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Moc08g10360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g10360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr8:7705715..7706170
RNA-Seq ExpressionMoc08g10360
SyntenyMoc08g10360
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141216.1 uncharacterized protein LOC111011669 [Momordica charantia]4.6e-2352.08Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQR---AISSPPIASS--TALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRC
        M+FLMGLN+SF+Q+ AQLLLMEPE +INR F+LV QE +QR   A +S   ASS   A LA++S++S ++R+SS   Q +R+ER +CTHC LQ HT+DRC
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQR---AISSPPIASS--TALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRC

Query:  YKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANS
        YKL G+PP +RS +    KS +SSS    D   +++ + SVA+S
Subjt:  YKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANS

XP_022148562.1 uncharacterized protein LOC111017196 [Momordica charantia]9.5e-2144.17Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAIS----SPPIASSTALL--------AKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQ
        M FLMGLNDSFSQI A LLLM P P+IN  F L+ QE QQR IS    +   ASSTA          + + SNS  S + S + QGKR+E+  CTHC L 
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAIS----SPPIASSTALL--------AKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQ

Query:  CHTIDRCYKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL
         HT+DRCYKL G+PP YR+ N+   +    S  P+      + ++ ++ +SL+ +N + C  L
Subjt:  CHTIDRCYKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]1.7e-2550.64Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSR-SSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLS
        M+FLMGLN SFSQI AQLLLMEP P+INR FALV QE QQR+IS P + S TA   +++SNS +SR +SSS    KR+++  CTHCG+  HT+D+CYKL 
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSR-SSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLS

Query:  GFPPDYRS----RNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL
         +PP YRS      SS+  S  S+  PS    + +++   ++NSLA+L  + C+ L
Subjt:  GFPPDYRS----RNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL

XP_022158736.1 uncharacterized protein LOC111025199 [Momordica charantia]6.4e-2561.47Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLSG
        M FLMGLNDSFSQI AQLLLMEP PSIN  FAL+ QE QQ AISSP +A++TA LA++SS +    SSSS+ Q K++E+  CTHCG+  H +DRCYKL G
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLSG

Query:  FPPDYRSRN
        +P D   R+
Subjt:  FPPDYRSRN

XP_022158788.1 uncharacterized protein LOC111025254 [Momordica charantia]1.5e-2148.72Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRS----SSSNFQGKRRERLFCTHCGLQCHTIDRCY
        M FLMGLNDSFSQ  AQLLLMEPEPSINR  +LV QE+QQRAI+S    S   LL +++S  G SRS    +SS  Q  ++++  CTHCG+  HT D+CY
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRS----SSSNFQGKRRERLFCTHCGLQCHTIDRCY

Query:  KLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSS-SVSVANSLASLNTNPCKSL
        +L G+PP +R        S SS+S  +++ V   SS S +  +SLAS   + C+ L
Subjt:  KLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSS-SVSVANSLASLNTNPCKSL

TrEMBL top hitse value%identityAlignment
A0A6J1CIG1 uncharacterized protein LOC1110116692.2e-2352.08Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQR---AISSPPIASS--TALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRC
        M+FLMGLN+SF+Q+ AQLLLMEPE +INR F+LV QE +QR   A +S   ASS   A LA++S++S ++R+SS   Q +R+ER +CTHC LQ HT+DRC
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQR---AISSPPIASS--TALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRC

Query:  YKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANS
        YKL G+PP +RS +    KS +SSS    D   +++ + SVA+S
Subjt:  YKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANS

A0A6J1D5E3 uncharacterized protein LOC1110171964.6e-2144.17Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAIS----SPPIASSTALL--------AKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQ
        M FLMGLNDSFSQI A LLLM P P+IN  F L+ QE QQR IS    +   ASSTA          + + SNS  S + S + QGKR+E+  CTHC L 
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAIS----SPPIASSTALL--------AKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQ

Query:  CHTIDRCYKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL
         HT+DRCYKL G+PP YR+ N+   +    S  P+      + ++ ++ +SL+ +N + C  L
Subjt:  CHTIDRCYKLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL

A0A6J1DNP7 uncharacterized protein LOC1110220658.1e-2650.64Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSR-SSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLS
        M+FLMGLN SFSQI AQLLLMEP P+INR FALV QE QQR+IS P + S TA   +++SNS +SR +SSS    KR+++  CTHCG+  HT+D+CYKL 
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSR-SSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLS

Query:  GFPPDYRS----RNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL
         +PP YRS      SS+  S  S+  PS    + +++   ++NSLA+L  + C+ L
Subjt:  GFPPDYRS----RNSSHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL

A0A6J1DX32 uncharacterized protein LOC1110252547.1e-2248.72Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRS----SSSNFQGKRRERLFCTHCGLQCHTIDRCY
        M FLMGLNDSFSQ  AQLLLMEPEPSINR  +LV QE+QQRAI+S    S   LL +++S  G SRS    +SS  Q  ++++  CTHCG+  HT D+CY
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRS----SSSNFQGKRRERLFCTHCGLQCHTIDRCY

Query:  KLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSS-SVSVANSLASLNTNPCKSL
        +L G+PP +R        S SS+S  +++ V   SS S +  +SLAS   + C+ L
Subjt:  KLSGFPPDYRSRNSSHQKSVSSSSMPSTDYVTKNSS-SVSVANSLASLNTNPCKSL

A0A6J1E1U3 uncharacterized protein LOC1110251993.1e-2561.47Show/hide
Query:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLSG
        M FLMGLNDSFSQI AQLLLMEP PSIN  FAL+ QE QQ AISSP +A++TA LA++SS +    SSSS+ Q K++E+  CTHCG+  H +DRCYKL G
Subjt:  MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLSG

Query:  FPPDYRSRN
        +P D   R+
Subjt:  FPPDYRSRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCTTGATGGGTCTGAATGATTCTTTCAGCCAAATCAGCGCTCAATTGCTCCTTATGGAACCAGAGCCCTCGATTAATCGGGTTTTTGCCCTTGTTACTCAAGA
GTCTCAGCAGCGTGCGATTTCTTCGCCGCCAATTGCTTCATCGACTGCTCTGTTGGCGAAGTCTTCTTCGAATTCTGGAGATTCACGATCTTCTTCTTCCAATTTTCAAG
GAAAGAGGCGTGAACGCTTGTTTTGCACACATTGTGGTTTACAATGCCACACGATTGATAGGTGCTACAAGCTTTCTGGCTTTCCCCCTGACTACCGCTCACGGAATTCT
TCTCACCAGAAATCAGTTTCATCTTCTTCTATGCCATCTACTGATTATGTCACAAAGAATTCTTCATCCGTTTCAGTCGCAAACTCTTTGGCTTCACTTAATACTAATCC
ATGTAAGAGCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTCTTGATGGGTCTGAATGATTCTTTCAGCCAAATCAGCGCTCAATTGCTCCTTATGGAACCAGAGCCCTCGATTAATCGGGTTTTTGCCCTTGTTACTCAAGA
GTCTCAGCAGCGTGCGATTTCTTCGCCGCCAATTGCTTCATCGACTGCTCTGTTGGCGAAGTCTTCTTCGAATTCTGGAGATTCACGATCTTCTTCTTCCAATTTTCAAG
GAAAGAGGCGTGAACGCTTGTTTTGCACACATTGTGGTTTACAATGCCACACGATTGATAGGTGCTACAAGCTTTCTGGCTTTCCCCCTGACTACCGCTCACGGAATTCT
TCTCACCAGAAATCAGTTTCATCTTCTTCTATGCCATCTACTGATTATGTCACAAAGAATTCTTCATCCGTTTCAGTCGCAAACTCTTTGGCTTCACTTAATACTAATCC
ATGTAAGAGCCTTTAG
Protein sequenceShow/hide protein sequence
MSFLMGLNDSFSQISAQLLLMEPEPSINRVFALVTQESQQRAISSPPIASSTALLAKSSSNSGDSRSSSSNFQGKRRERLFCTHCGLQCHTIDRCYKLSGFPPDYRSRNS
SHQKSVSSSSMPSTDYVTKNSSSVSVANSLASLNTNPCKSL