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Moc08g14830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g14830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr8:11462457..11463071
RNA-Seq ExpressionMoc08g14830
SyntenyMoc08g14830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]9.2e-4455.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CP      TS S++ST P   NP++ DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]1.2e-4355.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CPP    + + SS+ST P   NP + DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]9.2e-4455.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CP      TS S++ST P   NP++ DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

XP_022158689.1 uncharacterized protein LOC111025150 [Momordica charantia]1.7e-4554.5Show/hide
Query:  SDSSGVATELSSPIFLLSNICNLISILV-----------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATL
        +DSS    +LSSPIFLLSNICNL+S+ +                               P     +    SS+ P A NP  S+WIAKDHALMT++NA L
Subjt:  SDSSGVATELSSPIFLLSNICNLISILV-----------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATL

Query:  SPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        S +ALAY+VGC++S+QVW TLVKHYSS S TNVVNLKS+LQSI KKP   I  Y+QR+KELKDKLANV V++D EDL+IYTLN L  ++N FRTSMRTR+
Subjt:  SPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]3.2e-4470.42Show/hide
Query:  PPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLSPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRV
        P   L S+S+S SST+PI VNP  SDWIAKDHALMT++NATLSP+ALAY+VGC++S+QVW TLVK+YSS S TNVVNLKS LQSI KKP E I  Y+QR+
Subjt:  PPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLSPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRV

Query:  KELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        KELKDKLANVSV++D EDL+IYTLNGL  ++N F TSM TR+
Subjt:  KELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X25.8e-4455.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CPP    + + SS+ST P   NP + DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X15.8e-4455.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CPP    + + SS+ST P   NP + DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

A0A5D3CLI6 T4.55.8e-4455.28Show/hide
Query:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS
        SS    +  SPIFLLSNICNLIS+ +                              CPP    + + SS+ST P   NP + DWIAKD ALMTVINATLS
Subjt:  SSGVATELSSPIFLLSNICNLISILV------------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLS

Query:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        P ALAY+VG  +SKQVWD L K YSS S +NVVNLKS+LQ+I KKP E I  YI+R+KE+KDKLANVS  I+ EDL+IY LNGL  +YN FRTSMRTR+
Subjt:  PTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

A0A6J1DYF1 uncharacterized protein LOC1110257091.5e-4470.42Show/hide
Query:  PPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLSPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRV
        P   L S+S+S SST+PI VNP  SDWIAKDHALMT++NATLSP+ALAY+VGC++S+QVW TLVK+YSS S TNVVNLKS LQSI KKP E I  Y+QR+
Subjt:  PPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLSPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRV

Query:  KELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        KELKDKLANVSV++D EDL+IYTLNGL  ++N F TSM TR+
Subjt:  KELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

A0A6J1E049 uncharacterized protein LOC1110251508.2e-4654.5Show/hide
Query:  SDSSGVATELSSPIFLLSNICNLISILV-----------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATL
        +DSS    +LSSPIFLLSNICNL+S+ +                               P     +    SS+ P A NP  S+WIAKDHALMT++NA L
Subjt:  SDSSGVATELSSPIFLLSNICNLISILV-----------------------------CPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATL

Query:  SPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA
        S +ALAY+VGC++S+QVW TLVKHYSS S TNVVNLKS+LQSI KKP   I  Y+QR+KELKDKLANV V++D EDL+IYTLN L  ++N FRTSMRTR+
Subjt:  SPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNLKSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCATCTGATTCTTCTGGTGTTGCGACCGAATTGTCTTCTCCAATTTTTCTGTTGTCAAATATCTGCAACCTGATTTCAATCCTGGTTTGTCCTCCTCTTCATCT
ATCATCTACTTCGGAGTCCTCTTCCTCTACGACTCCTATTGCGGTCAATCCAGTGCACAGTGATTGGATCGCCAAAGATCATGCCCTAATGACAGTAATCAATGCAACAC
TTTCTCCGACTGCTCTCGCTTACATCGTTGGATGCGAAACCTCTAAACAGGTATGGGATACCCTAGTGAAGCACTATTCCTCCAAATCATGCACTAATGTGGTGAATCTG
AAGTCTGAATTACAGTCTATTATCAAGAAACCATCTGAATTGATCAGTCAGTATATACAGAGGGTCAAGGAACTTAAGGACAAGTTAGCGAATGTTTCAGTCGTCATCGA
TTATGAAGATTTGATCATATACACCTTGAATGGTCTTTCTACTGATTATAATATCTTTAGAACCTCCATGCGCACACGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCATCTGATTCTTCTGGTGTTGCGACCGAATTGTCTTCTCCAATTTTTCTGTTGTCAAATATCTGCAACCTGATTTCAATCCTGGTTTGTCCTCCTCTTCATCT
ATCATCTACTTCGGAGTCCTCTTCCTCTACGACTCCTATTGCGGTCAATCCAGTGCACAGTGATTGGATCGCCAAAGATCATGCCCTAATGACAGTAATCAATGCAACAC
TTTCTCCGACTGCTCTCGCTTACATCGTTGGATGCGAAACCTCTAAACAGGTATGGGATACCCTAGTGAAGCACTATTCCTCCAAATCATGCACTAATGTGGTGAATCTG
AAGTCTGAATTACAGTCTATTATCAAGAAACCATCTGAATTGATCAGTCAGTATATACAGAGGGTCAAGGAACTTAAGGACAAGTTAGCGAATGTTTCAGTCGTCATCGA
TTATGAAGATTTGATCATATACACCTTGAATGGTCTTTCTACTGATTATAATATCTTTAGAACCTCCATGCGCACACGTGCTTAA
Protein sequenceShow/hide protein sequence
MVASDSSGVATELSSPIFLLSNICNLISILVCPPLHLSSTSESSSSTTPIAVNPVHSDWIAKDHALMTVINATLSPTALAYIVGCETSKQVWDTLVKHYSSKSCTNVVNL
KSELQSIIKKPSELISQYIQRVKELKDKLANVSVVIDYEDLIIYTLNGLSTDYNIFRTSMRTRA