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Moc08g04960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g04960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAutophagy-related 18
Genome locationchr8:3583307..3583985
RNA-Seq ExpressionMoc08g04960
SyntenyMoc08g04960
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY29324.1 Uncharacterized protein TCM_036899 [Theobroma cacao]2.7e-1157.5Show/hide
Query:  KMKRASIGSR-KSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHD
        KMKRAS+ SR +   V EE +AR K+Q LLQ+FLE+QK+FVSKK+KLQ + Q++ETL AEVRFLRQR  YL  +++++++
Subjt:  KMKRASIGSR-KSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHD

KAG6772902.1 hypothetical protein POTOM_024331 [Populus tomentosa]2.7e-1156.41Show/hide
Query:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ
        MS++  KR ++ S +S  V+E +  R KYQ LL+DFLE+QKDFVSKKRKL+ + Q++E L AEVRFLRQR E+  K+Q
Subjt:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ

OMO90686.1 Ubiquitin [Corchorus olitorius]2.1e-1155.29Show/hide
Query:  MKRASIGSRKS-AIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDL
        MKRASI SR+    V EE++AR K+Q LLQ+FLE+QK+FV KKRKLQ ++Q++ETL AEV+FLRQR  YL  +++++++ + +DL
Subjt:  MKRASIGSRKS-AIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDL

XP_022132126.1 uncharacterized protein LOC111005070 [Momordica charantia]1.2e-62100Show/hide
Query:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD
        MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD
Subjt:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD

Query:  GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS
        GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS
Subjt:  GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS

XP_038884216.1 uncharacterized protein LOC120075114 isoform X1 [Benincasa hispida]1.2e-1461.54Show/hide
Query:  ESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLDGV
        ESKMK      R S I H     R K ++ L   LE+QK+ VSK RKL+VL+QRKETL  EV FLR+RL YLQKLQNR HD   E+LPMVLE+KQNLDGV
Subjt:  ESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLDGV

Query:  EEEK
        EE+K
Subjt:  EEEK

TrEMBL top hitse value%identityAlignment
A0A061GQB7 Uncharacterized protein1.3e-1157.5Show/hide
Query:  KMKRASIGSR-KSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHD
        KMKRAS+ SR +   V EE +AR K+Q LLQ+FLE+QK+FVSKK+KLQ + Q++ETL AEVRFLRQR  YL  +++++++
Subjt:  KMKRASIGSR-KSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHD

A0A1R3J7E0 Ubiquitin1.0e-1155.29Show/hide
Query:  MKRASIGSRKS-AIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDL
        MKRASI SR+    V EE++AR K+Q LLQ+FLE+QK+FV KKRKLQ ++Q++ETL AEV+FLRQR  YL  +++++++ + +DL
Subjt:  MKRASIGSRKS-AIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDL

A0A2K2A8R5 Uncharacterized protein1.7e-1155.7Show/hide
Query:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQN
        MS++  KR ++ S +S  V E +  R KYQ LL+DFLE+QKDFVSKKRKL+ + Q++E L AEVRFLRQR E+  K+Q+
Subjt:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQN

A0A6J1BRD5 uncharacterized protein LOC1110050705.7e-63100Show/hide
Query:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD
        MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD
Subjt:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLD

Query:  GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS
        GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS
Subjt:  GVEEEKFQNKALGINKMVGKIKTLGQARDINSVPS

A0A6M2FAA9 Uncharacterized protein1.7e-1156.41Show/hide
Query:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ
        MS++  KR ++ S +S  V+E +  R KYQ LL+DFLE+QKDFVSKKRKL+ + Q++E L AEVRFLRQR E+  K+Q
Subjt:  MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57910.1 unknown protein3.5e-0439.66Show/hide
Query:  EESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ
        E+ + R ++  L+QD+ E+  +  + +++LQ +R+RK TL AEVRFLR+R  +L++ Q
Subjt:  EESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAGTCTAAGATGAAGAGAGCGTCGATCGGTTCTCGTAAATCCGCCATTGTTCATGAAGAATCGGAAGCAAGGCGTAAATATCAAATTCTGCTGCAAGAT
TTCTTGGAAGTCCAGAAGGATTTTGTTTCGAAGAAGAGAAAATTGCAGGTTCTAAGACAGAGGAAGGAGACTCTTGGAGCAGAAGTTAGATTTTTGAGACAAAGG
CTCGAATATCTGCAGAAGTTGCAGAATCGTAAACATGATTCAATTTCAGAGGACCTGCCCATGGTTTTGGAAACGAAGCAGAATCTGGATGGTGTGGAAGAGGAG
AAGTTTCAGAATAAGGCCTTAGGCATCAACAAAATGGTGGGAAAAATTAAAACTTTAGGGCAAGCGCGAGATATTAACTCGGTTCCTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAGTCTAAGATGAAGAGAGCGTCGATCGGTTCTCGTAAATCCGCCATTGTTCATGAAGAATCGGAAGCAAGGCGTAAATATCAAATTCTGCTGCAAGAT
TTCTTGGAAGTCCAGAAGGATTTTGTTTCGAAGAAGAGAAAATTGCAGGTTCTAAGACAGAGGAAGGAGACTCTTGGAGCAGAAGTTAGATTTTTGAGACAAAGG
CTCGAATATCTGCAGAAGTTGCAGAATCGTAAACATGATTCAATTTCAGAGGACCTGCCCATGGTTTTGGAAACGAAGCAGAATCTGGATGGTGTGGAAGAGGAG
AAGTTTCAGAATAAGGCCTTAGGCATCAACAAAATGGTGGGAAAAATTAAAACTTTAGGGCAAGCGCGAGATATTAACTCGGTTCCTTCGTGA
Protein sequenceShow/hide protein sequence
MSESKMKRASIGSRKSAIVHEESEARRKYQILLQDFLEVQKDFVSKKRKLQVLRQRKETLGAEVRFLRQRLEYLQKLQNRKHDSISEDLPMVLETKQNLDGVEEE
KFQNKALGINKMVGKIKTLGQARDINSVPS