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Moc08g16360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag-pro-like protein
Genome locationchr8:12549771..12551895
RNA-Seq ExpressionMoc08g16360
SyntenyMoc08g16360
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037620.1 Gag-pro-like protein [Cucumis melo var. makuwa]2.9e-2372.22Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AY+ NDKLL+HCFQDSL+GPASR Y+QLD++H+  WK+L ++FLKQYKHNIDMAP+RLDLQRMEK ++
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]5.1e-2888.89Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLS PASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.0e-2890.28Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLSGPASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]8.1e-2635.71Show/hide
Query:  KKLSRRKQGK-IEKLCEKLDDILLALEKSKTVANPAISSNSVHEPQETPPYPP-----------------------------------------------
        +K  + K  K IE+L EKLD I L LEK K  A+PA SSN +HEPQETPPYPP                                               
Subjt:  KKLSRRKQGK-IEKLCEKLDDILLALEKSKTVANPAISSNSVHEPQETPPYPP-----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------RKMTAY
                                                                                                      RKM AY
Subjt:  ----------------------------------------------------------------------------------------------RKMTAY

Query:  VQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        VQN KLLIHCFQDSL G ASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK++T
Subjt:  VQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]6.6e-2888.89Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLSGPASR YMQLDSS+VGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

TrEMBL top hitse value%identityAlignment
A0A5D3BY24 Gag-pro-like protein1.4e-2372.22Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AY+ NDKLL+HCFQDSL+GPASR Y+QLD++H+  WK+L ++FLKQYKHNIDMAP+RLDLQRMEK ++
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

A0A6J1CNY7 Ribonuclease H2.5e-2888.89Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLS PASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

A0A6J1D099 Ribonuclease H5.0e-2990.28Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLSGPASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

A0A6J1DZ90 Ribonuclease H3.9e-2635.71Show/hide
Query:  KKLSRRKQGK-IEKLCEKLDDILLALEKSKTVANPAISSNSVHEPQETPPYPP-----------------------------------------------
        +K  + K  K IE+L EKLD I L LEK K  A+PA SSN +HEPQETPPYPP                                               
Subjt:  KKLSRRKQGK-IEKLCEKLDDILLALEKSKTVANPAISSNSVHEPQETPPYPP-----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------RKMTAY
                                                                                                      RKM AY
Subjt:  ----------------------------------------------------------------------------------------------RKMTAY

Query:  VQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        VQN KLLIHCFQDSL G ASR YMQLDSSHVGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK++T
Subjt:  VQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

