; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g15980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g15980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr8:12286704..12289848
RNA-Seq ExpressionMoc08g15980
SyntenyMoc08g15980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]2.3e-4661.86Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        SSLKAQVQAL   +SKLS  GT HSNELV   DTYSYY EPTIEQAQ                                              FTS P  
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI
        KKSSLEDLL AF NE RSRASRIENQVEGMEVKLEGNTT++KNM+VQIGQIA TLNTMQK KFPSD EV PREHCK VTLRSGKELQE EKK++
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI

XP_023881727.1 uncharacterized protein LOC111994101 [Quercus suber]2.8e-3644.39Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L AQV +L+  +S L+      S E V  +       E + EQ QY+NNRN+ Y+G    N +P +YHP LR HENFSY N +NV+QPL GF SQP+ 
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQ
        KK SLED + +F  E+++R  + +++++ +E        T+KN++VQIGQ+A+T+N  Q+  FPS+ EVNP+E CK +TLRSG+E++
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQ

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]5.6e-3745.08Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L AQV +L+  +S LS      S E V  +       E + EQ QY+NNRN+ Y+G    N +P +YHP LR HENFSY N +NV+QP  GF SQP+ 
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE
        KK SLED + +F  E+++R  + +++++ +E        TMKN++VQIGQ+A+T+N  Q+  FPS+TEVNP+E CK +TLRSG+E++    KE
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE

XP_024020480.1 uncharacterized protein LOC112091333 [Morus notabilis]1.0e-3849.74Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        +SL AQV AL+  ++ L+      S E V  A T     E T EQ Q+VNNRNF YK NQ    LP HYHP LR HENFSYANNRNV+QP  GF  Q   
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE
        KK S+EDLL  F  E+R R ++ E +++ +E        TMK+++VQIGQ+A+T+      KFPSDTE NP +HCK +TLRSGKE++  + +E
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE

XP_030969898.1 uncharacterized protein LOC115990189 [Quercus lobata]2.1e-3644.33Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L  QV +L+  +S L+      S E V  +       E + EQ QY+NNRN+ Y+G    N +P +YHPRLR HENFSY N +NV+QP  GF SQP+ 
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI
        KK SLED + +F  E+++R  + +++++ +E        TMKN++VQIGQ+A+T+N  Q+  F S+TEVNP+E CK +TLRSG+E++    KEI
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008379.3e-3040Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPL--LGFTSQP
        +++ AQV  L+  +S L       S E V          E + EQ QY+NN+N+ Y+G    N +P H+HP LR HEN SY N +NV+QP    GF SQ 
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPL--LGFTSQP

Query:  TGKKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE
        + KK SLE+ + +F  E+ ++    ++Q++ +E         +KN++VQIGQ+A+T+N  Q+  FPS+TEVNP E  K +TLRSG+E+++   KE
Subjt:  TGKKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE

A0A2P5AMA4 Uncharacterized protein1.3e-3444.27Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L  QV AL + +S L+      S E + V++         +EQ  Y+NN NF Y+GN   N+LPTHYHP LR HENFSYANNRNV+QP LGF      
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKK
        KK SL+D+L  F  E++ R ++ E +++ +E        TMK+++VQI Q+A+++      KFPSDTE NP++HCK +TLRS KE++  ++K
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKK

A0A2P5B1T0 Uncharacterized protein3.4e-3243.32Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L AQV  L + +S L+      S E + V++         + Q  Y+NN NF Y+GN   N+LPTHYHP L  HENFSY NNRNV+QP  G       
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQ
        KK SLED+L  F  E+R R  + E  ++ +E        T+K+++VQIGQ+A+++      KFP+DTE NP+ HCK +TLRSGKE++
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQ

A0A6J1DU19 uncharacterized protein LOC1110243611.1e-4661.86Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        SSLKAQVQAL   +SKLS  GT HSNELV   DTYSYY EPTIEQAQ                                              FTS P  
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI
        KKSSLEDLL AF NE RSRASRIENQVEGMEVKLEGNTT++KNM+VQIGQIA TLNTMQK KFPSD EV PREHCK VTLRSGKELQE EKK++
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI

A0A6P9DWY0 uncharacterized protein LOC1183440263.1e-3343.01Show/hide
Query:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG
        ++L AQV +L+  +S L+      S E V          E + EQ QY+NNRN+ Y+G    N +P +YH  LR HEN SY N +NV+QP  GF SQP+ 
Subjt:  SSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQAQYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTG

