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Moc08g14230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g14230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:10801526..10802770
RNA-Seq ExpressionMoc08g14230
SyntenyMoc08g14230
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]1.7e-2572.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLARR ARFVVRG ALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]1.3e-2572.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLARR ARFVVR GALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]5.0e-2571.43Show/hide
Query:  RAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHP
        R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFEVKGI+RPGTY+L DL+G +L+HP
Subjt:  RAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]1.5e-0538.75Show/hide
Query:  MDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNARVRP
        MDPI DF+ G    + KE +++AR+ AR+++R G LY+  FSLPLL+C+  E G     ++    ++G    H  AR  P
Subjt:  MDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNARVRP

XP_022158219.1 protein NYNRIN-like [Momordica charantia]5.0e-2572.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLA RVARFVVR GALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.0e-3170.33Show/hide
Query:  KGLRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHPWNAGHLKRYYP
        +G R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FEVKGI+RPGTY+L DL+  VLAHPWNA HLKRYYP
Subjt:  KGLRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHPWNAGHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H8.2e-2672.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLARR ARFVVRG ALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

A0A6J1CQD7 Ribonuclease H6.3e-2672.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLARR ARFVVR GALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

A0A6J1DP99 uncharacterized protein K02A2.6-like2.4e-2571.43Show/hide
Query:  RAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHP
        R  AQLRLAEYQ +MARHYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPFEVKGI+RPGTY+L DL+G +L+HP
Subjt:  RAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHP

A0A6J1DP99 uncharacterized protein K02A2.6-like7.3e-0638.75Show/hide
Query:  MDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNARVRP
        MDPI DF+ G    + KE +++AR+ AR+++R G LY+  FSLPLL+C+  E G     ++    ++G    H  AR  P
Subjt:  MDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNARVRP

A0A6J1DXL9 uncharacterized protein LOC1110254482.9e-3170.33Show/hide
Query:  KGLRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHPWNAGHLKRYYP
        +G R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LDP+WE  FEVKGI+RPGTY+L DL+  VLAHPWNA HLKRYYP
Subjt:  KGLRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHPWNAGHLKRYYP

A0A6J1DYS0 Ribonuclease H2.4e-2572.41Show/hide
Query:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR
        MEIGAPESSWMDPIADFIRGNSPQ+PKERRKLA RVARFVVR GALY+R FSLPLLRCLTPE+GL  + ++    ++G    H  AR
Subjt:  MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAAACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGA
GTAGCTCGGTTCGTGGTCCGAGGTGGAGCATTGTACCAGCGCGACTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAAAGGGCCTAAGAGCAATGGCCCAG
CTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTAGTCTTAAGGAGGGTCCAAACA
CACGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAATCCGACCTGGGACGTACGTATTGGGCGATCTGCAAGGAGACGTCCTCGCG
CACCCGTGGAACGCGGGGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAAACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGA
GTAGCTCGGTTCGTGGTCCGAGGTGGAGCATTGTACCAGCGCGACTTTTCCCTGCCTCTATTGAGATGCCTAACCCCTGAAAAGGGCCTAAGAGCAATGGCCCAG
CTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTAGTCTTAAGGAGGGTCCAAACA
CACGTGGGTGCCCTTGATCCGGCCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAATCCGACCTGGGACGTACGTATTGGGCGATCTGCAAGGAGACGTCCTCGCG
CACCCGTGGAACGCGGGGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MEIGAPESSWMDPIADFIRGNSPQNPKERRKLARRVARFVVRGGALYQRDFSLPLLRCLTPEKGLRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQT
HVGALDPAWEGPFEVKGIIRPGTYVLGDLQGDVLAHPWNAGHLKRYYP