTCTTGGTGTTGAGAATGGACAGATTGTTACAAACTTGACATGGCTGACCCTAATTATCAATCCAAAACTCGCTCATCCTATCCTCTTCT
CGCCTGGATACCAGGAGTTGGGGAATATTCTGTCCATAACACAAATTGAGATGAGACCGAGGGAGGAGACAGTGGGTGTAGTTTACAAAAGCGGGACTCATACTTCCAAT
AGTGTAAAGAGCGATTTGGTTCTCGAACCAATGGCTGTGACTCAAGAACGCTGCAGCTCGGGAGTCACTAGGCAACTCCCCACATTTGGGGGAAGGGGGATTGGATCATC
CATTGGTTGTATCGAGTCTTCAAAGTTAGGAAGAGGAGCTGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCGAAAGGTGAGTCGATTCATATCCGTGAGGTTTGGGACCATAATTTGGAGGAGGAGTTTGCTCTATTACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGACACCGAGTTCCCCGGCGTGGTGCTTCGCCCTGTGGGTGCGTTTAAGAATATCAATGAATATAACTATCAAACTCTCAAGGACAACGTCGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGTAATCTTCCAACGTGTGGAACGGATAAGTTTTGCATATGGCAGTTCAATTTCCGCGAATTCAACATCAGTGAA
GATATTTTTGCGAGTGATTCTATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGCTGAGCTTCTAATGTC
TTCTGGGATTGTGTTGAACGATACCGTTAACTGGGTGACGTTCCATAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTGACTTGTCGAAGCTTACCAGACACACAGG
CAGGATTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAATAGTTTTCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGAAAGTTAAGGGATACATTTTTCAATGGATCGACACAGAA
ATACGCAGGTGTTTTATATGGTCTTGGTGTTGAGAATGGACAGATTGTTACAAACTTGACATGGCTGACCCTAATTATCAATCCAAAACTCGCTCATCCTATCCTCTTCT
CGCCTGGATACCAGGAGTTGGGGAATATTCTGTCCATAACACAAATTGAGATGAGACCGAGGGAGGAGACAGTGGGTGTAGTTTACAAAAGCGGGACTCATACTTCCAAT
AGTGTAAAGAGCGATTTGGTTCTCGAACCAATGGCTGTGACTCAAGAACGCTGCAGCTCGGGAGTCACTAGGCAACTCCCCACATTTGGGGGAAGGGGGATTGGATCATC
CATTGGTTGTATCGAGTCTTCAAAGTTAGGAAGAGGAGCTGTTTTCTGA
Protein sequenceShow/hide protein sequence
MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISE
DIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQIVTNLTWLTLIINPKLAHPILFSPGYQELGNILSITQIEMRPREETVGVVYKSGTHTSN
SVKSDLVLEPMAVTQERCSSGVTRQLPTFGGRGIGSSIGCIESSKLGRGAVF