; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g12380 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g12380
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHomeobox Hox-B3-like protein
Genome locationchr8:9201377..9202003
RNA-Seq ExpressionMoc08g12380
SyntenyMoc08g12380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036757.1 hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-7677.67Show/hide
Query:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA
        MAD  D     HL FH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRESKLR RNA Y DGE PEK TPPAKKQV+F+GSETVRKRSA
Subjt:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA

Query:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-
         VAQSVPDFSA LRKENR+PP   L PVMEMTPPGKTWGKNN+G   +NSRGSKSASAGEKR   GGGL AARKSYAGFEELKGFSTAAANAINGE +R 
Subjt:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-

Query:  -GGRKGKTVLGIRQI
         GGR+GKTVLG+RQI
Subjt:  -GGRKGKTVLGIRQI

XP_011651352.1 uncharacterized protein LOC101205045 [Cucumis sativus]3.1e-7880.29Show/hide
Query:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
        MA +  HLPFH+ID RSLLLHQNS AD PISL LT   FSMERGPRYRAYAELRESKLR RNA Y   E PEK TPP KKQVKFLGSETVRKRSA VAQS
Subjt:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS

Query:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
        VPDFSA LRKENRKPP   L PVMEMTPPGKTWGK N+G   + SRGSKSASAGEKR   GGGLTA RKSYAGFEELKGFSTAAANAINGE R+GGR+GK
Subjt:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK

Query:  TVLGIRQI
        TVLG+RQI
Subjt:  TVLGIRQI

XP_022148227.1 uncharacterized protein LOC111016939 [Momordica charantia]4.1e-107100Show/hide
Query:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
        MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
Subjt:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS

Query:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
        VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
Subjt:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK

Query:  TVLGIRQI
        TVLGIRQI
Subjt:  TVLGIRQI

XP_022998093.1 uncharacterized protein LOC111492844 [Cucurbita maxima]1.7e-7677.1Show/hide
Query:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA
        MAD  D     HLPFH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRESKLR RN+ Y DGE PEK TPPAKKQV+F+GSETVRKRSA
Subjt:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA

Query:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-
         VAQSVPDFS+ LRKEN++PP   L PVMEMTPPGKTWGKNN+G   +NSRGSKSASAGEKR   GGGL AARKSYAGFEELKGFSTAAANAINGE +R 
Subjt:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-

Query:  GGRKGKTVLGIRQI
        GGR+GKTVLG+RQI
Subjt:  GGRKGKTVLGIRQI

XP_038903179.1 uncharacterized protein LOC120089840 [Benincasa hispida]6.9e-7880.47Show/hide
Query:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA
        MAD+ +     HLPFH+IDPRSLLLHQNS AD PISL+LTA  FSMERGPRYRAYAELRESKLR RNA Y DGE PEK TPPAKKQVKFL SET+RKRSA
Subjt:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA

Query:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-
        AVAQSVPDFSA LRKENRKPP   L PVMEMTPPGKTWGK  +G   +NSRGSKSASAGEKR   GGGLTA RKSYAGFEE+KGFSTAAANAINGE RR 
Subjt:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-

Query:  -GGRKGKTVLGIRQI
         GGR+GKTVLGIRQI
Subjt:  -GGRKGKTVLGIRQI

TrEMBL top hitse value%identityAlignment
A0A0A0L9P8 Uncharacterized protein1.5e-7880.29Show/hide
Query:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
        MA +  HLPFH+ID RSLLLHQNS AD PISL LT   FSMERGPRYRAYAELRESKLR RNA Y   E PEK TPP KKQVKFLGSETVRKRSA VAQS
Subjt:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS

Query:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
        VPDFSA LRKENRKPP   L PVMEMTPPGKTWGK N+G   + SRGSKSASAGEKR   GGGLTA RKSYAGFEELKGFSTAAANAINGE R+GGR+GK
Subjt:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK

Query:  TVLGIRQI
        TVLG+RQI
Subjt:  TVLGIRQI

A0A5A7U2K6 Uncharacterized protein6.9e-7678.47Show/hide
Query:  MADQIDHLPFHAIDPRSLLLHQNSGA-DQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQ
        MAD+  HLPFH+ID RSLLLHQNS A D PISL LT   FSMERGPRY+AYAELRESKLR RNA Y   E PEK TPP KKQ+KFLGSETVRKRSA VAQ
Subjt:  MADQIDHLPFHAIDPRSLLLHQNSGA-DQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQ

Query:  SVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKG
        SVPDFSA LRKENRKPP   L PVMEMTPPGKTWGK N+G   +NSRGSKSASAGEKR   GGGLT  RKSYAGFEELKGFSTA A AINGE R+GGRKG
Subjt:  SVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKG

Query:  KTVLGIRQI
        KTVLG RQ+
Subjt:  KTVLGIRQI

A0A6J1D4H7 uncharacterized protein LOC1110169392.0e-107100Show/hide
Query:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
        MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS
Subjt:  MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQS

Query:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
        VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK
Subjt:  VPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGK

Query:  TVLGIRQI
        TVLGIRQI
Subjt:  TVLGIRQI

A0A6J1GA97 uncharacterized protein LOC1114522048.2e-7777.67Show/hide
Query:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA
        MAD  D     HL FH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRESKLR RNA Y DGE PEK TPPAKKQV+F+GSETVRKRSA
Subjt:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA

Query:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-
         VAQSVPDFSA LRKENR+PP   L PVMEMTPPGKTWGKNN+G   +NSRGSKSASAGEKR   GGGL AARKSYAGFEELKGFSTAAANAINGE +R 
Subjt:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-

Query:  -GGRKGKTVLGIRQI
         GGR+GKTVLG+RQI
Subjt:  -GGRKGKTVLGIRQI

A0A6J1KFU5 uncharacterized protein LOC1114928448.2e-7777.1Show/hide
Query:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA
        MAD  D     HLPFH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRESKLR RN+ Y DGE PEK TPPAKKQV+F+GSETVRKRSA
Subjt:  MADQID-----HLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSA

Query:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-
         VAQSVPDFS+ LRKEN++PP   L PVMEMTPPGKTWGKNN+G   +NSRGSKSASAGEKR   GGGL AARKSYAGFEELKGFSTAAANAINGE +R 
Subjt:  AVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRR-

Query:  GGRKGKTVLGIRQI
        GGR+GKTVLG+RQI
Subjt:  GGRKGKTVLGIRQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67035.1 unknown protein2.8e-1337.62Show/hide
Query:  SLLLHQN--SGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRR----------NARYCDGEAPEKPTPPAKKQVKFLGSETVRK----RSAAVAQS
        SLL   N  S   Q + L +  G +  ERG RY  YA LRESKLR +            R+      E    P KK  +F  +   RK     S+++AQS
Subjt:  SLLLHQN--SGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRR----------NARYCDGEAPEKPTPPAKKQVKFLGSETVRK----RSAAVAQS

Query:  VPDFSAALRKENRKPPAAA--LPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRK
        VPDFS+ +RKENR+PP  +  LP   E+TPP        V  G S  RGS SASAGEK+GG        RKS                        GG  
Subjt:  VPDFSAALRKENRKPPAAA--LPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRK

Query:  GKTVLGIRQI
        G+T+LG RQI
Subjt:  GKTVLGIRQI

AT1G67035.2 unknown protein9.1e-2041.96Show/hide
Query:  SLLLHQN--SGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRR----------NARYCDGEAPEKPTPPAKKQVKFLGSETVRK----RSAAVAQS
        SLL   N  S   Q + L +  G +  ERG RY  YA LRESKLR +            R+      E    P KK  +F  +   RK     S+++AQS
Subjt:  SLLLHQN--SGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRR----------NARYCDGEAPEKPTPPAKKQVKFLGSETVRK----RSAAVAQS

Query:  VPDFSAALRKENRKPPAAA--LPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAIN--GEIRR--
        VPDFS+ +RKENR+PP  +  LP   E+TPP        V  G S  RGS SASAGEK+     G+   RKSYA  ++LK  S AAA+AIN  G  RR  
Subjt:  VPDFSAALRKENRKPPAAA--LPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAIN--GEIRR--

