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Moc08g16800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022231
Genome locationchr8:12890848..12892005
RNA-Seq ExpressionMoc08g16800
SyntenyMoc08g16800
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]5.6e-2585.53Show/hide
Query:  EIARSSVPHRTYRTRCRARIIMEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYP
        +IARS  PHRTYRTR RAR++MED+KAEQEKTRKDIEELREKLDVILLALEKGK+ AD AT SNPVHEPQETPPYP
Subjt:  EIARSSVPHRTYRTRCRARIIMEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYP
XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]1.2e-3078.72Show/hide
Query:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        M+D+KAEQEK RKDIEELREKLDVILLALEKGKT AD  T SNPVH+ QE PPYP GYDP LR VAEGFM Q TTYNPLYD+ +GQY P FVKG
Subjt:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]3.7e-2464Show/hide
Query:  EDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYD-------PHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        +D+K+EQEKTRKDIEELREKLD ILLALEKGKT A+    SNP+HEP  TP +PPG++       P  RP+ EGFM QYTTYNPLYD+P GQ+ P  V+G
Subjt:  EDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYD-------PHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.9e-3685.11Show/hide
Query:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        MED+KAEQEKTRKDIEELREKLD I L LEKGK TAD AT SNP+HEPQETPPYPPGY P LRPVAEGFMPQYTTYNPLYDVP+GQY  +FVKG
Subjt:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
TrEMBL top hitse value%identityAlignment
A0A6J1CZG4 uncharacterized protein LOC1110162012.7e-2585.53Show/hide
Query:  EIARSSVPHRTYRTRCRARIIMEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYP
        +IARS  PHRTYRTR RAR++MED+KAEQEKTRKDIEELREKLDVILLALEKGK+ AD AT SNPVHEPQETPPYP
Subjt:  EIARSSVPHRTYRTRCRARIIMEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYP
A0A6J1D7T3 uncharacterized protein LOC1110178125.7e-3178.72Show/hide
Query:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        M+D+KAEQEK RKDIEELREKLDVILLALEKGKT AD  T SNPVH+ QE PPYP GYDP LR VAEGFM Q TTYNPLYD+ +GQY P FVKG
Subjt:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222311.8e-2464Show/hide
Query:  EDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYD-------PHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        +D+K+EQEKTRKDIEELREKLD ILLALEKGKT A+    SNP+HEP  TP +PPG++       P  RP+ EGFM QYTTYNPLYD+P GQ+ P  V+G
Subjt:  EDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYD-------PHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
A0A6J1DZ90 Ribonuclease H9.1e-3785.11Show/hide
Query:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
        MED+KAEQEKTRKDIEELREKLD I L LEKGK TAD AT SNP+HEPQETPPYPPGY P LRPVAEGFMPQYTTYNPLYDVP+GQY  +FVKG
Subjt:  MEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQYQPSFVKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAGAATTGCAACAAGCAAGAAGGGAGGCTGATGACCAAGGGAAAGAAAACAGACCGTTGGAAGTAGAGGCTTGGGACCTTAACAGAAGAATGTATCGAGTAAG
AAGGGAATTAGAGAGTTCACAGGCAGCCTTAAGGGCGCGAGACAATCAAATATCACAACAAGAAGCTGAAATTGCTTCTTTACACATAGAAATCATGTCCCTTCATGAAA
AGGCCACTGTGTTGGAGGAGAAAGAAAATGCCACTGATCGGTTAATGCAGGATTATGCCCAACATGTGCTCACCCAAGTCAGATGGGCAGCTCGAAGCGCAGATGGTTTA
GCTGAAGAGATAGCTCGCTCATCGGTACCACATCGCACTTACCGTACTAGATGCAGGGCGAGAATTATAATGGAAGATAAAAAAGCTGAGCAGGAGAAAACAAGGAAAGA
TATTGAAGAGTTGCGTGAAAAGTTAGATGTCATCCTTCTCGCATTGGAAAAAGGCAAGACGACTGCGGATCTTGCTACATTTAGCAACCCCGTCCATGAGCCTCAAGAAA
CCCCGCCTTATCCACCTGGGTACGATCCACATCTTAGACCAGTAGCAGAGGGTTTCATGCCACAATATACAACGTACAATCCTCTGTATGACGTTCCGCTTGGTCAGTAT
CAACCTTCCTTTGTAAAAGGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTAGAATTGCAACAAGCAAGAAGGGAGGCTGATGACCAAGGGAAAGAAAACAGACCGTTGGAAGTAGAGGCTTGGGACCTTAACAGAAGAATGTATCGAGTAAG
AAGGGAATTAGAGAGTTCACAGGCAGCCTTAAGGGCGCGAGACAATCAAATATCACAACAAGAAGCTGAAATTGCTTCTTTACACATAGAAATCATGTCCCTTCATGAAA
AGGCCACTGTGTTGGAGGAGAAAGAAAATGCCACTGATCGGTTAATGCAGGATTATGCCCAACATGTGCTCACCCAAGTCAGATGGGCAGCTCGAAGCGCAGATGGTTTA
GCTGAAGAGATAGCTCGCTCATCGGTACCACATCGCACTTACCGTACTAGATGCAGGGCGAGAATTATAATGGAAGATAAAAAAGCTGAGCAGGAGAAAACAAGGAAAGA
TATTGAAGAGTTGCGTGAAAAGTTAGATGTCATCCTTCTCGCATTGGAAAAAGGCAAGACGACTGCGGATCTTGCTACATTTAGCAACCCCGTCCATGAGCCTCAAGAAA
CCCCGCCTTATCCACCTGGGTACGATCCACATCTTAGACCAGTAGCAGAGGGTTTCATGCCACAATATACAACGTACAATCCTCTGTATGACGTTCCGCTTGGTCAGTAT
CAACCTTCCTTTGTAAAAGGAGTTTAA
Protein sequenceShow/hide protein sequence
MELELQQARREADDQGKENRPLEVEAWDLNRRMYRVRRELESSQAALRARDNQISQQEAEIASLHIEIMSLHEKATVLEEKENATDRLMQDYAQHVLTQVRWAARSADGL
AEEIARSSVPHRTYRTRCRARIIMEDKKAEQEKTRKDIEELREKLDVILLALEKGKTTADLATFSNPVHEPQETPPYPPGYDPHLRPVAEGFMPQYTTYNPLYDVPLGQY
QPSFVKGV