; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g10700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g10700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr8:7942092..7944563
RNA-Seq ExpressionMoc08g10700
SyntenyMoc08g10700
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025770.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.1e-3354.48Show/hide
Query:  ETSNSTKKDKIVVDIDPDEANSL-SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCKKYPYQKKRDRTQTKLVF
        +   + K+  I VD+D      + +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VY CHSKR GTGTMK+HL+NCKKYPYQKKRD+TQ  L F
Subjt:  ETSNSTKKDKIVVDIDPDEANSL-SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCKKYPYQKKRDRTQTKLVF

Query:  KPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

KAA0033275.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.1e-3351.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D  +                +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

KAA0060741.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]4.3e-3544.55Show/hide
Query:  ETETSNSTKKDKIVVDIDPD------------EANSLSPPRKRKNCKTSVVWDHFEKLKGDPKDPHAK--YCGTVYACHSKRIGTGTMKNHLDNCKKYPY
        E E   + +  KIV D D D              +  +PP+ RKN K S+VWDHFE+LKGDP D HAK  YCG VYAC SKR GTGTMK+ L+NCKKYPY
Subjt:  ETETSNSTKKDKIVVDIDPD------------EANSLSPPRKRKNCKTSVVWDHFEKLKGDPKDPHAK--YCGTVYACHSKRIGTGTMKNHLDNCKKYPY

Query:  QKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQNCIQSNCVNKGNEMLNKMAKSMQENLIIPEHLEDVMFEEGFR
        QKKRD+T   L FKP+       ++ S L C+ F LE CR AL EMII++E    +V + +    V +  +      +     + I   LE  +  EGF 
Subjt:  QKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQNCIQSNCVNKGNEMLNKMAKSMQENLIIPEHLEDVMFEEGFR

Query:  DVMDGEKDLDELQDFPKISI
         VM+ EK+L +L DF K+SI
Subjt:  DVMDGEKDLDELQDFPKISI

TYK09690.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.4e-3351.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D                   +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.4e-3351.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D                   +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

TrEMBL top hitse value%identityAlignment
A0A5A7SVU3 Zinc finger BED domain-containing protein RICESLEEPER 3-like5.2e-3451.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D  +                +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

A0A5A7URG0 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.5e-3352.17Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D                   +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSK  GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMV
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF LE CR AL EMII++E     V
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMV

A0A5D3BRS6 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.1e-3544.55Show/hide
Query:  ETETSNSTKKDKIVVDIDPD------------EANSLSPPRKRKNCKTSVVWDHFEKLKGDPKDPHAK--YCGTVYACHSKRIGTGTMKNHLDNCKKYPY
        E E   + +  KIV D D D              +  +PP+ RKN K S+VWDHFE+LKGDP D HAK  YCG VYAC SKR GTGTMK+ L+NCKKYPY
Subjt:  ETETSNSTKKDKIVVDIDPD------------EANSLSPPRKRKNCKTSVVWDHFEKLKGDPKDPHAK--YCGTVYACHSKRIGTGTMKNHLDNCKKYPY

Query:  QKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQNCIQSNCVNKGNEMLNKMAKSMQENLIIPEHLEDVMFEEGFR
        QKKRD+T   L FKP+       ++ S L C+ F LE CR AL EMII++E    +V + +    V +  +      +     + I   LE  +  EGF 
Subjt:  QKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQNCIQSNCVNKGNEMLNKMAKSMQENLIIPEHLEDVMFEEGFR

Query:  DVMDGEKDLDELQDFPKISI
         VM+ EK+L +L DF K+SI
Subjt:  DVMDGEKDLDELQDFPKISI

A0A5D3CEC4 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.7e-3451.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D                   +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.7e-3451.85Show/hide
Query:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK
        + E E   S +  KIV D D D                   +PP+ RKN K S+VWDHFE+LKGDP DP A  KYCG VYACHSKR GTGTMK+HL+NCK
Subjt:  EAETETSNSTKKDKIVVDIDPDEANSL--------------SPPRKRKNCKTSVVWDHFEKLKGDPKDPHA--KYCGTVYACHSKRIGTGTMKNHLDNCK

Query:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ
        KYPYQKKRD+TQ  L FKP+       ++ S L C+SF L+ CR AL EMII++E     V+
Subjt:  KYPYQKKRDRTQTKLVFKPQLSSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGGTGGCTGAAGCTGAAACTGAAACATCTAATTCCACCAAAAAGGACAAAATCGTTGTCGACATTGATCCGGATGAAGCCAATTCTCTGAGCCCACCCAGGAA
GCGTAAAAATTGTAAGACTTCTGTAGTTTGGGACCACTTTGAAAAATTAAAAGGCGATCCTAAAGATCCTCATGCAAAATACTGTGGGACTGTATATGCATGTCATTCCA
AACGTATTGGTACTGGAACTATGAAAAATCATTTAGACAATTGTAAGAAATATCCTTACCAAAAGAAGAGGGACCGAACACAAACCAAATTAGTTTTCAAACCTCAACTT
TCTAGTTGTGCTGAGGAGGAATCTGATTCTGTGCTTGCATGTGATTCATTTGATTTGGAGAGTTGTCGAACAGCTTTAGCAGAAATGATTATTCTTAATGAATTTTTGAT
TAGCATGGTTCAGAATTGCATACAAAGTAATTGTGTGAATAAAGGCAATGAAATGCTAAATAAAATGGCTAAGAGCATGCAGGAAAATTTGATAATTCCGGAACACTTGG
AGGATGTAATGTTTGAAGAAGGATTCAGAGATGTCATGGATGGAGAAAAGGACTTGGACGAGCTTCAAGATTTTCCAAAGATATCAATTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGGTGGCTGAAGCTGAAACTGAAACATCTAATTCCACCAAAAAGGACAAAATCGTTGTCGACATTGATCCGGATGAAGCCAATTCTCTGAGCCCACCCAGGAA
GCGTAAAAATTGTAAGACTTCTGTAGTTTGGGACCACTTTGAAAAATTAAAAGGCGATCCTAAAGATCCTCATGCAAAATACTGTGGGACTGTATATGCATGTCATTCCA
AACGTATTGGTACTGGAACTATGAAAAATCATTTAGACAATTGTAAGAAATATCCTTACCAAAAGAAGAGGGACCGAACACAAACCAAATTAGTTTTCAAACCTCAACTT
TCTAGTTGTGCTGAGGAGGAATCTGATTCTGTGCTTGCATGTGATTCATTTGATTTGGAGAGTTGTCGAACAGCTTTAGCAGAAATGATTATTCTTAATGAATTTTTGAT
TAGCATGGTTCAGAATTGCATACAAAGTAATTGTGTGAATAAAGGCAATGAAATGCTAAATAAAATGGCTAAGAGCATGCAGGAAAATTTGATAATTCCGGAACACTTGG
AGGATGTAATGTTTGAAGAAGGATTCAGAGATGTCATGGATGGAGAAAAGGACTTGGACGAGCTTCAAGATTTTCCAAAGATATCAATTCGTTAA
Protein sequenceShow/hide protein sequence
MTKVAEAETETSNSTKKDKIVVDIDPDEANSLSPPRKRKNCKTSVVWDHFEKLKGDPKDPHAKYCGTVYACHSKRIGTGTMKNHLDNCKKYPYQKKRDRTQTKLVFKPQL
SSCAEEESDSVLACDSFDLESCRTALAEMIILNEFLISMVQNCIQSNCVNKGNEMLNKMAKSMQENLIIPEHLEDVMFEEGFRDVMDGEKDLDELQDFPKISIR