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Moc08g15550 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g15550
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:11958072..11961783
RNA-Seq ExpressionMoc08g15550
SyntenyMoc08g15550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]1.1e-1650.49Show/hide
Query:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  ++E L+   +     ++  +  +  FT D+L+ PIP KF AP +  YDG  DP  YVEVFE  M+F AASDAIKCRAF+IAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]6.4e-1751.46Show/hide
Query:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  + E L+   +     ++  +  +  FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F A SDAIKCRAFQIAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

XP_022150613.1 uncharacterized protein LOC111018708, partial [Momordica charantia]6.4e-1772.31Show/hide
Query:  FTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSARLWY
        FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSARLWY
Subjt:  FTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSARLWY

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]9.8e-1855.77Show/hide
Query:  RSKMDQLREMMQKEIEYLEN--NYKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSA
        R + DQLR  +  ++E L+     K     D    E P FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSA
Subjt:  RSKMDQLREMMQKEIEYLEN--NYKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSA

Query:  RLWY
        RLWY
Subjt:  RLWY

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]1.5e-1853.4Show/hide
Query:  RSKMDQLREMMQKEIEYLENN-YKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  ++E L+    +    ++  +  +P FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENN-YKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088135.3e-1750.49Show/hide
Query:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  ++E L+   +     ++  +  +  FT D+L+ PIP KF AP +  YDG  DP  YVEVFE  M+F AASDAIKCRAF+IAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

A0A6J1CKB3 uncharacterized protein LOC1110120813.1e-1751.46Show/hide
Query:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  + E L+   +     ++  +  +  FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F A SDAIKCRAFQIAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENNYKAPR-QVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

A0A6J1D9W7 uncharacterized protein LOC1110187083.1e-1772.31Show/hide
Query:  FTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSARLWY
        FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSARLWY
Subjt:  FTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSARLWY

A0A6J1DS95 uncharacterized protein LOC1110234214.8e-1855.77Show/hide
Query:  RSKMDQLREMMQKEIEYLEN--NYKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSA
        R + DQLR  +  ++E L+     K     D    E P FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSA
Subjt:  RSKMDQLREMMQKEIEYLEN--NYKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSA

Query:  RLWY
        RLWY
Subjt:  RLWY

A0A6J1DXR9 uncharacterized protein LOC1110251097.3e-1953.4Show/hide
Query:  RSKMDQLREMMQKEIEYLENN-YKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR
        R + DQLR  +  ++E L+    +    ++  +  +P FT D+L+ PIP KF AP +  YDG  DP  YVEVFEG M+F AASDAIKCRAFQIAL GSAR
Subjt:  RSKMDQLREMMQKEIEYLENN-YKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAASDAIKCRAFQIALEGSAR

Query:  LWY
        LWY
Subjt:  LWY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTCCACACAGAAGCTAAGTATATATGTCTCGACTCATTCCCTTGGCCGAGTCGATTATCCTTAGTGGCCAAGCCGAACAAGTCTGCTAAAGATCGCGCTCC
CATACTACTGGCTGAGCCGGTTGACTTATCTAAGCTCGGTCACACCTCTAACATACTCCACAACAACACGCCACGTTTCACGGTCTGCTACCTAACGTTTGAAGCTCACT
ACCCAGCTCATCTAGTCCGAGCCGACGTTCGCGAACTGTCCCACACTCCTAACCCTGCTGAGGGGTGGGAGGGAGAGCGCCGAATCTATGCCCGATGGACTTACTCCCAA
GTGGCGGGTACCTCTAACGATCGCGTTCTGGATGGTGAGCAACGCAACAATGCGGAGCATCCCCCAGCTGGTGACAAGCCGAATGGCCCGCCCGTTCCTGATAACCGGGG
AGAGTTCCCCCCTCTTCCCCCATGCCCATCGACTGTCCCGGGGTGGGGGCATGTCTGCGCTCGCTCGGGTCAGAGCGTCGACCCAAGCATAGTAGCCAACGCTTTGGCCG
AGCCGAACAAGTCTGCTAAAGATCGCGCTCCCATACTACTGGTTGAGCCGGTTGACTTACATCAGCTCGGTCACATCTCCGACATACTCCACGACAACACTCCACGTTTC
ACGTTCTGCTACCTGACGTTTGAAGCTCACTACCCAGCTCATCTAGTTCAAGCCGACATTCGCGAAGCTAGTAGATTTCTTGATTCAACATTTGACGCCGTCTGTGGGAA
CATTGTTTTAACATTCTCAAGTCGTTTTCCTACCGAAAAACTGAAGCAAGCAATGACAGGTTTATGGCTGTCCCACATTCCTAACCCTGCTGAGAGGTGGGAGGGAGAGC
GTCGAATCTATGCCCGATGGACTTACTCCCAAGTGGCGGGTACCTCTAACGATCGCGTTCTGGCTGGTGAGCAACGCAACAATGCGGAGCATCCCCCAGCTGGTGACAGG
CTGAATGGCCCACCCAGCGTCGACCCAAGCATAGTAGCCAACGCAATAACTGAGATTGCGGAAGTCAAGGCTCGCCTCTCTGCAATGGAGCGAGCCGAAGGCGAGTTGAC
CCCCTTCATCGTCCGCGACCCGCATAAGGGGAAAGGTCCTACTAACCCGAACCCTAAGAATCGGGAGAGAGGATTGCCTGATCTGCTAGGGGCTACATCAACCCCCCTCG
CCGTCCCGAAGGAATCCATATTGGCATTGGTTTTGTCTTTTCGAGCTCTATGCTATGAACACTTTGAAACACTCAAATTGTTAGTTTATACTTGGTTTGTGATCATCAAA
ATATTTGGTTTGATTGAAGCTATAAAGCTAAAACGTCACTCCGACCTGGAGGCCTTGCGCCACAAGAAAAAGGCTCCGGGTGACTTGAGGTCCAAGATGGACCAGCTCAG
GGAGATGATGCAGAAGGAAATCGAATACCTCGAAAATAACTATAAGGCTCCTCGCCAGGTTGACTTCTCAGAACGGGAGAAGCCCCAGTTCACTCAGGACATCCTGGACG
AACCGATCCCCCACAAATTTAATGCCCCTATTATAAACCTGTATGATGGGTTGGGAGATCCTATCTCATACGTGGAGGTATTCGAAGGAAAGATGGAGTTTCTCGCAGCA
AGTGATGCCATCAAGTGCCGAGCCTTCCAGATCGCTCTAGAAGGCTCGGCTCGGTTATGGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATTCCACACAGAAGCTAAGTATATATGTCTCGACTCATTCCCTTGGCCGAGTCGATTATCCTTAGTGGCCAAGCCGAACAAGTCTGCTAAAGATCGCGCTCC
CATACTACTGGCTGAGCCGGTTGACTTATCTAAGCTCGGTCACACCTCTAACATACTCCACAACAACACGCCACGTTTCACGGTCTGCTACCTAACGTTTGAAGCTCACT
