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Moc08g07370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g07370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionmetalloendoproteinase 1-like
Genome locationchr8:5402183..5404998
RNA-Seq ExpressionMoc08g07370
SyntenyMoc08g07370
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR024079 - Metallopeptidase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133615.1 metalloendoproteinase 1-like [Momordica charantia]1.8e-1976.19Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGH
        DVKISFER DHGDG PF  P ILAH+F+PTDGRLH NVDQNW WG V  + DVQTV LHELGH
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGH

XP_022134247.1 metalloendoproteinase 3-MMP-like [Momordica charantia]1.9e-1871.88Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF  P  LAH+F+PTDGRLH N+D NW WG V  + DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

XP_022134250.1 metalloendoproteinase 3-MMP-like [Momordica charantia]1.9e-1871.88Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF  P  LAH+F+PTDGRLH N+D NW WG V  + DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

XP_022134260.1 metalloendoproteinase 1-like [Momordica charantia]2.1e-2076.56Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF GP IL H+FFP DGRLH N DQNW WG V  S DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

XP_022134769.1 metalloendoproteinase 1-like [Momordica charantia]1.3e-2277.14Show/hide
Query:  DVKISFERRDHGDGVPFCGPILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHICLHLSRN
        +VKI FE+ DHGD VPFC PILAHSFF TD RLHFNVDQNWAWG V G+VDVQTV LHELGHI L L+ N
Subjt:  DVKISFERRDHGDGVPFCGPILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHICLHLSRN

TrEMBL top hitse value%identityAlignment
A0A6J1BVR8 metalloendoproteinase 1-like8.5e-2076.19Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGH
        DVKISFER DHGDG PF  P ILAH+F+PTDGRLH NVDQNW WG V  + DVQTV LHELGH
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGH

A0A6J1BXR0 metalloendoproteinase 3-MMP-like9.4e-1971.88Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF  P  LAH+F+PTDGRLH N+D NW WG V  + DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

A0A6J1BXS7 metalloendoproteinase 1-like1.0e-2076.56Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF GP IL H+FFP DGRLH N DQNW WG V  S DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

A0A6J1BZ43 metalloendoproteinase 3-MMP-like9.4e-1971.88Show/hide
Query:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        DVKISFER DHGDG PF  P  LAH+F+PTDGRLH N+D NW WG V  + DVQTV LHELGHI
Subjt:  DVKISFERRDHGDGVPFCGP-ILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

A0A6J1BZQ4 metalloendoproteinase 1-like6.3e-2377.14Show/hide
Query:  DVKISFERRDHGDGVPFCGPILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHICLHLSRN
        +VKI FE+ DHGD VPFC PILAHSFF TD RLHFNVDQNWAWG V G+VDVQTV LHELGHI L L+ N
Subjt:  DVKISFERRDHGDGVPFCGPILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHICLHLSRN

SwissProt top hitse value%identityAlignment
D0EM77 Karilysin3.5e-1045.83Show/hide
Query:  DVKISFERRDHGDGVPFCG--PILAHSFFPTD------GRLHFNVDQNWAWGVVTGS-VDVQTVVLHELGHI
        D+KI +E+ +HGDG PF G   ILAH+F+P        G LHF+ D+NW+   + GS +D+ TV  HE+GH+
Subjt:  DVKISFERRDHGDGVPFCG--PILAHSFFPTD------GRLHFNVDQNWAWGVVTGS-VDVQTVVLHELGHI

O23507 Metalloendoproteinase 1-MMP1.3e-0941.89Show/hide
Query:  FKHMDVKISFERRDHGDGVPFCGPI--LAHSFFPTDGRLHFNVDQNW-----AWGVVTGSVDVQTVVLHELGHI
        F   D+KI F   DHGDG+PF G +  LAH+F P +GRLH +  + W       G    +VD+++V  HE+GH+
Subjt:  FKHMDVKISFERRDHGDGVPFCGPI--LAHSFFPTDGRLHFNVDQNW-----AWGVVTGSVDVQTVVLHELGHI

P29136 Metalloendoproteinase 12.4e-1141.33Show/hide
Query:  FKHMDVKISFERRDHGDGVPFCGP--ILAHSFFPTDGRLHFNVDQNW------AWGVVTGSVDVQTVVLHELGHI
        ++  ++KI F  ++HGD  PF GP  IL H+F PTDGR HF+ D+ W          VT + D+++V +HE+GH+
Subjt:  FKHMDVKISFERRDHGDGVPFCGP--ILAHSFFPTDGRLHFNVDQNW------AWGVVTGSVDVQTVVLHELGHI

