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Moc08g16580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:12722019..12722911
RNA-Seq ExpressionMoc08g16580
SyntenyMoc08g16580
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.0e-3282.29Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKRKSISS KELAR FVTQF GG  RS+ V YLLTIKQKA ESLKDYVARFN+EKLQVEGLTDAV LL F+SGVKDE+LVFSFGK+T GTFSEA S
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]6.2e-3075Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LA+ FVTQF+GG+ RS+ V YLLTIKQ+A ESL DYVARFNEEKLQVEGLT+AV+L+AF+S ++DE L FSFGKKTP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]5.8e-3686.46Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS KELA  FVTQFVGG+++SK VTYLLTIKQKA ESLK+YVARFNEEKLQVEGLTDAVAL+AFVSGVKDERLVFSFGK+TPGTF EALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.6e-3279.17Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LAR FVTQFVGG+ RS+ V YLLTIKQ+  ESL+DYVARFNEEKLQVEGLTDAV+LLAF+SGV+DE L FSFGK+TP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]8.1e-3076.04Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LAR F+TQFVGG+ RS+ V YLLTIKQ+  ESL DYVARFNEEKLQ+EGLTDAV+LLAF+SGV+DE L FSF K+TP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166194.9e-3382.29Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKRKSISS KELAR FVTQF GG  RS+ V YLLTIKQKA ESLKDYVARFN+EKLQVEGLTDAV LL F+SGVKDE+LVFSFGK+T GTFSEA S
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
A0A6J1D7D2 uncharacterized protein LOC1110183073.0e-3075Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LA+ FVTQF+GG+ RS+ V YLLTIKQ+A ESL DYVARFNEEKLQVEGLT+AV+L+AF+S ++DE L FSFGKKTP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
A0A6J1DWY0 uncharacterized protein LOC1110252934.2e-3279.17Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LAR FVTQFVGG+ RS+ V YLLTIKQ+  ESL+DYVARFNEEKLQVEGLTDAV+LLAF+SGV+DE L FSFGK+TP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
A0A6J1DZ49 uncharacterized protein LOC1110248512.8e-3686.46Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS KELA  FVTQFVGG+++SK VTYLLTIKQKA ESLK+YVARFNEEKLQVEGLTDAVAL+AFVSGVKDERLVFSFGK+TPGTF EALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
A0A6J1E1E7 uncharacterized protein LOC1110255483.9e-3076.04Show/hide
Query:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
        LKR SISS K LAR F+TQFVGG+ RS+ V YLLTIKQ+  ESL DYVARFNEEKLQ+EGLTDAV+LLAF+SGV+DE L FSF K+TP TFSEALS
Subjt:  LKRKSISSIKELARTFVTQFVGGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTCCGGATCAACAGGGAGATAAGATGGCCGCCTTAGAAGATAAGGTAAAGGGAATACACCGGAGCATGTCCTTGCTTCTGCAAAAACTTGAGCAACATGAGGC
AGAACAACCAGCGCTTGCTCGCGATCCACGAAAGGATAAAGCCTCGATGATTGAAGGAATTAGGGAGACAACCAACTATGCATGGATCAAGCTGAAGATAGGAGGAAACG
ACAAACCCCGAACCAACATCCTCAGCCGGTTGGGGCGGCAAGTAGATTTGAAAAGAAAGTCGATCTCAAGCATCAAGGAATTGGCGAGGACATTTGTTACCCAATTCGTC
GGAGGACAGATTAGAAGCAAACAGGTAACATACCTACTGACTATCAAGCAAAAGGCGATAGAAAGCCTCAAAGACTATGTGGCTCGGTTCAATGAAGAGAAGCTACAAGT
GGAGGGTCTGACAGATGCAGTGGCACTACTAGCCTTTGTATCCGGTGTGAAAGATGAACGATTAGTATTCTCTTTTGGGAAGAAGACTCCAGGCACTTTCTCGGAGGCTT
TAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTCCGGATCAACAGGGAGATAAGATGGCCGCCTTAGAAGATAAGGTAAAGGGAATACACCGGAGCATGTCCTTGCTTCTGCAAAAACTTGAGCAACATGAGGC
AGAACAACCAGCGCTTGCTCGCGATCCACGAAAGGATAAAGCCTCGATGATTGAAGGAATTAGGGAGACAACCAACTATGCATGGATCAAGCTGAAGATAGGAGGAAACG
ACAAACCCCGAACCAACATCCTCAGCCGGTTGGGGCGGCAAGTAGATTTGAAAAGAAAGTCGATCTCAAGCATCAAGGAATTGGCGAGGACATTTGTTACCCAATTCGTC
GGAGGACAGATTAGAAGCAAACAGGTAACATACCTACTGACTATCAAGCAAAAGGCGATAGAAAGCCTCAAAGACTATGTGGCTCGGTTCAATGAAGAGAAGCTACAAGT
GGAGGGTCTGACAGATGCAGTGGCACTACTAGCCTTTGTATCCGGTGTGAAAGATGAACGATTAGTATTCTCTTTTGGGAAGAAGACTCCAGGCACTTTCTCGGAGGCTT
TAAGCTGA
Protein sequenceShow/hide protein sequence
MEGPDQQGDKMAALEDKVKGIHRSMSLLLQKLEQHEAEQPALARDPRKDKASMIEGIRETTNYAWIKLKIGGNDKPRTNILSRLGRQVDLKRKSISSIKELARTFVTQFV
GGQIRSKQVTYLLTIKQKAIESLKDYVARFNEEKLQVEGLTDAVALLAFVSGVKDERLVFSFGKKTPGTFSEALS