| GenBank top hits | e value | %identity | Alignment |
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| KAA0043826.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 2.2e-38 | 55.78 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KCIF+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| RZB51639.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 4.5e-39 | 58.78 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
ML + GLPKTFWGEA NT TY+IN+ PS+AL FKTP E W+G+PP +K FG LAFAH+KQG L+ RA KC+F+GYP+GVKGYKLW LE GE +CII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW------KEITTKSDLPQHE
DVTFDE M +E+ T+ DL ++
Subjt: IDVTFDEDSMPW------KEITTKSDLPQHE
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| RZB65843.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 5.0e-38 | 58.33 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
ML + GLPK FWGEA NT Y+INR PS+AL FKTP E W+G+PP +K FG LAFAH+KQG L RA KC+F+GYP+GVKGYKLW LE E +CII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIE
DVTFDE M KE + ++ NFE+E
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIE
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 5.0e-38 | 55.1 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KC+F+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 5.0e-38 | 55.1 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KC+F+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A445FRZ0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-39 | 58.78 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
ML + GLPKTFWGEA NT TY+IN+ PS+AL FKTP E W+G+PP +K FG LAFAH+KQG L+ RA KC+F+GYP+GVKGYKLW LE GE +CII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW------KEITTKSDLPQHE
DVTFDE M +E+ T+ DL ++
Subjt: IDVTFDEDSMPW------KEITTKSDLPQHE
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| A0A5A7TP18 Putative gag-pol polyprotein | 1.1e-38 | 55.78 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KCIF+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 2.4e-38 | 55.1 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KC+F+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| A0A5D3DNU1 Putative gag-pol polyprotein | 2.4e-38 | 55.1 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
+L+N LP FWGEA TA Y+INRSPSTAL+ KTPQE+WTGK P L+H++ FGC A+AH+K G L RA KC+F+GYP GVKGYKLW +E G NKCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
DVTF+E MP+ KE K H E+ + + P D N P
Subjt: IDVTFDEDSMPW--KEITTKSDLPQHENFEIELQT---PENDTKNGP
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| A0A803P579 Uncharacterized protein | 6.3e-39 | 56.93 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
ML GL K FWGEA+ TA+Y+INR PSTAL FKTPQE WTG P ++H+K FGC AFAH +Q LEPRA KC+FLGYP+GVKGYKLW LE G KCII+
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKCIIN
Query: IDVTFDEDSMPWKEITTKSDLPQHENFEIELQTPEND
DV F E M K + E +E+Q D
Subjt: IDVTFDEDSMPWKEITTKSDLPQHENFEIELQTPEND
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.3e-20 | 46.49 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTAL--SFKTPQELWTGKPPKLDHMKTFGCLAFAHL--KQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENK
M+S L K+FWGEAV TATY+INR PS AL S KTP E+W K P L H++ FG + H+ KQG + ++ K IF+GY G+KLW ++ K
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTAL--SFKTPQELWTGKPPKLDHMKTFGCLAFAHL--KQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENK
Query: CIINIDVTFDEDSM
I+ DV DE +M
Subjt: CIINIDVTFDEDSM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-22 | 40.79 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHL---KQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
ML LPK+FWGEAV TA Y+INRSPS L+F+ P+ +WT K H+K FGC AFAH+ ++ L+ ++ CIF+GY D GY+LW + + K
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHL---KQGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
Query: IINIDVTFDEDSMPWKEITTKSDLPQH-ENFEIELQTPENDTKNGPDSNINT
I + DV F E E+ T +D+ + +N I T N P S +T
Subjt: IINIDVTFDEDSMPWKEITTKSDLPQH-ENFEIELQTPENDTKNGPDSNINT
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 7.3e-16 | 50 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKK
ML GLPKTF +A NTA +IIN+ PSTA++F P E+W P +++ FGC+A+ H +G L+PRAKK
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLKQGTLEPRAKK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.4e-13 | 32.17 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLK---QGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
+LS+ +PKT+W A A Y+INR P+ L ++P + G P D ++ FGC + L+ Q L+ ++++C+FLGY Y L++ ++
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLK---QGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
Query: IINIDVTFDEDSMPW
I+ V FDE+ P+
Subjt: IINIDVTFDEDSMPW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-12 | 28.37 | Show/hide |
Query: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLK---QGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
+LS+ +PKT+W A + A Y+INR P+ L ++P + G+PP + +K FGC + L+ + LE ++K+C F+GY Y + +G +
Subjt: MLSNFGLPKTFWGEAVNTATYIINRSPSTALSFKTPQELWTGKPPKLDHMKTFGCLAFAHLK---QGTLEPRAKKCIFLGYPDGVKGYKLWSLESGENKC
Query: IINIDVTFDEDSMPWKEITTKSDLPQHENFEIELQTPENDT
+ V FDE P+ Q + + P + T
Subjt: IINIDVTFDEDSMPWKEITTKSDLPQHENFEIELQTPENDT
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