A0A6J1E2J7 Ribonuclease H3.2e-2888.89Show/hide
Query:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT
        RKM AYVQNDKLLIHCFQDSLSGPASR YMQLDSS+VGSWKNL +SFLKQYKHNIDMAP+RLDLQRMEK +T
Subjt:  RKMTAYVQNDKLLIHCFQDSLSGPASRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGCGTAACTTATGCCCCATTAACGGTACTGCGCCAGATATGGGCTTGGAAAACGATTGTCAGAACCCAAGTGGCAATTACCACGATAATACATTTGAA
GAATACGAACAGTTGCATTCGAATAGGGGAAAAACTGTGGTTCTCCTAACGACTGACAAGGGCAAAGGGAAGCTAGAGGTTCCCACTAGAAGAATTCTTACCGAA
ATGAGCCCATATCAGCCCAGTCAGCGAAAGGCAAGAAGAAAGGTCGATTACCAAGGAAAAGAAAACAGACCGCTGGAACTAGATGTTCGGGACCCTAACAGAAGA
ATGTACCAAGCTACTGTGTTGGAGGAGAAAGAAGTACAGTTAGCTCAGTATGCCAAAGTAAATCAAAGATTGAGGAAAACTGTTCAGGTACTTATGAGCCGTCAA
GACAAAACTCAGAATGTTGCTGATGGGTTAATGCAGGATTATACCCATATTTGGGAACAATACAACCAAGTGGAGTATGAATTAGACTATGTGAAGCGCGATAAC
ACAAGGTTACATCATAATTCAGAACATGTGCTCACTCAAGTCAGGCAGGTAGCTCGAAGGGCAGATGGTTTAGCTGAAGAGGCACGAACTCTCACGTCTGCCATT
GCCCATACACAGCCGAATGACAAAAGCACACTCAAGTCATTGGCAAACTTCGACTCGACGAGATTTAGAGCATTGGGGACAATCAAAAAGCTGAGCAGGAGAAAA
CAAGGAAAGATTGAGAAGTTGTGCGAAAAGTTAGATGACATCCTTCTCGCGTTGGAAAAAAGCAAGACGGTTGCAAATCCTGCTATATCTAGCAACTCCGTCCAT
GAGCCGCAAGAAACCCCGCCTTATCCACCTAGGAAGATGACAGCGTACGTTCAAAATGACAAACTGTTAATACACTGCTTTCAAGATAGTTTATCTGGTCCAGCT
TCTCGTTGCTACATGCAGTTAGATAGCTCTCATGTCGGTTCGTGGAAGAATCTGGTCGAATCCTTCCTAAAGCAATATAAGCATAACATAGATATGGCTCCAGAG
CGTTTGGATTTGCAGAGGATGGAAAAGAGTAACACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGCGTAACTTATGCCCCATTAACGGTACTGCGCCAGATATGGGCTTGGAAAACGATTGTCAGAACCCAAGTGGCAATTACCACGATAATACATTTGAA
GAATACGAACAGTTGCATTCGAATAGGGGAAAAACTGTGGTTCTCCTAACGACTGACAAGGGCAAAGGGAAGCTAGAGGTTCCCACTAGAAGAATTCTTACCGAA
ATGAGCCCATATCAGCCCAGTCAGCGAAAGGCAAGAAGAAAGGTCGATTACCAAGGAAAAGAAAACAGACCGCTGGAACTAGATGTTCGGGACCCTAACAGAAGA
ATGTACCAAGCTACTGTGTTGGAGGAGAAAGAAGTACAGTTAGCTCAGTATGCCAAAGTAAATCAAAGATTGAGGAAAACTGTTCAGGTACTTATGAGCCGTCAA
GACAAAACTCAGAATGTTGCTGATGGGTTAATGCAGGATTATACCCATATTTGGGAACAATACAACCAAGTGGAGTATGAATTAGACTATGTGAAGCGCGATAAC
ACAAGGTTACATCATAATTCAGAACATGTGCTCACTCAAGTCAGGCAGGTAGCTCGAAGGGCAGATGGTTTAGCTGAAGAGGCACGAACTCTCACGTCTGCCATT
GCCCATACACAGCCGAATGACAAAAGCACACTCAAGTCATTGGCAAACTTCGACTCGACGAGATTTAGAGCATTGGGGACAATCAAAAAGCTGAGCAGGAGAAAA
CAAGGAAAGATTGAGAAGTTGTGCGAAAAGTTAGATGACATCCTTCTCGCGTTGGAAAAAAGCAAGACGGTTGCAAATCCTGCTATATCTAGCAACTCCGTCCAT
GAGCCGCAAGAAACCCCGCCTTATCCACCTAGGAAGATGACAGCGTACGTTCAAAATGACAAACTGTTAATACACTGCTTTCAAGATAGTTTATCTGGTCCAGCT
TCTCGTTGCTACATGCAGTTAGATAGCTCTCATGTCGGTTCGTGGAAGAATCTGGTCGAATCCTTCCTAAAGCAATATAAGCATAACATAGATATGGCTCCAGAG
CGTTTGGATTTGCAGAGGATGGAAAAGAGTAACACATAA
Protein sequenceShow/hide protein sequence
MEMRNLCPINGTAPDMGLENDCQNPSGNYHDNTFEEYEQLHSNRGKTVVLLTTDKGKGKLEVPTRRILTEMSPYQPSQRKARRKVDYQGKENRPLELDVRDPNRR
MYQATVLEEKEVQLAQYAKVNQRLRKTVQVLMSRQDKTQNVADGLMQDYTHIWEQYNQVEYELDYVKRDNTRLHHNSEHVLTQVRQVARRADGLAEEARTLTSAI
AHTQPNDKSTLKSLANFDSTRFRALGTIKKLSRRKQGKIEKLCEKLDDILLALEKSKTVANPAISSNSVHEPQETPPYPPRKMTAYVQNDKLLIHCFQDSLSGPA
SRCYMQLDSSHVGSWKNLVESFLKQYKHNIDMAPERLDLQRMEKSNT