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Moc08g08920 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g08920
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationchr8:6634106..6634465
RNA-Seq ExpressionMoc08g08920
SyntenyMoc08g08920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]2.7e-3465.35Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF    G+A  Q R R  SP+SI +LC H+QDP      S+E +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WMSMPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3370.16Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC--RHSQDP---SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAV
        MAALSAGHRHFF     A Q   R  SP+ IVLLC   H+QDP   SEE +K+ +E KQ  + GF++R++KMGMELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC--RHSQDP---SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAV

Query:  YVYISQKIVCAYFVWMSMPKQQLW
        YVYISQKIVCAYF+WMSMPK QLW
Subjt:  YVYISQKIVCAYFVWMSMPKQQLW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3673.77Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ------DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFA
        MAALSAGHR+FF  G+AA   R R  SP+SIVLLC H+Q      DPSEE  K+ E+ K+Q I GFV+RFEKMG+ELKEKLSPQRKGDWKD+ LMSLSFA
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQ------DPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFA

Query:  VYVYISQKIVCAYFVWMSMPKQ
        VYVYISQKIVCAYFVWMSMPKQ
Subjt:  VYVYISQKIVCAYFVWMSMPKQ

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]1.0e-3364.57Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF  + G+A    R R  SP+SI +LC H+QDP      SEE +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WM+MPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]5.9e-58100Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
        MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS

Query:  QKIVCAYFVWMSMPKQQLW
        QKIVCAYFVWMSMPKQQLW
Subjt:  QKIVCAYFVWMSMPKQQLW

TrEMBL top hitse value%identityAlignment
A0A059ADD2 Uncharacterized protein2.1e-2152.5Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC----RHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVY
        MA+ S  H +F  R  A Q+L+    S   I + C    R   DP+ +  K+ ++ K+    G VE FEK+G  LK  L PQRKGDWKD+ALMSLSFAVY
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLC----RHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVY

Query:  VYISQKIVCAYFVWMSMPKQ
        VYISQKIVCAY  W+SMPKQ
Subjt:  VYISQKIVCAYFVWMSMPKQ

A0A0A0LD14 Uncharacterized protein4.9e-3464.57Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF  + G+A    R R  SP+SI +LC H+QDP      SEE +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WM+MPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

A0A5B7BW37 Uncharacterized protein3.1e-2053.78Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHS---QDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYV
        MAALS GH  F +R ++ Q+L+ + +    I + C+       PS E  KE E+ K+Q +  F    EK+G  LKE LSP++KGDWKDV LMSLSFAVYV
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHS---QDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYV

Query:  YISQKIVCAYFVWMSMPKQ
        YISQKIVCAY  WMSM KQ
Subjt:  YISQKIVCAYFVWMSMPKQ

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase1.3e-3465.35Show/hide
Query:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS
        MAALSAGHRHFF    G+A  Q R R  SP+SI +LC H+QDP      S+E +K+  + +++ + GFV+RFEKMG++LKEKLSPQRKGDWKD+ LMSLS
Subjt:  MAALSAGHRHFF--RRGAAAQQLRTRRSSPKSIVLLCRHSQDP------SEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQQLW
        FAVYVYISQKIVCAYF+WMSMPK  LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQQLW

A0A6J1DGN1 uncharacterized protein LOC1110203152.8e-58100Show/hide
Query:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
        MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS
Subjt:  MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYIS

Query:  QKIVCAYFVWMSMPKQQLW
        QKIVCAYFVWMSMPKQQLW
Subjt:  QKIVCAYFVWMSMPKQQLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein4.1e-0941.41Show/hide
Query:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK
        +Q  +R       V+ CR  + P     +E E   Q+ +   +    K+G  LK +   ++KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK

AT3G52070.2 unknown protein4.1e-0941.41Show/hide
Query:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK
        +Q  +R       V+ CR  + P     +E E   Q+ +   +    K+G  LK +   ++KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  QQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCGGCGCCGCCGCCCAGCAGCTCAGAACCAGACGCAGCAGCCCCAAATCGATCGTCCTCCTCTGCCGCCA
CAGCCAAGATCCTTCAGAAGAAAACTCGAAGGAAGGGGAAGAAAGAAAGCAGCAGAAGATTGGAGGGTTTGTTGAGCGATTTGAGAAGATGGGAATGGAATTGAAGGAGA
AATTGAGCCCTCAGAGAAAAGGGGACTGGAAAGATGTGGCATTGATGAGCTTATCTTTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTGTGCGCTTATTTTGTTTGG
ATGTCAATGCCAAAGCAACAACTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCGGCGCCGCCGCCCAGCAGCTCAGAACCAGACGCAGCAGCCCCAAATCGATCGTCCTCCTCTGCCGCCA
CAGCCAAGATCCTTCAGAAGAAAACTCGAAGGAAGGGGAAGAAAGAAAGCAGCAGAAGATTGGAGGGTTTGTTGAGCGATTTGAGAAGATGGGAATGGAATTGAAGGAGA
AATTGAGCCCTCAGAGAAAAGGGGACTGGAAAGATGTGGCATTGATGAGCTTATCTTTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTGTGCGCTTATTTTGTTTGG
ATGTCAATGCCAAAGCAACAACTATGGTAG
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFRRGAAAQQLRTRRSSPKSIVLLCRHSQDPSEENSKEGEERKQQKIGGFVERFEKMGMELKEKLSPQRKGDWKDVALMSLSFAVYVYISQKIVCAYFVW
MSMPKQQLW