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Moc08g09860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g09860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUbiquitin-like protein ATG12
Genome locationchr8:7309956..7311781
RNA-Seq ExpressionMoc08g09860
SyntenyMoc08g09860
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000422 - autophagy of mitochondrion (biological process)
GO:0006501 - C-terminal protein lipidation (biological process)
GO:0044804 - autophagy of nucleus (biological process)
GO:0034045 - phagophore assembly site membrane (cellular component)
GO:0034274 - Atg12-Atg5-Atg16 complex (cellular component)
InterPro domainsIPR007242 - Ubiquitin-like protein Atg12
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151012.1 ubiquitin-like protein ATG12 [Cucumis sativus]4.7e-4294.74Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        M S ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

XP_008464001.1 PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]1.1e-4193.68Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        M S ESS+S RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

XP_022153405.1 ubiquitin-like protein ATG12 [Momordica charantia]9.2e-46100Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

XP_022955552.1 ubiquitin-like protein ATG12 [Cucurbita moschata]1.5e-4091.58Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MAS ESSSS +KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

XP_038878493.1 ubiquitin-like protein ATG12 [Benincasa hispida]1.6e-4295.79Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MAS ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

TrEMBL top hitse value%identityAlignment
A0A0A0LIA6 Ubiquitin-like protein ATG122.3e-4294.74Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        M S ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

A0A1S3CKI1 Ubiquitin-like protein ATG125.1e-4293.68Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        M S ESS+S RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

A0A6J1DGR5 Ubiquitin-like protein ATG124.5e-46100Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

A0A6J1GTZ1 Ubiquitin-like protein ATG127.4e-4191.58Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MAS ESSSS +KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

A0A6J1J054 Ubiquitin-like protein ATG129.6e-4190.53Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MAS ESS+S +KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

SwissProt top hitse value%identityAlignment
A2YAG8 Ubiquitin-like protein ATG124.8e-2964.04Show/hide
Query:  SSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE + DLY+NFGIDG+LVVNYA SMAWG
Subjt:  SSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

Q1SF86 Ubiquitin-like protein ATG121.2e-3575.79Show/hide
Query:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MA+ ES +S RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VNSAFSP PDE V DLY+NFG DGKLVVNYACSMAWG
Subjt:  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

Q69NP0 Ubiquitin-like protein ATG124.8e-2964.04Show/hide
Query:  SSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE + DLY+NFGIDG+LVVNYA SMAWG
Subjt:  SSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

Q8S924 Ubiquitin-like protein ATG12A5.8e-3576.04Show/hide
Query:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MA++ SS SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+V DLY+NFG DGKLVVNYACSMAWG
Subjt:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

Q9LVK3 Ubiquitin-like protein ATG12B2.7e-3271.43Show/hide
Query:  ESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        ES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+V DLY+NFG DGKLVVNYACSMAWG
Subjt:  ESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

Arabidopsis top hitse value%identityAlignment
AT1G54210.1 Ubiquitin-like superfamily protein4.1e-3676.04Show/hide
Query:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MA++ SS SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+V DLY+NFG DGKLVVNYACSMAWG
Subjt:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

AT1G54210.2 Ubiquitin-like superfamily protein3.9e-1044.79Show/hide
Query:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        MA++ SS SS RKVVV LRATG APILKQ+KFK                                            NFG DGKLVVNYACSMAWG
Subjt:  MASKESS-SSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG

AT3G13970.1 Ubiquitin-like superfamily protein1.9e-3371.43Show/hide
Query:  ESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG
        ES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+V DLY+NFG DGKLVVNYACSMAWG
Subjt:  ESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAGGAGTCGTCTAGTTCTGATCGAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCTGGA
ACAGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAATAGTGCATTCTCACCAGGTCCAGATGAGACA
GTTAATGATCTTTACGACAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCAATGGCTTGGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAGGAGTCGTCTAGTTCTGATCGAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCTGGA
ACAGACAAATTTATTAAAGTTATTGATTACATACGCCGGTCAATTCAACGAGACACCTTGTTTGTGTTTGTCAATAGTGCATTCTCACCAGGTCCAGATGAGACA
GTTAATGATCTTTACGACAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCAATGGCTTGGGGCTAA
Protein sequenceShow/hide protein sequence
MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG