; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g14200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g14200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionF-box protein CPR30-like
Genome locationchr8:10795945..10796514
RNA-Seq ExpressionMoc08g14200
SyntenyMoc08g14200
Gene Ontology termsNA
InterPro domainsIPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150319.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]1.6e-6279.38Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        ML+SLKFPLASAAVVDMDLPLSE F+Y  FSG+S GLICLS+ L NIF+CNPATGELR LPPSILLT+PPEDPFD + T  N VGFGYD KSMDFKVVRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVS-GCSFDMYHEGMYYWIALEEDE
        V F EE   Y C RTEVYDLG DGWREIESRACGFVVS   SFDMYHEGMYYWIA EE E
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVS-GCSFDMYHEGMYYWIALEEDE

XP_022152190.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]2.7e-5784.78Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSG-HSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVR
        MLTSLKFPLASAAVVDM LPLS+HFQYCEF+G +SR LICLSNMLGNI+LCNPATGELRKLPPSILLTEPPEDPFD + T T+ +GFGYDPKSMDFKVVR
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSG-HSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVR

Query:  VVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVV
        VVTFEE+   Y C RTEVYDLGKDGWREIESRA GFVV
Subjt:  VVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVV

XP_022154170.1 F-box protein CPR30-like [Momordica charantia]2.0e-108100Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF
        VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF

XP_022159389.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]3.2e-5065.84Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        ML+ LKFPL S AVVDMD PL E F++C  SG+S GLICLS    +IFLCNPATGELR+LPPSILLT+P +DPFD + T  + VGFGYD KS DFK VRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEE
        V    EEY Y  Y+TEVYDL KDGWREIESRACG V    SF+MYHEG +YW A+E+   E
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEE

XP_022159408.1 F-box/kelch-repeat protein At3g23880-like [Momordica charantia]6.3e-4657.59Show/hide
Query:  MLTSLKFPL---ASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSI-LLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFK
        M T LKFPL    SA+V+D DLP  E+FQY EF GHS GL+CLS++  +I LCNPAT E RKLPPSI LLTEPPE+P D   + TN VGFGYDP+S DFK
Subjt:  MLTSLKFPL---ASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSI-LLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFK

Query:  VVRVVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSF
        VVRVV F E    +   R EVYDLGKD WREI++  CG V    SFDMYHEGMYYW A   D E   E I  +   +E   F     P SF
Subjt:  VVRVVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSF

TrEMBL top hitse value%identityAlignment
A0A6J1D9N5 F-box/kelch-repeat protein At3g06240-like8.0e-6379.38Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        ML+SLKFPLASAAVVDMDLPLSE F+Y  FSG+S GLICLS+ L NIF+CNPATGELR LPPSILLT+PPEDPFD + T  N VGFGYD KSMDFKVVRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVS-GCSFDMYHEGMYYWIALEEDE
        V F EE   Y C RTEVYDLG DGWREIESRACGFVVS   SFDMYHEGMYYWIA EE E
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVS-GCSFDMYHEGMYYWIALEEDE

A0A6J1DD85 F-box/kelch-repeat protein At3g06240-like1.3e-5784.78Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSG-HSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVR
        MLTSLKFPLASAAVVDM LPLS+HFQYCEF+G +SR LICLSNMLGNI+LCNPATGELRKLPPSILLTEPPEDPFD + T T+ +GFGYDPKSMDFKVVR
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSG-HSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVR

Query:  VVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVV
        VVTFEE+   Y C RTEVYDLGKDGWREIESRA GFVV
Subjt:  VVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVV

A0A6J1DIV7 F-box protein CPR30-like9.6e-109100Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF
        VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF

A0A6J1DYQ4 F-box/kelch-repeat protein At3g23880-like3.0e-4657.59Show/hide
Query:  MLTSLKFPL---ASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSI-LLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFK
        M T LKFPL    SA+V+D DLP  E+FQY EF GHS GL+CLS++  +I LCNPAT E RKLPPSI LLTEPPE+P D   + TN VGFGYDP+S DFK
Subjt:  MLTSLKFPL---ASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSI-LLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFK

Query:  VVRVVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSF
        VVRVV F E    +   R EVYDLGKD WREI++  CG V    SFDMYHEGMYYW A   D E   E I  +   +E   F     P SF
Subjt:  VVRVVTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSF

A0A6J1E295 F-box/kelch-repeat protein At3g06240-like1.6e-5065.84Show/hide
Query:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV
        ML+ LKFPL S AVVDMD PL E F++C  SG+S GLICLS    +IFLCNPATGELR+LPPSILLT+P +DPFD + T  + VGFGYD KS DFK VRV
Subjt:  MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRV

Query:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEE
        V    EEY Y  Y+TEVYDL KDGWREIESRACG V    SF+MYHEG +YW A+E+   E
Subjt:  VTFEEEEYEYECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEE

SwissProt top hitse value%identityAlignment
Q8GXC7 F-box/kelch-repeat protein At3g062407.1e-0830.6Show/hide
Query:  YCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYECYRTEVYDLGKDGWR
        + E  G S GL+C+S   G +FL NP TG+ ++LP +     P    ++    +T   GFG+D  + D+K+V++V   E+  +       VY L  D WR
Subjt:  YCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYECYRTEVYDLGKDGWR

Query:  EI----ESRACGFVVSGCSFDMYHEGMYYWIALE
         I         G   SG  F+    G  +W+  E
Subjt:  EI----ESRACGFVVSGCSFDMYHEGMYYWIALE

Q9SU30 F-box protein CPR19.8e-1041.28Show/hide
Query:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD
        E  G S GLI LSN   ++ + NP+T ++ +LPPS +      D  D S TR     G GYD  S D+KVVR+V F+ + E E  C   Y  +V+ L K+
Subjt:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD

Query:  GWREIESRA
         W+ IES A
Subjt:  GWREIESRA

Arabidopsis top hitse value%identityAlignment
AT1G54640.1 F-box family protein-related8.3e-0432.22Show/hide
Query:  HSRGLICLSNMLGN-IFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYE--CYRTEVYD
        H RG++CL+    N + +  P + E +++P  I           P  T TN +GFGYD  S D+K+V  + F+   Y ++  C+R  V D
Subjt:  HSRGLICLSNMLGN-IFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYE--CYRTEVYD

AT3G06240.1 F-box family protein5.0e-0930.6Show/hide
Query:  YCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYECYRTEVYDLGKDGWR
        + E  G S GL+C+S   G +FL NP TG+ ++LP +     P    ++    +T   GFG+D  + D+K+V++V   E+  +       VY L  D WR
Subjt:  YCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEYECYRTEVYDLGKDGWR

Query:  EI----ESRACGFVVSGCSFDMYHEGMYYWIALE
         I         G   SG  F+    G  +W+  E
Subjt:  EI----ESRACGFVVSGCSFDMYHEGMYYWIALE

AT4G12560.1 F-box and associated interaction domains-containing protein7.0e-1141.28Show/hide
Query:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD
        E  G S GLI LSN   ++ + NP+T ++ +LPPS +      D  D S TR     G GYD  S D+KVVR+V F+ + E E  C   Y  +V+ L K+
Subjt:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD

Query:  GWREIESRA
         W+ IES A
Subjt:  GWREIESRA

AT4G12560.2 F-box and associated interaction domains-containing protein7.0e-1141.28Show/hide
Query:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD
        E  G S GLI LSN   ++ + NP+T ++ +LPPS +      D  D S TR     G GYD  S D+KVVR+V F+ + E E  C   Y  +V+ L K+
Subjt:  EFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTN-GVGFGYDPKSMDFKVVRVVTFE-EEEYEYEC---YRTEVYDLGKD

Query:  GWREIESRA
         W+ IES A
Subjt:  GWREIESRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCACCTCCCTCAAATTTCCCCTCGCATCTGCGGCTGTTGTGGACATGGATCTTCCATTGTCCGAGCATTTTCAGTATTGCGAATTCAGCGGCCATTCTCGCGGTTT
AATTTGCCTCTCCAATATGCTCGGCAATATTTTCCTCTGTAATCCAGCAACCGGAGAGCTTCGCAAGCTGCCCCCCTCCATTCTCCTCACCGAACCCCCCGAGGACCCCT
TCGATCCAAGCTGTACACGCACGAACGGAGTTGGATTCGGGTACGATCCGAAATCAATGGATTTTAAGGTCGTTAGGGTTGTGACATTTGAAGAAGAAGAATATGAATAT
GAATGTTACAGAACGGAAGTGTACGATTTGGGGAAAGATGGTTGGAGAGAAATCGAAAGTCGTGCTTGTGGGTTTGTAGTCTCGGGTTGTTCGTTTGATATGTATCACGA
AGGAATGTATTACTGGATCGCGTTAGAGGAGGACGAGGAAGAGCACCAGGAATGTATTACTCCTTACTTACGATTAGATGAAAGTATAGCTTTCTTGGTTTTCACAAAAC
CAAACTCCTTCCATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCACCTCCCTCAAATTTCCCCTCGCATCTGCGGCTGTTGTGGACATGGATCTTCCATTGTCCGAGCATTTTCAGTATTGCGAATTCAGCGGCCATTCTCGCGGTTT
AATTTGCCTCTCCAATATGCTCGGCAATATTTTCCTCTGTAATCCAGCAACCGGAGAGCTTCGCAAGCTGCCCCCCTCCATTCTCCTCACCGAACCCCCCGAGGACCCCT
TCGATCCAAGCTGTACACGCACGAACGGAGTTGGATTCGGGTACGATCCGAAATCAATGGATTTTAAGGTCGTTAGGGTTGTGACATTTGAAGAAGAAGAATATGAATAT
GAATGTTACAGAACGGAAGTGTACGATTTGGGGAAAGATGGTTGGAGAGAAATCGAAAGTCGTGCTTGTGGGTTTGTAGTCTCGGGTTGTTCGTTTGATATGTATCACGA
AGGAATGTATTACTGGATCGCGTTAGAGGAGGACGAGGAAGAGCACCAGGAATGTATTACTCCTTACTTACGATTAGATGAAAGTATAGCTTTCTTGGTTTTCACAAAAC
CAAACTCCTTCCATTTCTAA
Protein sequenceShow/hide protein sequence
MLTSLKFPLASAAVVDMDLPLSEHFQYCEFSGHSRGLICLSNMLGNIFLCNPATGELRKLPPSILLTEPPEDPFDPSCTRTNGVGFGYDPKSMDFKVVRVVTFEEEEYEY
ECYRTEVYDLGKDGWREIESRACGFVVSGCSFDMYHEGMYYWIALEEDEEEHQECITPYLRLDESIAFLVFTKPNSFHF