; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g16450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:12657201..12661318
RNA-Seq ExpressionMoc08g16450
SyntenyMoc08g16450
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8532888.1 hypothetical protein F0562_032995 [Nyssa sinensis]2.1e-1436.99Show/hide
Query:  LKVIIDKLVVVSVSLDDKEILIYTFNGLPLVFNSFHTSIRTCSDSLTLENLHVMLEVEEQSLNQHTKASE--LIPTAMVAYRGTSTFQDGNNGGSLNHGR
        +K I DKL  VSV ++D+++LI T NGLP  +++F TSIRT SD +T E L V+L+ EE S  +H+K ++   IPT M    G +     +    LN   
Subjt:  LKVIIDKLVVVSVSLDDKEILIYTFNGLPLVFNSFHTSIRTCSDSLTLENLHVMLEVEEQSLNQHTKASE--LIPTAMVAYRGTSTFQDGNNGGSLNHGR

Query:  NNRGNDRGDFPTSGKDPRPSTQLAAMAVNFMTLYSSQSNAFWLSDSGCNTHLTNDLTNISALQILTMEKMLGV
                  PT  +   PS QLAAMA +F +  +  ++  WL+DSG   H+TND++N+   +  T E  + +
Subjt:  NNRGNDRGDFPTSGKDPRPSTQLAAMAVNFMTLYSSQSNAFWLSDSGCNTHLTNDLTNISALQILTMEKMLGV

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.1e-2333.2Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W       DE   V+I     +L+ + ++LC +AK+ TS +I  +A RS MK++WRVH+ TR E    N++VI F+SL +K+RV++SGPW F 
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDIT---RLSVEVLSS-----ICPMVL
        K+L++L SP A + P  M                                 VEE+    +  W G FI V V +D++   R  +++ +S      CP  L
Subjt:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDIT---RLSVEVLSS-----ICPMVL

Query:  WYGVLVSM---SAYLGHSIRECDVPSDASISTSAP--YGDWLRATPLARA
         Y  L         +GHS REC+  S   ++T++P  YGDWLRAT L ++
Subjt:  WYGVLVSM---SAYLGHSIRECDVPSDASISTSAP--YGDWLRATPLARA

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.1e-1933.71Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W +  L +++   + I     L++ E +Q  A+ K+ TS +I ++AFRS MK++W+VH  T IE+A  N++VI F+S+ +KNRV+ SGPW FE
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDITR
         +L++L SP A D P  M                                 VEE+    S  W G FI V V +DI++
Subjt:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDITR

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]5.2e-1832.58Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+D+ + W +  LI++E   + I +   +L+ + IQLCA+ K+  S +I ++AF S MK +W++H+ TRIE+A  N++VI F+++ +K RV + GPW F+
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWP-------------------ESM--------------VEEVSWADSSPWIGSFIWVCVCLDI---TRLSVEVLSS-----ICPMVL
        K+L+ILV   A + P                   E M              VEEV    S  W+  F+WV V +++    R  ++V +S      CP  L
Subjt:  KALIILVSPMAEDWP-------------------ESM--------------VEEVSWADSSPWIGSFIWVCVCLDI---TRLSVEVLSS-----ICPMVL

Query:  WYGVLVSM---SAYLGHSIRE
         Y  L         +GHSIRE
Subjt:  WYGVLVSM---SAYLGHSIRE

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.0e-1740Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W +  L  +E     + +   +L+ E IQLC + K+ TS +I   A  S MK +W++H  TRIE+A  N++VI F+++++K RV++SGPW F+
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWP
        K+L +LVSP A D P
Subjt:  KALIILVSPMAEDWP

TrEMBL top hitse value%identityAlignment
A0A5J5ARL5 Retrotran_gag_3 domain-containing protein1.0e-1436.99Show/hide
Query:  LKVIIDKLVVVSVSLDDKEILIYTFNGLPLVFNSFHTSIRTCSDSLTLENLHVMLEVEEQSLNQHTKASE--LIPTAMVAYRGTSTFQDGNNGGSLNHGR
        +K I DKL  VSV ++D+++LI T NGLP  +++F TSIRT SD +T E L V+L+ EE S  +H+K ++   IPT M    G +     +    LN   
Subjt:  LKVIIDKLVVVSVSLDDKEILIYTFNGLPLVFNSFHTSIRTCSDSLTLENLHVMLEVEEQSLNQHTKASE--LIPTAMVAYRGTSTFQDGNNGGSLNHGR

