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Moc08g12640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g12640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr8:9465288..9468356
RNA-Seq ExpressionMoc08g12640
SyntenyMoc08g12640
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0040008 - regulation of growth (biological process)
InterPro domainsIPR044683 - LAZY family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581771.1 Sm-like protein LSM1B, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1040Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + + +           +D  + E + E  E      GD++ H   SIVK+S+ FLVKK+FVC  G SGF 
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAV
           P    + TPQDA M K + + V
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAV

KAG7018221.1 hypothetical protein SDJN02_20089, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0734.68Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + + +           +D  + E + E  E      GD++ H   SIVK+S+ FLVKK+FVC  G SGF 
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
           P    + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

XP_022955951.1 uncharacterized protein LOC111457786 [Cucurbita moschata]1.2e-0834.68Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + + +           +D  + E + E  E      GD++ H   SIV++S+ FL+KK+FVC  G SGFA
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
           P P  + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

XP_022980726.1 uncharacterized protein LOC111480009 [Cucurbita maxima]9.8e-0835.26Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNN-EDPIDDETVLEFEAENGE-----------------GDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + E+ + D   L  E E+ E                  D K++  SIV++S+ FLVKK+FVC  G SGFA
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNN-EDPIDDETVLEFEAENGE-----------------GDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
             P  + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

XP_023527029.1 uncharacterized protein LOC111790378 [Cucurbita pepo subsp. pepo]1.8e-0935.84Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA
        EE  E+ PSLP+GLL+IGTFGN+  ++N  + + +           +D  + E + E  E      GD++ H   SIVK+S+ FLVKK+FVCG G  GFA
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
           P P  + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

TrEMBL top hitse value%identityAlignment
A0A0A0L9D5 Uncharacterized protein3.4e-0631.75Show/hide
Query:  FTLKKYN-YI-IIPIQSDDFVDEEEGESIPSLPIGLLAIGTFGND----------------NGKSNSNNEDPIDD---ETVLEFEAE-------------
        FTL  Y+ YI I  I +   +++   ES  SLP+GLLAIGTFGN+                + KS  N  D  +D   E V E E E             
Subjt:  FTLKKYN-YI-IIPIQSDDFVDEEEGESIPSLPIGLLAIGTFGND----------------NGKSNSNNEDPIDD---ETVLEFEAE-------------

Query:  -------------------------NGEGD---NKSHRNSIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNKRKTEAV
                                   EGD   N   R SIVK+S+ FL+KK+F+CGSG +    + P P  +  PQDA M K + + +
Subjt:  -------------------------NGEGD---NKSHRNSIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNKRKTEAV

A0A5A7UIH7 Uncharacterized protein3.8e-0530.99Show/hide
Query:  VDEEEGESIPSLPIGLLAIGTFGND----------------NGKSNSNNEDPIDDET---VLEFEAE---------------------------------
        +++   ES  SLP+GLLAIGTFGN+                + KS SN  D  +D +   V E E E                                 
Subjt:  VDEEEGESIPSLPIGLLAIGTFGND----------------NGKSNSNNEDPIDDET---VLEFEAE---------------------------------

Query:  -----NGEGDNKSHRN---SIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNK-RKTEAVG
               +GD + + +   SIVK+S+ FLVKK+F+CGSG +    + P P  +  PQDA M K RK   +G
Subjt:  -----NGEGDNKSHRN---SIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNK-RKTEAVG

A0A6J1GV88 uncharacterized protein LOC1114577865.6e-0934.68Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + + +           +D  + E + E  E      GD++ H   SIV++S+ FL+KK+FVC  G SGFA
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNNEDPI-----------DDETVLEFEAENGE------GDNKSHR-NSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
           P P  + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

A0A6J1IUE0 uncharacterized protein LOC1114800094.8e-0835.26Show/hide
Query:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNN-EDPIDDETVLEFEAENGE-----------------GDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFA
        E+  E+ PSLP+GLLAIGTFGN+  ++N  + E+ + D   L  E E+ E                  D K++  SIV++S+ FLVKK+FVC  G SGFA
Subjt:  EEEGESIPSLPIGLLAIGTFGNDNGKSNSNN-EDPIDDETVLEFEAENGE-----------------GDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFA

Query:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ
             P  + TPQDA M K                 I R  L +K   + S      +R + EK R D+R  +
Subjt:  VTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDISRQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQ

A0A7J6HVW4 Uncharacterized protein1.9e-0429.11Show/hide
Query:  LSSEPTPP-PAQLCSSNLVYNTMSG-FTLKKYNYIIIPIQSDDFVDEEEGESIPSLPIGLLAIGTFGNDN-------GKSNSNNEDPIDDE---------
        LS +P PP P  L     + N ++G  T K  N     + + ++  +E  E     P GLL+IGTFGND+        + N+N+ D I  E         
Subjt:  LSSEPTPP-PAQLCSSNLVYNTMSG-FTLKKYNYIIIPIQSDDFVDEEEGESIPSLPIGLLAIGTFGNDN-------GKSNSNNEDPIDDE---------

