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Moc08g14110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g14110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description18.1 kDa class I heat shock protein-like
Genome locationchr8:10722763..10726782
RNA-Seq ExpressionMoc08g14110
SyntenyMoc08g14110
Gene Ontology termsGO:0006950 - response to stress (biological process)
InterPro domainsIPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066962.1 class I heat shock protein-like [Cucumis melo var. makuwa]6.7e-1653.21Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA
        MS ILN     E+ DPFLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +   G +LQ      +  T    +  E SG  W        
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA

Query:  GGSGCRRTR
         G  CRR R
Subjt:  GGSGCRRTR

XP_004145723.1 class I heat shock protein [Cucumis sativus]4.4e-1551.52Show/hide
Query:  ELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ----EIEQVSETRTMRAVEISGGAWSGAGGSSAGGSGCRRTR
        E+ DPFLS+INQCPVLNTPTDWKETPAAH+ IADLPGL KDQVKV + +   G +LQ      +  +     +  E SG  W         G  CRR R
Subjt:  ELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ----EIEQVSETRTMRAVEISGGAWSGAGGSSAGGSGCRRTR

XP_008450042.1 PREDICTED: class I heat shock protein-like [Cucumis melo]6.7e-1653.21Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA
        MS ILN     E+ DPFLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +   G +LQ      +  T    +  E SG  W        
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA

Query:  GGSGCRRTR
         G  CRR R
Subjt:  GGSGCRRTR

XP_010111660.1 class I heat shock protein [Morus notabilis]8.8e-1657.83Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTMRAVE
        MS I N+ G GE+LDPFLS+IN+CPVLNTPTDWKETP AHV +ADLPGL K++VKV +   R G    ++ Q+S  R    V+
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTMRAVE

XP_022154167.1 18.1 kDa class I heat shock protein-like [Momordica charantia]2.8e-3098.57Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEI
        MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ I
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEI

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q9 SHSP domain-containing protein2.1e-1551.52Show/hide
Query:  ELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ----EIEQVSETRTMRAVEISGGAWSGAGGSSAGGSGCRRTR
        E+ DPFLS+INQCPVLNTPTDWKETPAAH+ IADLPGL KDQVKV + +   G +LQ      +  +     +  E SG  W         G  CRR R
Subjt:  ELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ----EIEQVSETRTMRAVEISGGAWSGAGGSSAGGSGCRRTR

A0A1S3BNE8 class I heat shock protein-like3.3e-1653.21Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA
        MS ILN     E+ DPFLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +   G +LQ      +  T    +  E SG  W        
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA

Query:  GGSGCRRTR
         G  CRR R
Subjt:  GGSGCRRTR

A0A5A7VF09 Class I heat shock protein-like3.3e-1653.21Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA
        MS ILN     E+ DPFLS+INQCPVLNTPTDWKETPAAHV IADLPGL KDQVKV + +   G +LQ      +  T    +  E SG  W        
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTM---RAVEISGGAWSGAGGSSA

Query:  GGSGCRRTR
         G  CRR R
Subjt:  GGSGCRRTR

A0A6J1DKY6 18.1 kDa class I heat shock protein-like1.4e-3098.57Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEI
        MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ I
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEI

W9S8M5 SHSP domain-containing protein4.3e-1657.83Show/hide
Query:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTMRAVE
        MS I N+ G GE+LDPFLS+IN+CPVLNTPTDWKETP AHV +ADLPGL K++VKV +   R G    ++ Q+S  R    V+
Subjt:  MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTMRAVE

SwissProt top hitse value%identityAlignment
O82012 17.6 kDa class I heat shock protein3.9e-0647.69Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG
        NT  DWKETP AHV  ADLPGL K++VKV + + R   VLQ      +E+  +  T   VE S G
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG

P04793 17.5 kDa class I heat shock protein1.3e-0646.97Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG
        +NT  DWKETP AHV  AD+PGL K++VKV + D R   VLQ      +E+  +  T   VE S G
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG

P04794 17.5 kDa class I heat shock protein3.9e-0643.48Show/hide
Query:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGGAWS
        ++T  DWKETP AHV  AD+PGL K++VKV + D R   VLQ      +E+  +  T   VE S G ++
Subjt:  LNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGGAWS

P30693 17.6 kDa class I heat shock protein1.2e-0744.44Show/hide
Query:  DPFLSIINQCP------VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGG
        DPF  II+  P      ++N   DWKETP AHVL ADLPG+ K++VKV + D R   +  E   EQ  +  T   VE S G
Subjt:  DPFLSIINQCP------VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGG

Q943Q3 16.6 kDa heat shock protein7.0e-0850.77Show/hide
Query:  DPF---LSIINQCPVL-NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSE
        DPF    S+  +CPVL N   DWKETP AHV  ADLPG+ KDQ KV + D  GG ++   E+  E
Subjt:  DPF---LSIINQCPVL-NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSE

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein4.0e-0640.3Show/hide
Query:  VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS
        + N   DWKET  AHV  ADLPG+ K++VKV + D     +  E  +E+  +  T   VE S G +S
Subjt:  VLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS

AT1G53540.1 HSP20-like chaperones superfamily protein2.3e-0639.71Show/hide
Query:  ELLDPFLSIINQCPVLNTP-----------TDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ
        ++ DPF   +    + N P            DW+ETP AHV  ADLPGL K++VKV + D   G +LQ
Subjt:  ELLDPFLSIINQCPVLNTP-----------TDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ

AT1G59860.1 HSP20-like chaperones superfamily protein1.4e-0635.29Show/hide
Query:  ELLDPFLSI----INQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS
        ++ DPF  +     +   + N   DWKET  AHV  ADLPG+ K++VKV + D     +  E  +E+  +  T   VE S G +S
Subjt:  ELLDPFLSI----INQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS

AT2G29500.1 HSP20-like chaperones superfamily protein1.0e-0633.33Show/hide
Query:  ELLDPFLSIIN------QCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS
        ++ DPF  + +         ++N   DW+ETP AHV  ADLPGL K++VKV + +     +  E  +E+  +  T   VE S G ++
Subjt:  ELLDPFLSIIN------QCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQE--IEQVSETRTMRAVEISGGAWS

AT3G46230.1 heat shock protein 17.45.2e-0643.08Show/hide
Query:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG
        N   DW+ETP AHV  AD+PGL K++VKV + D   G +LQ       E   ++ T   VE S G
Subjt:  NTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQ-----EIEQVSETRTMRAVEISGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCCCTTCCTCTCTATCATAAACCAGTGTCCTGTTCTGAACACGCCCACCGACTGGAAAGAGACTCC
GGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACCGTGGCGGACCCGTGCTCCAGGAGATAGAGCAAGTAT
CGGAGACGAGAACGATGAGAGCAGTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAACGCGAAGGGCAGCGAGG
TATCTTCAGTTTGGGGAAGTAATCAACGCTTCGTCAATTCCTCCTCGAAATACGAGATTCTACAGAGATTGCATTAGCATTCACTGCCTACGCAATGACACGAACGAAAG
TTGGGTCTTTTCCTGTGATGATAGCGCAGCAGCGCTGTCTTGTAGCGTCATGGCCCTACGAGCTTTGCACGTTCGTCAATTTAAGGACAGTGTCATGGCATTCACTAATG
GTGTCATGGCGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCCCTTCCTCTCTATCATAAACCAGTGTCCTGTTCTGAACACGCCCACCGACTGGAAAGAGACTCC
GGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACCGTGGCGGACCCGTGCTCCAGGAGATAGAGCAAGTAT
CGGAGACGAGAACGATGAGAGCAGTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAACGCGAAGGGCAGCGAGG
TATCTTCAGTTTGGGGAAGTAATCAACGCTTCGTCAATTCCTCCTCGAAATACGAGATTCTACAGAGATTGCATTAGCATTCACTGCCTACGCAATGACACGAACGAAAG
TTGGGTCTTTTCCTGTGATGATAGCGCAGCAGCGCTGTCTTGTAGCGTCATGGCCCTACGAGCTTTGCACGTTCGTCAATTTAAGGACAGTGTCATGGCATTCACTAATG
GTGTCATGGCGTTGTAG
Protein sequenceShow/hide protein sequence
MSSILNIAGAGELLDPFLSIINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHRGGPVLQEIEQVSETRTMRAVEISGGAWSGAGGSSAGGSGCRRTRRAAR
YLQFGEVINASSIPPRNTRFYRDCISIHCLRNDTNESWVFSCDDSAAALSCSVMALRALHVRQFKDSVMAFTNGVMAL