Query:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE
        KK SLED + +F  E+ +R  + +++++ +E         +KN++VQIGQ+A+T+N  Q+  FPS+TEVNPRE CK +TLRSG+EL      E
Subjt:  KKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLNTMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGTACATATTCCGAGGACTCTCTGAAGCAGGGGGTTTTTCTGGAAGCTGCTGCTTATCAGCTGACTTAGACACGAATGCTTTAGCTTTCCCTGATTTAGATGC
CCTTTCAGTGTTCTTATCCCCATACACTTGTTGCTTTGATTCTACCGTTTCAGTTCTGGAAGCTTTTGGTTGGTCTGTTGATTCTTCCCTAAAAGCTCAAGTTCAAGCTT
TGAATACTACTATGTCTAAACTTTCAAGAACAGGAACTTTGCATTCAAATGAGTTGGTGGTAGTAGCAGATACATATTCTTACTATATGGAGCCAACCATTGAGCAAGCT
CAGTATGTCAATAATAGAAATTTTGGCTACAAGGGGAATCAGCAACAAAACTCATTGCCAACACACTATCATCCAAGATTGAGGACTCATGAAAATTTTTCTTATGCTAA
CAACAGGAATGTTATGCAACCTTTACTAGGTTTCACATCTCAGCCAACTGGAAAGAAATCATCCCTCGAGGATTTACTTAGGGCTTTCACCAATGAGTCCAGGAGTCGAG
CTAGTCGGATTGAAAACCAGGTAGAAGGCATGGAAGTTAAATTAGAAGGAAACACAACTACCATGAAGAATATGAAGGTTCAGATAGGGCAAATAGCATCCACCTTGAAC
ACTATGCAGAAATGGAAGTTTCCAAGTGACACTGAAGTTAACCCACGAGAACATTGCAAAATCGTCACTTTGAGAAGTGGAAAGGAACTACAGGAGCATGAAAAGAAAGA
AATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGTACATATTCCGAGGACTCTCTGAAGCAGGGGGTTTTTCTGGAAGCTGCTGCTTATCAGCTGACTTAGACACGAATGCTTTAGCTTTCCCTGATTTAGATGC
CCTTTCAGTGTTCTTATCCCCATACACTTGTTGCTTTGATTCTACCGTTTCAGTTCTGGAAGCTTTTGGTTGGTCTGTTGATTCTTCCCTAAAAGCTCAAGTTCAAGCTT
TGAATACTACTATGTCTAAACTTTCAAGAACAGGAACTTTGCATTCAAATGAGTTGGTGGTAGTAGCAGATACATATTCTTACTATATGGAGCCAACCATTGAGCAAGCT
CAGTATGTCAATAATAGAAATTTTGGCTACAAGGGGAATCAGCAACAAAACTCATTGCCAACACACTATCATCCAAGATTGAGGACTCATGAAAATTTTTCTTATGCTAA
CAACAGGAATGTTATGCAACCTTTACTAGGTTTCACATCTCAGCCAACTGGAAAGAAATCATCCCTCGAGGATTTACTTAGGGCTTTCACCAATGAGTCCAGGAGTCGAG
CTAGTCGGATTGAAAACCAGGTAGAAGGCATGGAAGTTAAATTAGAAGGAAACACAACTACCATGAAGAATATGAAGGTTCAGATAGGGCAAATAGCATCCACCTTGAAC
ACTATGCAGAAATGGAAGTTTCCAAGTGACACTGAAGTTAACCCACGAGAACATTGCAAAATCGTCACTTTGAGAAGTGGAAAGGAACTACAGGAGCATGAAAAGAAAGA
AATTTAA
Protein sequenceShow/hide protein sequence
MLMYIFRGLSEAGGFSGSCCLSADLDTNALAFPDLDALSVFLSPYTCCFDSTVSVLEAFGWSVDSSLKAQVQALNTTMSKLSRTGTLHSNELVVVADTYSYYMEPTIEQA
QYVNNRNFGYKGNQQQNSLPTHYHPRLRTHENFSYANNRNVMQPLLGFTSQPTGKKSSLEDLLRAFTNESRSRASRIENQVEGMEVKLEGNTTTMKNMKVQIGQIASTLN
TMQKWKFPSDTEVNPREHCKIVTLRSGKELQEHEKKEI