; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g15830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g15830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionexopolygalacturonase-like
Genome locationchr8:12185279..12186850
RNA-Seq ExpressionMoc08g15830
SyntenyMoc08g15830
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135905.1 exopolygalacturonase-like [Momordica charantia]1.8e-9152.37Show/hide
Query:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------
        M  IKSSFL+AA L+LLL F    +SRVD  + L KYG + SGADV+QAL +AWKDACASVRPS +VIP GIFKV                         
Subjt:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------

Query:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------
                              VF   +G+ GWEKNDCHKSINCAKLPI                                                   
Subjt:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------

Query:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM
                                         VTNVTCGPGHGISIGSLG+YTKEEPV+GVIV+NCTI+NTTNGVRIKTWPAS  T TATNMHF+DIIM
Subjt:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM

Query:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        +NVS+PILIDQEYCPWNQCNRQIPSKIK+SKV+FKNIRGSSATPVAVKLICSSGL C EV++ DIDLTY+GI GPVTSQC
Subjt:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

XP_022927477.1 exopolygalacturonase-like [Cucurbita moschata]7.9e-8449.61Show/hide
Query:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS I+SSFLIA  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GIFKVK                       
Subjt:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

XP_022933298.1 exopolygalacturonase-like [Cucurbita moschata]7.9e-8449.61Show/hide
Query:  MSMIKSSFLIA-ALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS I+SSFLIA  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GIFKVK                       
Subjt:  MSMIKSSFLIA-ALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

XP_022970272.1 exopolygalacturonase-like [Cucurbita maxima]1.0e-8349.34Show/hide
Query:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS IKSSFL+A  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GI+KVK                       
Subjt:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI+GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

XP_038887188.1 exopolygalacturonase-like [Benincasa hispida]9.4e-8549.21Show/hide
Query:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------
        MS+I SS ++   L+ LL+F    QSRVD  FPL KYG I  G DVT+AL DAW DACASVRP  +VIP GIFKV                         
Subjt:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------

Query:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------
                              VF   +G  GWEKNDCHK+INCA LPI                                                   
Subjt:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------

Query:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM
                                         VTNVTCGPGHGISIGSLGKYT EEPVEGVI++NCTI+NTTNGVRIKTWPASP + TATNMHF DIIM
Subjt:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM

Query:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        +NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGSSATP+AVKLICS  L C EV+VA+IDL Y+G +GP+ S C
Subjt:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

TrEMBL top hitse value%identityAlignment
A0A6J1C2C8 exopolygalacturonase-like8.5e-9252.37Show/hide
Query:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------
        M  IKSSFL+AA L+LLL F    +SRVD  + L KYG + SGADV+QAL +AWKDACASVRPS +VIP GIFKV                         
Subjt:  MSMIKSSFLIAALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK------------------------

Query:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------
                              VF   +G+ GWEKNDCHKSINCAKLPI                                                   
Subjt:  ----------------------VFSMAKGENGWEKNDCHKSINCAKLPI---------------------------------------------------

Query:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM
                                         VTNVTCGPGHGISIGSLG+YTKEEPV+GVIV+NCTI+NTTNGVRIKTWPAS  T TATNMHF+DIIM
Subjt:  ---------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIM

Query:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        +NVS+PILIDQEYCPWNQCNRQIPSKIK+SKV+FKNIRGSSATPVAVKLICSSGL C EV++ DIDLTY+GI GPVTSQC
Subjt:  INVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

A0A6J1EHA1 exopolygalacturonase-like3.8e-8449.61Show/hide
Query:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS I+SSFLIA  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GIFKVK                       
Subjt:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

A0A6J1EWD3 exopolygalacturonase-like6.6e-8449.61Show/hide
Query:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS I+SSFLIA  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GIFKVK                       
Subjt:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV+NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

A0A6J1F4C6 exopolygalacturonase-like3.8e-8449.61Show/hide
Query:  MSMIKSSFLIA-ALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS I+SSFLIA  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GIFKVK                       
Subjt:  MSMIKSSFLIA-ALLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

A0A6J1HYN0 exopolygalacturonase-like5.0e-8449.34Show/hide
Query:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------
        MS IKSSFL+A  L++LLL F    QS  D  FPL +YG I  G D+T+AL +AWKDAC S R S IVIP GI+KVK                       
Subjt:  MSMIKSSFLIAA-LLILLLAFISHVQSRVD--FPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVK-----------------------