Query:  NNRGNDRGDFPTSGKDPRPSTQLAAMAVNFMTLYSSQSNAFWLSDSGCNTHLTNDLTNISALQILTMEKMLGV
                  PT  +   PS QLAAMA +F +  +  ++  WL+DSG   H+TND++N+   +  T E  + +
Subjt:  NNRGNDRGDFPTSGKDPRPSTQLAAMAVNFMTLYSSQSNAFWLSDSGCNTHLTNDLTNISALQILTMEKMLGV

A0A6J1D765 uncharacterized protein LOC1110179022.0e-2333.2Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W       DE   V+I     +L+ + ++LC +AK+ TS +I  +A RS MK++WRVH+ TR E    N++VI F+SL +K+RV++SGPW F 
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDIT---RLSVEVLSS-----ICPMVL
        K+L++L SP A + P  M                                 VEE+    +  W G FI V V +D++   R  +++ +S      CP  L
Subjt:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDIT---RLSVEVLSS-----ICPMVL

Query:  WYGVLVSM---SAYLGHSIRECDVPSDASISTSAP--YGDWLRATPLARA
         Y  L         +GHS REC+  S   ++T++P  YGDWLRAT L ++
Subjt:  WYGVLVSM---SAYLGHSIRECDVPSDASISTSAP--YGDWLRATPLARA

A0A6J1DP89 uncharacterized protein LOC1110229321.0e-1933.71Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W +  L +++   + I     L++ E +Q  A+ K+ TS +I ++AFRS MK++W+VH  T IE+A  N++VI F+S+ +KNRV+ SGPW FE
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDITR
         +L++L SP A D P  M                                 VEE+    S  W G FI V V +DI++
Subjt:  KALIILVSPMAEDWPESM---------------------------------VEEVSWADSSPWIGSFIWVCVCLDITR

A0A6J1DVS4 uncharacterized protein LOC1110235552.5e-1832.58Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+D+ + W +  LI++E   + I +   +L+ + IQLCA+ K+  S +I ++AF S MK +W++H+ TRIE+A  N++VI F+++ +K RV + GPW F+
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWP-------------------ESM--------------VEEVSWADSSPWIGSFIWVCVCLDI---TRLSVEVLSS-----ICPMVL
        K+L+ILV   A + P                   E M              VEEV    S  W+  F+WV V +++    R  ++V +S      CP  L
Subjt:  KALIILVSPMAEDWP-------------------ESM--------------VEEVSWADSSPWIGSFIWVCVCLDI---TRLSVEVLSS-----ICPMVL

Query:  WYGVLVSM---SAYLGHSIRE
         Y  L         +GHSIRE
Subjt:  WYGVLVSM---SAYLGHSIRE

A0A6J1DYG3 uncharacterized protein LOC1110246769.7e-1840Show/hide
Query:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE
        M+++   W +  L  +E     + +   +L+ E IQLC + K+ TS +I   A  S MK +W++H  TRIE+A  N++VI F+++++K RV++SGPW F+
Subjt:  MEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWHFE

Query:  KALIILVSPMAEDWP
        K+L +LVSP A D P
Subjt:  KALIILVSPMAEDWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGTGGATATCCCTTGAAAAACGATAGTCTTCTCAATCTTGTTCTCATATTTTGGAACTACGATCAGAATTATATACCATTGAGAAGGTTCAGTCATAATCTATT
GAACAATATACTCAAAGTCATTATTGATAAACTTGTTGTCGTTTCTGTGTCTTTGGATGATAAGGAGATCTTAATTTACACGTTTAATGGATTGCCTTTGGTGTTTAATT
CTTTCCATACATCTATTCGTACGTGCAGTGATAGTCTCACACTTGAAAATCTCCATGTCATGCTTGAGGTTGAGGAACAATCTCTGAATCAACATACTAAGGCTTCAGAA
CTTATTCCTACGGCTATGGTTGCTTATCGTGGTACTTCTACCTTTCAGGATGGAAATAATGGTGGTTCCTTAAATCATGGCCGAAATAATCGAGGCAACGATCGTGGTGA
TTTTCCTACCTCTGGTAAAGATCCTCGTCCTTCGACGCAACTTGCAGCGATGGCAGTAAATTTTATGACCCTTTATTCTTCCCAATCTAATGCTTTTTGGTTGTCTGATA
GTGGTTGCAACACTCATCTCACCAATGATTTGACAAATATTTCAGCCTTGCAAATACTTACAATGGAGAAGATGCTTGGTGTATTGTCTAAACTCGTAGTTTGTGATTAT
GGCGTTGGTTTCTTCTGGTGCTATTATGTTCCTTCTATGGAGGATTTAGTGCGTCGTTGGGCTAGTCTTGTGTTAATCGAGGATGAAGCCATTCCTGTGTCTATTGGGGA
TGTGAATATTTTGTTGTCGAATGAAACTATTCAATTGTGTGCCATGGCGAAAGTTTTCACTAGCCATAAGATCCATCTTGATGCCTTTCGATCGTTCATGAAAACTATTT
GGCGTGTGCACCATGATACTCGCATTGAATCTGCCCGTGACAATGTCTTTGTTATTCACTTCCGCTCCCTGATGAAGAAAAATCGGGTTATGAACTCGGGGCCCTGGCAT
TTTGAAAAAGCGTTAATTATTTTGGTATCCCCAATGGCAGAGGATTGGCCTGAGTCTATGGTGGAGGAGGTTTCTTGGGCGGATTCTTCCCCTTGGATTGGGTCGTTTAT
ATGGGTATGCGTTTGCTTGGATATCACTCGCCTCTCCGTCGAGGTGTTAAGCTCTATTTGTCCTATGGTATTGTGGTATGGTGTCCTTGTAAGTATGAGCGCCTACCTCG
GCCATTCCATTAGAGAGTGCGACGTACCAAGCGACGCTTCTATCTCAACGTCGGCTCCTTATGGCGATTGGCTCCGTGCGACTCCATTGGCCCGGGCTCCAATGCGGAGA
ATGGGGGTCCCAGCGGTCTATCTGCAGGTAATTTTGGTGCTTGGGGAAGGAGTGGGGATGATCGACGTGAGGCTCCTTTGTTCAGGTCCCTTCCTGCCATCTGAGGCGGA
GACGGTGGGTGGTGATGCTTCCTCGGTAGTGGGCGCCGGCGTGCATGTGACGGCGTCGACTAGTTCTGTTGTCTCTGGCGTGGAACGGGAGCTGGTCGTGCCGTCTTCTG
CGGCTACTGATTCCACGATTATGTTGACTGCGCACGACACGCATACACGATCTGATGGTTTAGTTTTGACTCCACCTATGCTTTTGGAGCTTGGGGATTCCTCTCAACCC
AAGGCCTCTTCTATTGGTCCTATTCTGTCAAATGAGTCGGCCTCAACTAAACACTGGAAACAACTTGCACGTGGAGCTATTATGGATATCCCATTTCAGGTGGGGCCACT
GGTCTTAGTGAGAAACGTGACTTCCCATTTGAGATCTCCTCCTCCCAGATTCTTGGGAAAAAACAAAAAGTGGGTTTTAAAGGCGGGGCGGTGGATCCTACTCTATCCTA
TGATGACTCTTCGACTTTATCTCCATCGGCGGAGGCTATTCTTCAGCCCCACCGAGAACCATGACGATCCTTTTTTGGAACGCCCGTGGTTTTTACGGCCACCCGACACT
GAATCAAAACATTTATCTTGGTCTCTCCTTCGGCATCTTCAAGCTAGCTCTGAGTCCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGTGGATATCCCTTGAAAAACGATAGTCTTCTCAATCTTGTTCTCATATTTTGGAACTACGATCAGAATTATATACCATTGAGAAGGTTCAGTCATAATCTATT
GAACAATATACTCAAAGTCATTATTGATAAACTTGTTGTCGTTTCTGTGTCTTTGGATGATAAGGAGATCTTAATTTACACGTTTAATGGATTGCCTTTGGTGTTTAATT
CTTTCCATACATCTATTCGTACGTGCAGTGATAGTCTCACACTTGAAAATCTCCATGTCATGCTTGAGGTTGAGGAACAATCTCTGAATCAACATACTAAGGCTTCAGAA
