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Moc08g16930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g16930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr8:12939136..12939699
RNA-Seq ExpressionMoc08g16930
SyntenyMoc08g16930
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050070.1 putative polyprotein [Cucumis melo var. makuwa]6.4e-5157.07Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+T+S ++LYL+D VLR V ++  + ELW KLE LYM +SL+NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SKGLEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS  + I+LD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]7.1e-5056.52Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+ +S ++LYL+D VLR V ++    ELW KLE LY+++SL NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SK LEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS T+ IVLD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

TXG49237.1 hypothetical protein EZV62_025112 [Acer yangbiense]5.4e-5056.15Show/hide
Query:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI
        MS   +IDKFD  GDF +WR K++ALL QQK+ KA++ P K P S+  EQK DMLE+    +IL L+DNVLR ++D K   ++W KLE LY+++SLTNKI
Subjt:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI

Query:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        YLKERLF +KMD+SKGL +NLD+F K+ ++L NAG  E LS EN+A+I+LNSL + +K+VKAAIKYG  S +L+  + +L+SKELE+
Subjt:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

TXG64595.1 hypothetical protein EZV62_011589 [Acer yangbiense]5.4e-5056.15Show/hide
Query:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI
        MS   +IDKFD  GDF +WR K++ALL QQK+ KA++ P K P S+  EQK DMLE+    +IL L+DNVLR ++D K   ++W KLE LY+++SLTNKI
Subjt:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI

Query:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        YLKERLF +KMD+SKGL +NLD+F K+ ++L NAG  E LS EN+A+I+LNSL + +K+VKAAIKYG  S +L+  + +L+SKELE+
Subjt:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]5.4e-5056.52Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+ +S ++LYL+D VLR V ++    ELW KLE LY+++SL NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SK LEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS T+ IVLD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

TrEMBL top hitse value%identityAlignment
A0A5A7U459 Putative polyprotein3.1e-5157.07Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+T+S ++LYL+D VLR V ++  + ELW KLE LYM +SL+NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SKGLEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS  + I+LD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

A0A5A7UB25 Putative gag-pol polyprotein3.4e-5056.52Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+ +S ++LYL+D VLR V ++    ELW KLE LY+++SL NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SK LEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS T+ IVLD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

A0A5C7GXL9 Sucrose-phosphate phosphatase2.6e-5056.15Show/hide
Query:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI
        MS   +IDKFD  GDF +WR K++ALL QQK+ KA++ P K P S+  EQK DMLE+    +IL L+DNVLR ++D K   ++W KLE LY+++SLTNKI
Subjt:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI

Query:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        YLKERLF +KMD+SKGL +NLD+F K+ ++L NAG  E LS EN+A+I+LNSL + +K+VKAAIKYG  S +L+  + +L+SKELE+
Subjt:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

A0A5C7I661 Uncharacterized protein2.6e-5056.15Show/hide
Query:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI
        MS   +IDKFD  GDF +WR K++ALL QQK+ KA++ P K P S+  EQK DMLE+    +IL L+DNVLR ++D K   ++W KLE LY+++SLTNKI
Subjt:  MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKI

Query:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        YLKERLF +KMD+SKGL +NLD+F K+ ++L NAG  E LS EN+A+I+LNSL + +K+VKAAIKYG  S +L+  + +L+SKELE+
Subjt:  YLKERLFSYKMDSSKGLEENLDEFNKVCMKLINAG--ETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

A0A5D3DNU1 Putative gag-pol polyprotein2.6e-5056.52Show/hide
Query:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY
        S   E+ KF+  GDF LWR K+RA+L+Q KV K LD+  + P ++ E +K DM E+ +S ++LYL+D VLR V ++    ELW KLE LY+++SL NKIY
Subjt:  SAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIY

Query:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI
        +KE+ F YKMD SK LEENLDEF K+ + L N GE +S ENQAVI+LNSL E Y+EVKAAIKYG DS T+ IVLD+L+++ LEI
Subjt:  LKERLFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEI

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-2536.16Show/hide
Query:  EIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIYLKER
        E+ KF+    F  W+ +MR LLIQQ + K LD  SK P +M  E   D+ E   S + L+L+D+V+  + D      +WT+LE LYMS++LTNK+YLK++
Subjt:  EIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIYLKER

Query:  LFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKE
        L++  M        +L+ FN +  +L N G  +  E++A+++LNSL   Y  +   I +G  +  L  V  +L   E
Subjt:  LFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCAATAATAGAAATTGACAAATTTGACGACAGAGGTGATTTTTGTTTGTGGCGAACAAAAATGCGGGCACTTCTGATACAACAGAAAGTGGGAAAAGCT
CTGGACGATCCAAGTAAGTGGCCCTCATCCATGATTGAAGAACAAAAACCTGATATGTTAGAAATTACACATAGTATTGTGATTTTATATCTTGCTGACAATGTT
TTGAGGCGTGTGAGTGATTCAAAAAATGTTTCTGAACTCTGGACCAAACTTGAAAAACTTTATATGTCCAGATCACTCACCAACAAGATATACCTCAAAGAAAGA
TTGTTCAGTTACAAGATGGATTCTTCCAAGGGGCTTGAGGAAAATCTAGATGAATTCAATAAAGTTTGTATGAAATTGATTAATGCTGGTGAAACATTAAGTGCT
GAAAACCAAGCTGTGATCATTCTAAATTCACTTCTAGAGAAATACAAAGAGGTTAAAGCAGCAATTAAGTATGGTATAGATTCCTTCACTTTAGATATTGTGTTG
GATTCTCTTCGTTCAAAAGAATTAGAGATTATTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCAATAATAGAAATTGACAAATTTGACGACAGAGGTGATTTTTGTTTGTGGCGAACAAAAATGCGGGCACTTCTGATACAACAGAAAGTGGGAAAAGCT
CTGGACGATCCAAGTAAGTGGCCCTCATCCATGATTGAAGAACAAAAACCTGATATGTTAGAAATTACACATAGTATTGTGATTTTATATCTTGCTGACAATGTT
TTGAGGCGTGTGAGTGATTCAAAAAATGTTTCTGAACTCTGGACCAAACTTGAAAAACTTTATATGTCCAGATCACTCACCAACAAGATATACCTCAAAGAAAGA
TTGTTCAGTTACAAGATGGATTCTTCCAAGGGGCTTGAGGAAAATCTAGATGAATTCAATAAAGTTTGTATGAAATTGATTAATGCTGGTGAAACATTAAGTGCT
GAAAACCAAGCTGTGATCATTCTAAATTCACTTCTAGAGAAATACAAAGAGGTTAAAGCAGCAATTAAGTATGGTATAGATTCCTTCACTTTAGATATTGTGTTG
GATTCTCTTCGTTCAAAAGAATTAGAGATTATTGCATAG
Protein sequenceShow/hide protein sequence
MSAIIEIDKFDDRGDFCLWRTKMRALLIQQKVGKALDDPSKWPSSMIEEQKPDMLEITHSIVILYLADNVLRRVSDSKNVSELWTKLEKLYMSRSLTNKIYLKER
LFSYKMDSSKGLEENLDEFNKVCMKLINAGETLSAENQAVIILNSLLEKYKEVKAAIKYGIDSFTLDIVLDSLRSKELEIIA