Query:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------
                               VF   +G+  W+KNDCHK INCA+LPI                                                  
Subjt:  -----------------------VFSMAKGENGWEKNDCHKSINCAKLPI--------------------------------------------------

Query:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII
                                          +TNVTCGPGHGISIGSLG+YT EEPVEGVIV NCTIINTTNGVRIKTWPAS A+ TATNM FLDII
Subjt:  ----------------------------------VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDII

Query:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        M+NVSNPILIDQEYCPWNQCNR+IPSKIK+SKVSFKNIRGS ATPVA+KLICS  L C EV+V DIDLTY+GI+GP+TSQC
Subjt:  MINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)3.5e-5058.64Show/hide
Query:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC
        +DC    + +K   +TN+TCGPGHGIS+GSLG+Y  EE V G+ V+NCTI  + NGVRIKTWP S   + A+ MHF DI M +V  PILIDQ YCP+NQC
Subjt:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC

Query:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQCK
          ++PS +KLSK+SFKNI+G+S T  AVKL+CS    C  VE+ADIDLTYSG  GP TS C+
Subjt:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQCK

P24548 Exopolygalacturonase (Fragment)6.5e-0455.56Show/hide
Query:  DVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSM
        D TQALT AWK+ACAS  PS I++P G F V + ++
Subjt:  DVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSM

Q05967 Polygalacturonase7.3e-4834.86Show/hide
Query:  ALLILLLAFISHVQSRVDFPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIF----------------------------------------
        AL++L LA     Q+ V F ++KYG   S AD+++AL +A+K+AC S  PS IVIP G F                                        
Subjt:  ALLILLLAFISHVQSRVDFPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIF----------------------------------------

Query:  -KVKVFSMAKG-------ENGWEKNDCHKSINCAKLP---------------------------------------------------------------
         K+  F+M+ G          WE   C +S  C KLP                                                               
Subjt:  -KVKVFSMAKG-------ENGWEKNDCHKSINCAKLP---------------------------------------------------------------

Query:  ---------------------IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQ
                              +T VTCGPGHGIS+GSLG    E+PV GV V+NCT  NT NGVRIKTWPAS       ++HF DII+ NVSNP++IDQ
Subjt:  ---------------------IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQ

Query:  EYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQCK
         YCP+N+CN+ +PS++K+SKVSF+NI+G+S T  AV L+ S G+ C  +EV DID+TYSG +GP  S C+
Subjt:  EYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQCK

Q39766 Polygalacturonase1.5e-4856.52Show/hide
Query:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC
        +DC    +  K  ++  +TCGPGHGISIGSLGK+  EEPVEG+ + NCTI NT+NG RIKTWP        + +HF DI M NVS+PILIDQ+YCPWN+C
Subjt:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC

Query:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
         +   SK+KLS +SFKNIRG+SA P A+K ICS    C  VE+ADID+ ++G + P TSQC
Subjt:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

Q39766 Polygalacturonase1.7e-0440.91Show/hide
Query:  LIAALLILLLAFI--SHVQSRVDFPLSKYGVITSG-ADVTQALTDAWKDACASVRPSVIVIPSGIF
        ++ ++ +LLL FI  S VQ      ++K+G    G  D+++   DAWK+ACASV PS +VIP G +
Subjt:  LIAALLILLLAFI--SHVQSRVDFPLSKYGVITSG-ADVTQALTDAWKDACASVRPSVIVIPSGIF

Q39786 Polygalacturonase1.1e-4833.87Show/hide
Query:  LIAALLILLLAFI--SHVQSRVDFPLSKYGVITSG-ADVTQALTDAWKDACASVRPSVIVIPSG------------------------------------
        ++ ++ +LLL FI  S VQS     ++K+G    G  D+++   DAWK+ACASV PS +VIP G                                    
Subjt:  LIAALLILLLAFI--SHVQSRVDFPLSKYGVITSG-ADVTQALTDAWKDACASVRPSVIVIPSG------------------------------------

Query:  -----IFKVKVFSM-------AKGENGWEKNDCHKSINCAKLP---------------------------------------------------------
              + V+ F M        +G   +EKN C      +KLP                                                         
Subjt:  -----IFKVKVFSM-------AKGENGWEKNDCHKSINCAKLP---------------------------------------------------------

