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Moc08g09230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g09230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionmyb family transcription factor PHL5-like
Genome locationchr8:6883669..6885731
RNA-Seq ExpressionMoc08g09230
SyntenyMoc08g09230
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048301.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]8.2e-2855Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+ SSSF SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQ +    L H
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

TYK10646.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]8.2e-2855Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+ SSSF SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQ +    L H
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

XP_022152692.1 myb family transcription factor PHL5-like [Momordica charantia]4.9e-6594.78Show/hide
Query:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
        MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
Subjt:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS

Query:  KTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KTRVKWTEELHQKFVDCVNRLGGAQ +    L H
Subjt:  KTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

XP_022934744.1 myb family transcription factor PHL5-like isoform X1 [Cucurbita moschata]2.6e-2956.03Show/hide
Query:  DEMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRK
        +++LMSD NG   L+   SP LD Y FEG + FSEAE    SSF SS+ +DDQ HLH SS +FDS +HQG  + QSS C EF+G+ SW WEEL  NEN+K
Subjt:  DEMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRK

Query:  PKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
         KS + SK R+KWTEELHQKF++CV++LGG Q +    L H
Subjt:  PKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

XP_022982577.1 myb family transcription factor PHL5-like isoform X1 [Cucurbita maxima]9.1e-2758.4Show/hide
Query:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE
        L SP LD Y FEG + FSEAE    SSF SS+ +DDQHHL  SS +FDS +HQG  + QSS CQE NG+ SW WEEL  NEN+K KS +  K R+KWTEE
Subjt:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE

Query:  LHQKFVDCVNRLGGAQSSKEFDLSH
        LHQKF++CV++LGG Q +    L H
Subjt:  LHQKFVDCVNRLGGAQSSKEFDLSH

TrEMBL top hitse value%identityAlignment
A0A5A7U415 Protein PHR1-LIKE 1-like4.0e-2855Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+ SSSF SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQ +    L H
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

A0A5D3CJQ9 Protein PHR1-LIKE 1-like4.0e-2855Show/hide
Query:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP
        +++M+++N F PL+   SPF D Y FEG   FSE     DSSFA S+I D QHH H+ SSSF SP  Q  + QSS  QEF+GEH SW  EEL  N N+K 
Subjt:  EMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHV-SSSFDSPQHQGTRGQSSNCQEFNGEH-SWPWEELTENENRKP

Query:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KS +VSKTR+KWTE+LHQKF++CV++LGGAQ +    L H
Subjt:  KSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

A0A6J1DGZ3 myb family transcription factor PHL5-like2.4e-6594.78Show/hide
Query:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
        MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS
Subjt:  MLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVS

Query:  KTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
        KTRVKWTEELHQKFVDCVNRLGGAQ +    L H
Subjt:  KTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

A0A6J1F3G0 myb family transcription factor PHL5-like isoform X11.2e-2956.03Show/hide
Query:  DEMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRK
        +++LMSD NG   L+   SP LD Y FEG + FSEAE    SSF SS+ +DDQ HLH SS +FDS +HQG  + QSS C EF+G+ SW WEEL  NEN+K
Subjt:  DEMLMSDFNGFYPLA---SPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRK

Query:  PKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH
         KS + SK R+KWTEELHQKF++CV++LGG Q +    L H
Subjt:  PKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQSSKEFDLSH

A0A6J1J569 myb family transcription factor PHL5-like isoform X24.4e-2758.4Show/hide
Query:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE
        L SP LD Y FEG + FSEAE    SSF SS+ +DDQHHL  SS +FDS +HQG  + QSS CQE NG+ SW WEEL  NEN+K KS +  K R+KWTEE
Subjt:  LASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSS-SFDSPQHQG-TRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTRVKWTEE

Query:  LHQKFVDCVNRLGGAQSSKEFDLSH
        LHQKF++CV++LGG Q +    L H
Subjt:  LHQKFVDCVNRLGGAQSSKEFDLSH

SwissProt top hitse value%identityAlignment
Q0WVU3 Myb family transcription factor PHL51.2e-0565.52Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS
        V+KTR++WT++LH+KFV+CVNRLGGA  +
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS

Arabidopsis top hitse value%identityAlignment
AT2G01060.1 myb-like HTH transcriptional regulator family protein3.0e-0452.78Show/hide
Query:  ENENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGG
        E +N  P S   SK R++WT ELH++FVD V +LGG
Subjt:  ENENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGG

AT3G04450.1 Homeodomain-like superfamily protein1.8e-0445.95Show/hide
Query:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQ
        N    P S + SK R++WT ELH+ FV+ +N+LGG++
Subjt:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQ

AT3G04450.2 Homeodomain-like superfamily protein1.8e-0445.95Show/hide
Query:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQ
        N    P S + SK R++WT ELH+ FV+ +N+LGG++
Subjt:  NENRKPKSIVVSKTRVKWTEELHQKFVDCVNRLGGAQ

AT5G06800.1 myb-like HTH transcriptional regulator family protein8.5e-0765.52Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS
        V+KTR++WT++LH+KFV+CVNRLGGA  +
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS

AT5G06800.2 myb-like HTH transcriptional regulator family protein8.5e-0765.52Show/hide
Query:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS
        V+KTR++WT++LH+KFV+CVNRLGGA  +
Subjt:  VSKTRVKWTEELHQKFVDCVNRLGGAQSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGTGGAATGATGAAATGTTGATGAGTGATTTCAATGGGTTTTATCCACTCGCGTCGCCGTTTCTTGATCTCTATGCCTTTGAGGGCTACGATGCGTTTTCAGA
AGCCGAGTCTCACTTTGATTCTTCGTTTGCATCCTCCAGCATTCAAGATGATCAACATCACCTACATGTCTCGTCTTCTTTTGACTCACCACAACATCAAGGAACTCGAG
GTCAGTCGAGCAATTGCCAAGAATTCAATGGTGAGCACTCCTGGCCATGGGAGGAGTTGACTGAAAACGAGAATAGAAAGCCAAAATCAATAGTCGTTTCAAAGACGCGA
GTTAAATGGACTGAGGAACTTCACCAGAAATTCGTCGACTGCGTCAATCGACTCGGAGGTGCTCAAAGTTCAAAAGAATTTGATCTCAGCCATGGAAGAACAAATGAAGC
AACTAAGAGGAATTTTAGATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGTGGAATGATGAAATGTTGATGAGTGATTTCAATGGGTTTTATCCACTCGCGTCGCCGTTTCTTGATCTCTATGCCTTTGAGGGCTACGATGCGTTTTCAGA
AGCCGAGTCTCACTTTGATTCTTCGTTTGCATCCTCCAGCATTCAAGATGATCAACATCACCTACATGTCTCGTCTTCTTTTGACTCACCACAACATCAAGGAACTCGAG
GTCAGTCGAGCAATTGCCAAGAATTCAATGGTGAGCACTCCTGGCCATGGGAGGAGTTGACTGAAAACGAGAATAGAAAGCCAAAATCAATAGTCGTTTCAAAGACGCGA
GTTAAATGGACTGAGGAACTTCACCAGAAATTCGTCGACTGCGTCAATCGACTCGGAGGTGCTCAAAGTTCAAAAGAATTTGATCTCAGCCATGGAAGAACAAATGAAGC
AACTAAGAGGAATTTTAGATCATAG
Protein sequenceShow/hide protein sequence
MNLWNDEMLMSDFNGFYPLASPFLDLYAFEGYDAFSEAESHFDSSFASSSIQDDQHHLHVSSSFDSPQHQGTRGQSSNCQEFNGEHSWPWEELTENENRKPKSIVVSKTR
VKWTEELHQKFVDCVNRLGGAQSSKEFDLSHGRTNEATKRNFRS