ACCCAGCTCATCTAGTCCGAGCCGACGTTCGCGAACTGTCCCACACTCCTAACCCTGCTGAGGGGTGGGAGGGAGAGCGCCGAATCTATGCCCGATGGACTTACTCCCAA
GTGGCGGGTACCTCTAACGATCGCGTTCTGGATGGTGAGCAACGCAACAATGCGGAGCATCCCCCAGCTGGTGACAAGCCGAATGGCCCGCCCGTTCCTGATAACCGGGG
AGAGTTCCCCCCTCTTCCCCCATGCCCATCGACTGTCCCGGGGTGGGGGCATGTCTGCGCTCGCTCGGGTCAGAGCGTCGACCCAAGCATAGTAGCCAACGCTTTGGCCG
AGCCGAACAAGTCTGCTAAAGATCGCGCTCCCATACTACTGGTTGAGCCGGTTGACTTACATCAGCTCGGTCACATCTCCGACATACTCCACGACAACACTCCACGTTTC
ACGTTCTGCTACCTGACGTTTGAAGCTCACTACCCAGCTCATCTAGTTCAAGCCGACATTCGCGAAGCTAGTAGATTTCTTGATTCAACATTTGACGCCGTCTGTGGGAA
CATTGTTTTAACATTCTCAAGTCGTTTTCCTACCGAAAAACTGAAGCAAGCAATGACAGGTTTATGGCTGTCCCACATTCCTAACCCTGCTGAGAGGTGGGAGGGAGAGC
GTCGAATCTATGCCCGATGGACTTACTCCCAAGTGGCGGGTACCTCTAACGATCGCGTTCTGGCTGGTGAGCAACGCAACAATGCGGAGCATCCCCCAGCTGGTGACAGG
CTGAATGGCCCACCCAGCGTCGACCCAAGCATAGTAGCCAACGCAATAACTGAGATTGCGGAAGTCAAGGCTCGCCTCTCTGCAATGGAGCGAGCCGAAGGCGAGTTGAC
CCCCTTCATCGTCCGCGACCCGCATAAGGGGAAAGGTCCTACTAACCCGAACCCTAAGAATCGGGAGAGAGGATTGCCTGATCTGCTAGGGGCTACATCAACCCCCCTCG
CCGTCCCGAAGGAATCCATATTGGCATTGGTTTTGTCTTTTCGAGCTCTATGCTATGAACACTTTGAAACACTCAAATTGTTAGTTTATACTTGGTTTGTGATCATCAAA
ATATTTGGTTTGATTGAAGCTATAAAGCTAAAACGTCACTCCGACCTGGAGGCCTTGCGCCACAAGAAAAAGGCTCCGGGTGACTTGAGGTCCAAGATGGACCAGCTCAG
GGAGATGATGCAGAAGGAAATCGAATACCTCGAAAATAACTATAAGGCTCCTCGCCAGGTTGACTTCTCAGAACGGGAGAAGCCCCAGTTCACTCAGGACATCCTGGACG
AACCGATCCCCCACAAATTTAATGCCCCTATTATAAACCTGTATGATGGGTTGGGAGATCCTATCTCATACGTGGAGGTATTCGAAGGAAAGATGGAGTTTCTCGCAGCA
AGTGATGCCATCAAGTGCCGAGCCTTCCAGATCGCTCTAGAAGGCTCGGCTCGGTTATGGTACTAG
Protein sequenceShow/hide protein sequence
MDSFHTEAKYICLDSFPWPSRLSLVAKPNKSAKDRAPILLAEPVDLSKLGHTSNILHNNTPRFTVCYLTFEAHYPAHLVRADVRELSHTPNPAEGWEGERRIYARWTYSQ
VAGTSNDRVLDGEQRNNAEHPPAGDKPNGPPVPDNRGEFPPLPPCPSTVPGWGHVCARSGQSVDPSIVANALAEPNKSAKDRAPILLVEPVDLHQLGHISDILHDNTPRF
TFCYLTFEAHYPAHLVQADIREASRFLDSTFDAVCGNIVLTFSSRFPTEKLKQAMTGLWLSHIPNPAERWEGERRIYARWTYSQVAGTSNDRVLAGEQRNNAEHPPAGDR
LNGPPSVDPSIVANAITEIAEVKARLSAMERAEGELTPFIVRDPHKGKGPTNPNPKNRERGLPDLLGATSTPLAVPKESILALVLSFRALCYEHFETLKLLVYTWFVIIK
IFGLIEAIKLKRHSDLEALRHKKKAPGDLRSKMDQLREMMQKEIEYLENNYKAPRQVDFSEREKPQFTQDILDEPIPHKFNAPIINLYDGLGDPISYVEVFEGKMEFLAA
SDAIKCRAFQIALEGSARLWY