Query:  -------TVLEFEAENGEGDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNK------RKTEAVGDEGRQTSAGDISRQK--
               +V+  +        K+ +++I KKSI FL+KK+FVCGSG        P P L  + Q+++M K       K  A  +  R +SA      K  
Subjt:  -------TVLEFEAENGEGDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNK------RKTEAVGDEGRQTSAGDISRQK--

Query:  LPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQTKTDN
         P+K     +  ++D Q     + R D  G+  KTD+
Subjt:  LPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQTKTDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCCATGGTCGAGACCAGGTAACCTCGAATCGGTTTGCGCGGAGGTCGAGAGAAAACCATCGGGGTTCTCGATTGGGGGCCGAGAACTCCTCGGCGTCGAGAA
GGTCAGCATTGAAGCCTGGTTGGCTATGGTCGACCCGAATCGCCGAGTTTCAACTTTCTTATCTAGTGAGCCCACTCCTCCTCCCGCCCAACTCTGCTCATCCAATCTGG
TCTATAACACCATGAGTGGTTTTACGCTTAAGAAATACAATTATATAATTATTCCAATTCAATCAGATGATTTTGTTGATGAAGAAGAAGGTGAAAGCATTCCCTCTTTG
CCGATTGGGCTGCTGGCAATTGGAACTTTTGGCAACGACAATGGCAAAAGTAACAGTAATAATGAGGATCCAATTGATGATGAAACAGTACTAGAATTTGAAGCAGAGAA
TGGTGAGGGTGACAACAAAAGTCATCGCAACTCTATTGTGAAGAAATCTATTCCATTTCTCGTCAAGAAGTTGTTTGTGTGTGGGAGTGGAAGCAGTGGTTTTGCAGTTA
CACTGCCCCTGCCCCGGCTCCTGCCCACGCCCCAAGACGCCAGGATGAACAAGAGAAAAACAGAGGCGGTCGGAGATGAAGGTAGGCAGACGTCAGCCGGAGACATAAGC
AGGCAGAAACTACCAGAGAAGAATGAAGGACGAAAATCTCCTTCCGAACGGGATAAACAAAGACGGATGATGGAGAAAAACAGAGTCGATCGGAGAGGTAGGCAGACAAA
GACGGACAATTGGAAAAGAAGAACGGACGGTTGGAGGAAGAAAAACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCCATGGTCGAGACCAGGTAACCTCGAATCGGTTTGCGCGGAGGTCGAGAGAAAACCATCGGGGTTCTCGATTGGGGGCCGAGAACTCCTCGGCGTCGAGAA
GGTCAGCATTGAAGCCTGGTTGGCTATGGTCGACCCGAATCGCCGAGTTTCAACTTTCTTATCTAGTGAGCCCACTCCTCCTCCCGCCCAACTCTGCTCATCCAATCTGG
TCTATAACACCATGAGTGGTTTTACGCTTAAGAAATACAATTATATAATTATTCCAATTCAATCAGATGATTTTGTTGATGAAGAAGAAGGTGAAAGCATTCCCTCTTTG
CCGATTGGGCTGCTGGCAATTGGAACTTTTGGCAACGACAATGGCAAAAGTAACAGTAATAATGAGGATCCAATTGATGATGAAACAGTACTAGAATTTGAAGCAGAGAA
TGGTGAGGGTGACAACAAAAGTCATCGCAACTCTATTGTGAAGAAATCTATTCCATTTCTCGTCAAGAAGTTGTTTGTGTGTGGGAGTGGAAGCAGTGGTTTTGCAGTTA
CACTGCCCCTGCCCCGGCTCCTGCCCACGCCCCAAGACGCCAGGATGAACAAGAGAAAAACAGAGGCGGTCGGAGATGAAGGTAGGCAGACGTCAGCCGGAGACATAAGC
AGGCAGAAACTACCAGAGAAGAATGAAGGACGAAAATCTCCTTCCGAACGGGATAAACAAAGACGGATGATGGAGAAAAACAGAGTCGATCGGAGAGGTAGGCAGACAAA
GACGGACAATTGGAAAAGAAGAACGGACGGTTGGAGGAAGAAAAACAGATGA
Protein sequenceShow/hide protein sequence
MSNPWSRPGNLESVCAEVERKPSGFSIGGRELLGVEKVSIEAWLAMVDPNRRVSTFLSSEPTPPPAQLCSSNLVYNTMSGFTLKKYNYIIIPIQSDDFVDEEEGESIPSL
PIGLLAIGTFGNDNGKSNSNNEDPIDDETVLEFEAENGEGDNKSHRNSIVKKSIPFLVKKLFVCGSGSSGFAVTLPLPRLLPTPQDARMNKRKTEAVGDEGRQTSAGDIS
RQKLPEKNEGRKSPSERDKQRRMMEKNRVDRRGRQTKTDNWKRRTDGWRKKNR