Q02853 Stromelysin-36.5e-0945.59Show/hide
Query:  DVKISFERRDHGDGVPFCGP--ILAHSFFP---TDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI
        D+ I F R  HGD +PF GP  ILAH+FFP    +G +HF+ D+ W  G   G+ D+  V  HE GH+
Subjt:  DVKISFERRDHGDGVPFCGP--ILAHSFFP---TDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHI

Q8GWW6 Metalloendoproteinase 4-MMP1.3e-0943.48Show/hide
Query:  DVKISFERRDHGDGVPFCG--PILAHSFFPTDGRLHFNVDQNWAWGV----VTGSVDVQTVVLHELGHI
        D+KI F   DHGDG PF G   +LAH+F P +GRLH +  + WA        + +VD+++V +HE+GH+
Subjt:  DVKISFERRDHGDGVPFCG--PILAHSFFPTDGRLHFNVDQNWAWGV----VTGSVDVQTVVLHELGHI

Arabidopsis top hitse value%identityAlignment
AT2G45040.1 Matrixin family protein9.3e-1143.48Show/hide
Query:  DVKISFERRDHGDGVPFCG--PILAHSFFPTDGRLHFNVDQNWAWGV----VTGSVDVQTVVLHELGHI
        D+KI F   DHGDG PF G   +LAH+F P +GRLH +  + WA        + +VD+++V +HE+GH+
Subjt:  DVKISFERRDHGDGVPFCG--PILAHSFFPTDGRLHFNVDQNWAWGV----VTGSVDVQTVVLHELGHI

AT4G16640.1 Matrixin family protein9.3e-1141.89Show/hide
Query:  FKHMDVKISFERRDHGDGVPFCGPI--LAHSFFPTDGRLHFNVDQNW-----AWGVVTGSVDVQTVVLHELGHI
        F   D+KI F   DHGDG+PF G +  LAH+F P +GRLH +  + W       G    +VD+++V  HE+GH+
Subjt:  FKHMDVKISFERRDHGDGVPFCGPI--LAHSFFPTDGRLHFNVDQNW-----AWGVVTGSVDVQTVVLHELGHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTAAACACATGGACGTGAAAATCAGCTTCGAGAGACGGGACCATGGCGATGGGGTGCCTTTTTGTGGGCCCATTTTGGCGCACTCTTTCTTCCCAACGGATGG
GAGACTTCACTTCAATGTGGACCAAAATTGGGCGTGGGGGGTTGTGACTGGTTCAGTGGATGTGCAGACAGTGGTTCTGCATGAACTTGGACATATTTGCCTACATTTGT
CCAGGAACCACCAAGTGCATGATTTGTTTCTTAACGAGGTGACCAAAAGTTTCTCGGCTGGTCGTGTCTCGTGTGATGTGGGTATGTTCCATTTGCTGGAGGCCGGCAGG
TTCTTGGAGAAGGCAGTTATTGCAGAATCTGCTCTGCTTCTTCTCTCTTCATTTGGATACTTGGATCACATTCAACTGATCGGTTTGCCTATTGATTTGAGTTTGGCTGA
AATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTTAAACACATGGACGTGAAAATCAGCTTCGAGAGACGGGACCATGGCGATGGGGTGCCTTTTTGTGGGCCCATTTTGGCGCACTCTTTCTTCCCAACGGATGG
GAGACTTCACTTCAATGTGGACCAAAATTGGGCGTGGGGGGTTGTGACTGGTTCAGTGGATGTGCAGACAGTGGTTCTGCATGAACTTGGACATATTTGCCTACATTTGT
CCAGGAACCACCAAGTGCATGATTTGTTTCTTAACGAGGTGACCAAAAGTTTCTCGGCTGGTCGTGTCTCGTGTGATGTGGGTATGTTCCATTTGCTGGAGGCCGGCAGG
TTCTTGGAGAAGGCAGTTATTGCAGAATCTGCTCTGCTTCTTCTCTCTTCATTTGGATACTTGGATCACATTCAACTGATCGGTTTGCCTATTGATTTGAGTTTGGCTGA
AATGTAA
Protein sequenceShow/hide protein sequence
MLFKHMDVKISFERRDHGDGVPFCGPILAHSFFPTDGRLHFNVDQNWAWGVVTGSVDVQTVVLHELGHICLHLSRNHQVHDLFLNEVTKSFSAGRVSCDVGMFHLLEAGR
FLEKAVIAESALLLLSSFGYLDHIQLIGLPIDLSLAEM