Query:  ---------------------------IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSN
                                   ++  +TCGPGHGISIGSLGK+  EEPVEG+ + NCTI NT+NG RIKTWP        + +HF DI M NVS+
Subjt:  ---------------------------IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSN

Query:  PILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        PILIDQ+YCPWN+C +   SK+KLS +SFKNIRG+SA P A+K ICS    C  VE+ADID+ ++G + P TSQC
Subjt:  PILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

Q40312 Polygalacturonase5.6e-4855.28Show/hide
Query:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC
        +DC    + +K   V  V CGPGHG+S+GSLGK+T EE VEG+ V+NCT+  T NGVRIKTWP +P T T +++HF DI M NV NP++IDQEY PWNQC
Subjt:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC

Query:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        +++ PSKIKLSK+SFKN++G+S T   V LICSS + C  VE+ ++DL ++G   P T++C
Subjt:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein7.7e-5335.48Show/hide
Query:  TSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSM-----------------------------------------------AKGENGWEKNDCH
        +SG+D+TQAL  A+  AC S  PS +VIP G FK+    M                                                +G   W  N+CH
Subjt:  TSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSM-----------------------------------------------AKGENGWEKNDCH

Query:  KSINCAKLPI------------------------------------------------------------------------------------VTNVTC
        K+  C KLPI                                                                                    V  VTC
Subjt:  KSINCAKLPI------------------------------------------------------------------------------------VTNVTC

Query:  GPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRG
        GPGHGIS+GSLG+Y  E+ V G+ V NCT+  T NG+RIKTWP++  + TA+++HF DII+ +VSNPILIDQEYCPWNQCN+Q  S IKL  +SFKNIRG
Subjt:  GPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRG

Query:  SSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        +S    AVKL+CS G  C  VE+ DID+ Y+G DGP T  C
Subjt:  SSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

AT3G07830.1 Pectin lyase-like superfamily protein9.4e-5134.51Show/hide
Query:  GADVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSMA-----------------------------------------------KGENGWEKNDCHKS
        G+D+TQAL  A+  AC S  P  +VIP G FK+    M+                                               +G   W  N+CHK+
Subjt:  GADVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSMA-----------------------------------------------KGENGWEKNDCHKS

Query:  INCAKLPI------------------------------------------------------------------------------------VTNVTCGP
          C KLPI                                                                                    V NV CGP
Subjt:  INCAKLPI------------------------------------------------------------------------------------VTNVTCGP

Query:  GHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSS
        GHGIS+GSLG+Y  E+ V G+ V NCT+  T NG+RIKTWP++  + TA+N+HF +II+ NVSNPILIDQEYCPWNQCN+Q  S IKL+ +SF+ IRG+S
Subjt:  GHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSS

Query:  ATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
            AVKL+CS G  C  V+V DI++ Y+G DGP T  C
Subjt:  ATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

AT3G07840.1 Pectin lyase-like superfamily protein1.4e-4960.54Show/hide
Query:  VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVS
        V NV CGPGHGIS+GSLG+Y  E+ V G+ V NCT+  T NG+RIKTWP++    TA+ +HF +II+ NVSNPILIDQEYCPWNQCN+Q PS IKL  +S
Subjt:  VTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVS

Query:  FKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        FKNIRG+S    AVKL+CS    C  VE+ +I+L Y G DGP T  C
Subjt:  FKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

AT3G14040.1 Pectin lyase-like superfamily protein2.8e-4760.14Show/hide
Query:  IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKV
        IV NV CGPGHGISIGSLG+Y  E+PV+GV V+ C I NT NGVRIKTWP SP    A+N+ F DI M NVS P+LIDQEYCP+  C   +PSK+KLS V
Subjt:  IVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKV

Query:  SFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        + KNI+G+SAT VAVKL+CS G+ C  + ++DI+L ++G +GP  S C
Subjt:  SFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC

AT5G48140.1 Pectin lyase-like superfamily protein1.0e-5258.39Show/hide
Query:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC
        +DC    +  K  +V  VTCGPGHGISIGSLG+Y+ EE V G+ + NCT+  T NG+RIKTWP++  T TA+++HF +I++ NVSNPILIDQEYCPWNQC
Subjt:  NDCHKSINCAKLPIVTNVTCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQC

Query:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC
        N+Q PS IKL+ +SFK IRG+S    AVKL+CS G  C  VEV D+++ Y+G DGP T QC
Subjt:  NRQIPSKIKLSKVSFKNIRGSSATPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGATCAAATCGAGCTTCTTGATCGCTGCATTATTGATCCTGTTGTTAGCATTTATTTCTCACGTTCAATCTCGTGTTGATTTCCCTTTGAGCAAATAC
GGTGTTATAACATCTGGTGCCGATGTCACTCAAGCTTTGACAGATGCATGGAAGGATGCATGTGCATCCGTTCGTCCTAGTGTAATAGTTATCCCGAGTGGGATA
TTTAAAGTGAAGGTGTTTTCGATGGCCAAAGGAGAAAATGGTTGGGAAAAGAATGATTGCCACAAAAGCATAAATTGTGCTAAGCTTCCCATTGTCACCAATGTG
ACATGTGGGCCAGGACATGGCATCAGCATAGGCAGTCTTGGAAAATACACTAAAGAAGAACCTGTGGAAGGTGTCATAGTACAAAACTGCACCATAATAAACACC
ACTAATGGTGTGAGGATTAAAACATGGCCAGCTTCTCCAGCCACTGACACAGCCACCAACATGCATTTTTTGGACATTATAATGATCAATGTTAGCAATCCTATT
CTCATAGACCAAGAATATTGCCCATGGAATCAATGCAATCGTCAGATTCCATCAAAGATAAAGTTAAGTAAAGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCA
ACTCCAGTAGCAGTCAAACTCATTTGTAGTAGTGGCCTGGGTTGTGGTGAGGTAGAAGTAGCTGATATTGACCTTACTTACAGTGGAATAGATGGTCCTGTTACA
TCCCAATGTAAAATCCATCGTTACCGGAAAACAGAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGATCAAATCGAGCTTCTTGATCGCTGCATTATTGATCCTGTTGTTAGCATTTATTTCTCACGTTCAATCTCGTGTTGATTTCCCTTTGAGCAAATAC
GGTGTTATAACATCTGGTGCCGATGTCACTCAAGCTTTGACAGATGCATGGAAGGATGCATGTGCATCCGTTCGTCCTAGTGTAATAGTTATCCCGAGTGGGATA
TTTAAAGTGAAGGTGTTTTCGATGGCCAAAGGAGAAAATGGTTGGGAAAAGAATGATTGCCACAAAAGCATAAATTGTGCTAAGCTTCCCATTGTCACCAATGTG
ACATGTGGGCCAGGACATGGCATCAGCATAGGCAGTCTTGGAAAATACACTAAAGAAGAACCTGTGGAAGGTGTCATAGTACAAAACTGCACCATAATAAACACC
ACTAATGGTGTGAGGATTAAAACATGGCCAGCTTCTCCAGCCACTGACACAGCCACCAACATGCATTTTTTGGACATTATAATGATCAATGTTAGCAATCCTATT
CTCATAGACCAAGAATATTGCCCATGGAATCAATGCAATCGTCAGATTCCATCAAAGATAAAGTTAAGTAAAGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCA
ACTCCAGTAGCAGTCAAACTCATTTGTAGTAGTGGCCTGGGTTGTGGTGAGGTAGAAGTAGCTGATATTGACCTTACTTACAGTGGAATAGATGGTCCTGTTACA
TCCCAATGTAAAATCCATCGTTACCGGAAAACAGAATCCTAA
Protein sequenceShow/hide protein sequence
MSMIKSSFLIAALLILLLAFISHVQSRVDFPLSKYGVITSGADVTQALTDAWKDACASVRPSVIVIPSGIFKVKVFSMAKGENGWEKNDCHKSINCAKLPIVTNV
TCGPGHGISIGSLGKYTKEEPVEGVIVQNCTIINTTNGVRIKTWPASPATDTATNMHFLDIIMINVSNPILIDQEYCPWNQCNRQIPSKIKLSKVSFKNIRGSSA
TPVAVKLICSSGLGCGEVEVADIDLTYSGIDGPVTSQCKIHRYRKTES