Query:  ---GGRK-------GKTVLGIRQI
           GGRK       G+T+LG RQI
Subjt:  ---GGRK-------GKTVLGIRQI

AT5G38300.1 unknown protein2.6e-2240.08Show/hide
Query:  FHAIDPRSLLLHQNSGADQPISLRLTAGSFS-MERGPRYRAYAELRESKLR-RRNARYCDGEAPEKPTPPAKKQVKFLGS--------------------
        F ++DP SL+L QNS   Q   L+L    FS  ERGPRY  Y+ LRESKLR +R+ +    E  E   P  KKQV+F G+                    
Subjt:  FHAIDPRSLLLHQNSGADQPISLRLTAGSFS-MERGPRYRAYAELRESKLR-RRNARYCDGEAPEKPTPPAKKQVKFLGS--------------------

Query:  --------------ETVRKRS------------AAVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGL-SNSRGSKSASAGEKRGGA
                      E V+K+S            +++AQSVPDFSA +RKENR+P       +  +TPP  T    N G    S SRGSKSASAGEK+   
Subjt:  --------------ETVRKRS------------AAVAQSVPDFSAALRKENRKPPAAALPPVMEMTPPGKTWGKNNVGQGL-SNSRGSKSASAGEKRGGA

Query:  GGGLTAARKSYAGFEELKGFSTAAANAIN--GEIRRGGRK-------GKTVLGIRQI
           +  ARKSYA  E+LK  S AAA+AIN  G    GGRK        +T+LG RQI
Subjt:  GGGLTAARKSYAGFEELKGFSTAAANAIN--GEIRRGGRK-------GKTVLGIRQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCAAATCGACCATCTCCCCTTCCACGCCATCGACCCCAGATCTCTACTCCTCCACCAGAACTCCGGTGCCGATCAACCCATTTCTCTACGGCTCACGGCGGG
GAGTTTTTCGATGGAAAGAGGGCCCAGGTACAGAGCCTACGCAGAGCTCAGAGAATCTAAGCTCAGGCGGAGGAACGCGAGGTACTGCGACGGCGAGGCGCCGGAAAAAC
CCACGCCGCCGGCGAAGAAGCAGGTCAAGTTTCTGGGTTCGGAAACCGTTCGGAAGAGGTCGGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCCGCAGCGTTGAGGAAG
GAGAACAGAAAGCCACCGGCGGCGGCGCTGCCGCCGGTGATGGAGATGACGCCACCGGGGAAGACGTGGGGGAAGAACAACGTGGGGCAGGGTCTGTCTAATTCGAGAGG
GAGTAAGTCAGCCAGTGCCGGGGAGAAGAGGGGCGGCGCCGGCGGTGGGTTAACGGCGGCGAGAAAGAGTTATGCCGGATTTGAAGAGCTGAAGGGGTTTTCTACGGCGG
CGGCGAACGCCATTAATGGCGAAATCAGGAGAGGAGGAAGGAAAGGGAAAACTGTATTGGGAATTAGACAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCAAATCGACCATCTCCCCTTCCACGCCATCGACCCCAGATCTCTACTCCTCCACCAGAACTCCGGTGCCGATCAACCCATTTCTCTACGGCTCACGGCGGG
GAGTTTTTCGATGGAAAGAGGGCCCAGGTACAGAGCCTACGCAGAGCTCAGAGAATCTAAGCTCAGGCGGAGGAACGCGAGGTACTGCGACGGCGAGGCGCCGGAAAAAC
CCACGCCGCCGGCGAAGAAGCAGGTCAAGTTTCTGGGTTCGGAAACCGTTCGGAAGAGGTCGGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCCGCAGCGTTGAGGAAG
GAGAACAGAAAGCCACCGGCGGCGGCGCTGCCGCCGGTGATGGAGATGACGCCACCGGGGAAGACGTGGGGGAAGAACAACGTGGGGCAGGGTCTGTCTAATTCGAGAGG
GAGTAAGTCAGCCAGTGCCGGGGAGAAGAGGGGCGGCGCCGGCGGTGGGTTAACGGCGGCGAGAAAGAGTTATGCCGGATTTGAAGAGCTGAAGGGGTTTTCTACGGCGG
CGGCGAACGCCATTAATGGCGAAATCAGGAGAGGAGGAAGGAAAGGGAAAACTGTATTGGGAATTAGACAGATTTGA
Protein sequenceShow/hide protein sequence
MADQIDHLPFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRESKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQSVPDFSAALRK
ENRKPPAAALPPVMEMTPPGKTWGKNNVGQGLSNSRGSKSASAGEKRGGAGGGLTAARKSYAGFEELKGFSTAAANAINGEIRRGGRKGKTVLGIRQI