CTTATTCCTACGGCTATGGTTGCTTATCGTGGTACTTCTACCTTTCAGGATGGAAATAATGGTGGTTCCTTAAATCATGGCCGAAATAATCGAGGCAACGATCGTGGTGA
TTTTCCTACCTCTGGTAAAGATCCTCGTCCTTCGACGCAACTTGCAGCGATGGCAGTAAATTTTATGACCCTTTATTCTTCCCAATCTAATGCTTTTTGGTTGTCTGATA
GTGGTTGCAACACTCATCTCACCAATGATTTGACAAATATTTCAGCCTTGCAAATACTTACAATGGAGAAGATGCTTGGTGTATTGTCTAAACTCGTAGTTTGTGATTAT
GGCGTTGGTTTCTTCTGGTGCTATTATGTTCCTTCTATGGAGGATTTAGTGCGTCGTTGGGCTAGTCTTGTGTTAATCGAGGATGAAGCCATTCCTGTGTCTATTGGGGA
TGTGAATATTTTGTTGTCGAATGAAACTATTCAATTGTGTGCCATGGCGAAAGTTTTCACTAGCCATAAGATCCATCTTGATGCCTTTCGATCGTTCATGAAAACTATTT
GGCGTGTGCACCATGATACTCGCATTGAATCTGCCCGTGACAATGTCTTTGTTATTCACTTCCGCTCCCTGATGAAGAAAAATCGGGTTATGAACTCGGGGCCCTGGCAT
TTTGAAAAAGCGTTAATTATTTTGGTATCCCCAATGGCAGAGGATTGGCCTGAGTCTATGGTGGAGGAGGTTTCTTGGGCGGATTCTTCCCCTTGGATTGGGTCGTTTAT
ATGGGTATGCGTTTGCTTGGATATCACTCGCCTCTCCGTCGAGGTGTTAAGCTCTATTTGTCCTATGGTATTGTGGTATGGTGTCCTTGTAAGTATGAGCGCCTACCTCG
GCCATTCCATTAGAGAGTGCGACGTACCAAGCGACGCTTCTATCTCAACGTCGGCTCCTTATGGCGATTGGCTCCGTGCGACTCCATTGGCCCGGGCTCCAATGCGGAGA
ATGGGGGTCCCAGCGGTCTATCTGCAGGTAATTTTGGTGCTTGGGGAAGGAGTGGGGATGATCGACGTGAGGCTCCTTTGTTCAGGTCCCTTCCTGCCATCTGAGGCGGA
GACGGTGGGTGGTGATGCTTCCTCGGTAGTGGGCGCCGGCGTGCATGTGACGGCGTCGACTAGTTCTGTTGTCTCTGGCGTGGAACGGGAGCTGGTCGTGCCGTCTTCTG
CGGCTACTGATTCCACGATTATGTTGACTGCGCACGACACGCATACACGATCTGATGGTTTAGTTTTGACTCCACCTATGCTTTTGGAGCTTGGGGATTCCTCTCAACCC
AAGGCCTCTTCTATTGGTCCTATTCTGTCAAATGAGTCGGCCTCAACTAAACACTGGAAACAACTTGCACGTGGAGCTATTATGGATATCCCATTTCAGGTGGGGCCACT
GGTCTTAGTGAGAAACGTGACTTCCCATTTGAGATCTCCTCCTCCCAGATTCTTGGGAAAAAACAAAAAGTGGGTTTTAAAGGCGGGGCGGTGGATCCTACTCTATCCTA
TGATGACTCTTCGACTTTATCTCCATCGGCGGAGGCTATTCTTCAGCCCCACCGAGAACCATGACGATCCTTTTTTGGAACGCCCGTGGTTTTTACGGCCACCCGACACT
GAATCAAAACATTTATCTTGGTCTCTCCTTCGGCATCTTCAAGCTAGCTCTGAGTCCTCTTAG
Protein sequenceShow/hide protein sequence
MSCGYPLKNDSLLNLVLIFWNYDQNYIPLRRFSHNLLNNILKVIIDKLVVVSVSLDDKEILIYTFNGLPLVFNSFHTSIRTCSDSLTLENLHVMLEVEEQSLNQHTKASE
LIPTAMVAYRGTSTFQDGNNGGSLNHGRNNRGNDRGDFPTSGKDPRPSTQLAAMAVNFMTLYSSQSNAFWLSDSGCNTHLTNDLTNISALQILTMEKMLGVLSKLVVCDY
GVGFFWCYYVPSMEDLVRRWASLVLIEDEAIPVSIGDVNILLSNETIQLCAMAKVFTSHKIHLDAFRSFMKTIWRVHHDTRIESARDNVFVIHFRSLMKKNRVMNSGPWH
FEKALIILVSPMAEDWPESMVEEVSWADSSPWIGSFIWVCVCLDITRLSVEVLSSICPMVLWYGVLVSMSAYLGHSIRECDVPSDASISTSAPYGDWLRATPLARAPMRR
MGVPAVYLQVILVLGEGVGMIDVRLLCSGPFLPSEAETVGGDASSVVGAGVHVTASTSSVVSGVERELVVPSSAATDSTIMLTAHDTHTRSDGLVLTPPMLLELGDSSQP
KASSIGPILSNESASTKHWKQLARGAIMDIPFQVGPLVLVRNVTSHLRSPPPRFLGKNKKWVLKAGRWILLYPMMTLRLYLHRRRLFFSPTENHDDPFLERPWFLRPPDT
ESKHLSWSLLRHLQASSESS