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Moc08g16730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag-pro-like protein
Genome locationchr8:12851965..12852489
RNA-Seq ExpressionMoc08g16730
SyntenyMoc08g16730
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.6e-4865.45Show/hide
Query:  GGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD-----------------------------------
        GGLP KTDPVGQ+APSNEKFEVL+ERLRA+EGT VFGNIDASQLCLVS LV+PPKF VPEFEKYD                                   
Subjt:  GGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD-----------------------------------

Query:  ----------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                  D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKSTESFKEYAQRWRDTAA
Subjt:  ----------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.2e-4863.22Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP VLNLG L  KTDPVGQ+APSNEKFEVL+ERLRA+E T VFGNIDASQLC VSGLV+PPK  VPEFEKY+                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKST+SFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]2.6e-4357.47Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        ++PP VLNLGG     DP  Q APS+EK EVLEERLRAVEGT VFGNIDASQLCL SGLV+PPKF +PEFEKY+                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+ HV SWKNLADSFLKQYKHNIDM  D LDLQ MEKK+ ESFKEY QRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]2.4e-4963.79Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP V NLGG P KTDPV Q+A S EK EVLEERLRA+EGT VFGNIDASQLCLVSGLV+PPKF VPEFEKYD                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEK STESFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]1.2e-5367.24Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP VLNLGGLP KTD VGQ+APSNEKFEVLEERLRA+EGTYVFGNIDASQLCLVSGLV+PPKF VPEFEKYD                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+S+V SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKSTESFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H7.6e-4965.45Show/hide
Query:  GGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD-----------------------------------
        GGLP KTDPVGQ+APSNEKFEVL+ERLRA+EGT VFGNIDASQLCLVS LV+PPKF VPEFEKYD                                   
Subjt:  GGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD-----------------------------------

Query:  ----------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                  D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKSTESFKEYAQRWRDTAA
Subjt:  ----------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

A0A6J1D099 Ribonuclease H5.8e-4963.22Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP VLNLG L  KTDPVGQ+APSNEKFEVL+ERLRA+E T VFGNIDASQLC VSGLV+PPK  VPEFEKY+                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKST+SFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222317.4e-4458.05Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        ++PP VLNLGG     DP  Q APS+EK EVLEERLRAVEGT VFGNIDASQLCL SGLV+PPKF +PEFEKYD                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+ HV SWKNLADSFLKQYKHNIDM  D LDLQ MEKK+ ESFKEY QRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

A0A6J1DZ90 Ribonuclease H1.2e-4963.79Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP V NLGG P KTDPV Q+A S EK EVLEERLRA+EGT VFGNIDASQLCLVSGLV+PPKF VPEFEKYD                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+SHV SWKNLADSFLKQYKHNIDMAPD LDLQ MEK STESFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

A0A6J1E2J7 Ribonuclease H6.0e-5467.24Show/hide
Query:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------
        MSPP VLNLGGLP KTD VGQ+APSNEKFEVLEERLRA+EGTYVFGNIDASQLCLVSGLV+PPKF VPEFEKYD                          
Subjt:  MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYD--------------------------

Query:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA
                           D+S+V SWKNLADSFLKQYKHNIDMAPD LDLQ MEKKSTESFKEYAQRWRDTAA
Subjt:  -------------------DNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIMEKKSTESFKEYAQRWRDTAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCCCCTATAGTCCTTAATCTTGGTGGTCTCCCAGTCAAGACAGACCCAGTCGGACAAAGTGCCCCCAGTAATGAGAAGTTTGAAGTTCTAGAGGAAAGGTTAAG
AGCAGTAGAGGGGACATATGTTTTTGGCAATATTGATGCCTCTCAATTGTGTTTGGTCTCTGGATTAGTCCTCCCTCCAAAATTTAACGTACCAGAATTCGAGAAATATG
ATGATAACTCGCATGTCGATTCATGGAAGAATCTAGCTGATTCTTTCCTAAAGCAATATAAGCATAACATAGATATGGCTCCAGACTGTTTAGATTTACAAATAATGGAG
AAGAAGAGTACAGAAAGCTTTAAGGAATACGCCCAAAGATGGAGGGACACGGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCCCCTATAGTCCTTAATCTTGGTGGTCTCCCAGTCAAGACAGACCCAGTCGGACAAAGTGCCCCCAGTAATGAGAAGTTTGAAGTTCTAGAGGAAAGGTTAAG
AGCAGTAGAGGGGACATATGTTTTTGGCAATATTGATGCCTCTCAATTGTGTTTGGTCTCTGGATTAGTCCTCCCTCCAAAATTTAACGTACCAGAATTCGAGAAATATG
ATGATAACTCGCATGTCGATTCATGGAAGAATCTAGCTGATTCTTTCCTAAAGCAATATAAGCATAACATAGATATGGCTCCAGACTGTTTAGATTTACAAATAATGGAG
AAGAAGAGTACAGAAAGCTTTAAGGAATACGCCCAAAGATGGAGGGACACGGCAGCTTAG
Protein sequenceShow/hide protein sequence
MSPPIVLNLGGLPVKTDPVGQSAPSNEKFEVLEERLRAVEGTYVFGNIDASQLCLVSGLVLPPKFNVPEFEKYDDNSHVDSWKNLADSFLKQYKHNIDMAPDCLDLQIME
KKSTESFKEYAQRWRDTAA