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Moc08g14780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g14780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:11409988..11410206
RNA-Seq ExpressionMoc08g14780
SyntenyMoc08g14780
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.9e-0739.19Show/hide
Query:  TNQAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKY-----GTSPRTLNQET
        +++ + L++  K+     +GGLG++R    NKALL KW+WRY  E KALWR++I  KY     G  P  ++  T
Subjt:  TNQAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKY-----GTSPRTLNQET

KAG2720367.1 hypothetical protein I3760_02G032600 [Carya illinoinensis]8.3e-0749.06Show/hide
Query:  LLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG
        L++ +K+ + +  GGLG+   K  NKALL KW+WRY  E+ ALW++++DAKYG
Subjt:  LLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG

KAG6723354.1 hypothetical protein I3842_03G204200 [Carya illinoinensis]1.7e-0749.09Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG
        + L++ +K+ + +  GGLG+   K  NKALL KW+WRY  E KALW++++DAKYG
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG

XP_019241886.1 PREDICTED: uncharacterized protein LOC109221911 [Nicotiana attenuata]1.1e-0647.37Show/hide
Query:  QAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG
        +A+ L+  + + S   +GGLG+   +  N+ LL KW+WRY  E++ALWRKVI+AKYG
Subjt:  QAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYG

XP_042965576.1 uncharacterized protein LOC122299388 [Carya illinoinensis]1.1e-0650Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT
        Y L+   K+ + ++DGGLG+   +A N ALL KW+WRY  E +ALW+ VID KYG+
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT

TrEMBL top hitse value%identityAlignment
A0A2N9EMD6 zf-RVT domain-containing protein2.1e-0850Show/hide
Query:  TNQAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT
        ++Q  +L DG K+   I++GGL +   ++ NKALL KW+WRY  E  ALWR V+DAKYG+
Subjt:  TNQAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT

A0A2N9F6R4 Reverse transcriptase domain-containing protein3.6e-0850Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT
        + L++ ++L S I++GGLG+ R    N+ALL KW+WRY  E ++LWR+VID+KYG+
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT

A0A2N9FHM1 Reverse transcriptase domain-containing protein4.8e-0850Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT
        + L++ +++ S I++GGLG+ +    NKALL KW+WRY  E  ALWR+VID+KYG+
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT

A0A2N9FL13 Uncharacterized protein3.6e-0848.21Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT
        Y L++ +K+ + ++ GGLG+      NKALL KW+WRY  E +ALWR+V+D+KYG+
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGT

A0A2N9GT09 Uncharacterized protein8.1e-0845.76Show/hide
Query:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGTSPR
        + L++ +++ SL+  GGLG+      NKALL KW+WRY  E  +LWR+V+D KYG+  R
Subjt:  YSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGTSPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATCAGGCTTACTCCTTGTTAGATGGGAGAAAACTCTTCTCCCTCATCAAAGATGGTGGATTGGGGCTCACAAGGCCTAAGGCTAAGAACAAAGCTCTC
CTTGCAAAATGGATTTGGAGATATTGCGGGGAAGAAAAGGCTCTTTGGAGAAAGGTTATTGATGCTAAATATGGAACCAGCCCTCGAACGTTAAACCAGGAAACC
ATTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAATCAGGCTTACTCCTTGTTAGATGGGAGAAAACTCTTCTCCCTCATCAAAGATGGTGGATTGGGGCTCACAAGGCCTAAGGCTAAGAACAAAGCTCTC
CTTGCAAAATGGATTTGGAGATATTGCGGGGAAGAAAAGGCTCTTTGGAGAAAGGTTATTGATGCTAAATATGGAACCAGCCCTCGAACGTTAAACCAGGAAACC
ATTCCTTAG
Protein sequenceShow/hide protein sequence
MTNQAYSLLDGRKLFSLIKDGGLGLTRPKAKNKALLAKWIWRYCGEEKALWRKVIDAKYGTSPRTLNQETIP