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Moc08g17080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g17080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr8:13030464..13036334
RNA-Seq ExpressionMoc08g17080
SyntenyMoc08g17080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020255452.1 uncharacterized protein LOC109832512 [Asparagus officinalis]8.1e-0625.1Show/hide
Query:  MNSENETSTSHMAG--ICLPKQFNVPSWISWIVDFGASAHICFSRYSFTSLL---------------------------------QDKFTLKTIDKGRLH
        M + +  ST+ ++G   CL      PS I W++D GA+ HI  S+  FTSL                                   D  + KTI +G+LH
Subjt:  MNSENETSTSHMAG--ICLPKQFNVPSWISWIVDFGASAHICFSRYSFTSLL---------------------------------QDKFTLKTIDKGRLH

Query:  KGLYLLDSSYLDYISPVD-SKLNLDINMEPHTPPIIPLNDNCVDKLMELDEQPTVDVQNFEDRTAIIPPSTPIDTIVETTTPIDAIEDTMSASTMYDSLC
         GLY+LDS+ ++ +S +   KL+  + +              +D       QP +D  + +        +TP   +V    P   + + +          
Subjt:  KGLYLLDSSYLDYISPVD-SKLNLDINMEPHTPPIIPLNDNCVDKLMELDEQPTVDVQNFEDRTAIIPPSTPIDTIVETTTPIDAIEDTMSASTMYDSLC

Query:  EKSDVIVPHRSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSHRIY
            V +P RS R ++PP YL DF  S++  +     S+ HP+  Y+ Y   S +HR Y
Subjt:  EKSDVIVPHRSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSHRIY

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]1.5e-1547.12Show/hide
Query:  VSYLSFSDSHRIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALEC
        V  L  +    + P+ LE DS RIFNLF Q +ED+SE GEIV+  +         SF F +REGN+A H + RRA LLRE  IW+E WP E  S   +EC
Subjt:  VSYLSFSDSHRIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALEC

Query:  LDTL
        L+ L
Subjt:  LDTL

XP_022143573.1 uncharacterized protein LOC111013441 [Momordica charantia]1.0e-0827.94Show/hide
Query:  TSLLQDKFTLKTIDKGRLHKGLYLLDSS------------------------------------YLDYISPVDS-----------------KLNLDINME
        T ++QDK   KTIDKGRL  GLYLLD++                                     L  + PVD+                     D+++ 
Subjt:  TSLLQDKFTLKTIDKGRLHKGLYLLDSS------------------------------------YLDYISPVDS-----------------KLNLDINME

Query:  PHTPPIIPLNDNCVDKLMELDEQPTVDVQNFE-DRTAIIP-----PSTPIDTIVETTTP-IDAIEDTMSASTMYDSLCEKSDV-------------IVPH
        P    ++P   N +D  +++     +D+ N + D  A++P     P+ PI+     T P  D    T   S    +                    IVP 
Subjt:  PHTPPIIPLNDNCVDKLMELDEQPTVDVQNFE-DRTAIIP-----PSTPIDTIVETTTP-IDAIEDTMSASTMYDSLCEKSDV-------------IVPH

Query:  RSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSH
        RS+R ++ PSYL DFHCSL++ S    AS+RHPLQ+Y+SY   S +H
Subjt:  RSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSH

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.1e-0847.22Show/hide
Query:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        ED+SE GEIV+  +         SF F +REGN+A H + RRA LL E  IW+E WP E  S   +ECL+ L
Subjt:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.4e-0541.86Show/hide
Query:  QLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC
        Q+E DS RIFNL      D SEVG +  +++  L   A   SF FT R GN   H + + AL      IW+E WP E  SV A++C
Subjt:  QLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC

TrEMBL top hitse value%identityAlignment
A0A5J5AMM8 Uncharacterized protein2.5e-0528.57Show/hide
Query:  LLQDKFTLKTIDKGRLHKGLYLLDSSYLDYISPVDSKLNLDINMEPHTPPIIPLNDNCVDKLME---LDEQPTVDVQNFEDRTAIIPPSTPIDTIVETTT
        ++Q+  + KTI KG   + LY+LD++ L   S   + +N       H    +  ++N +D ++    LD  P +           + PS+ +    E   
Subjt:  LLQDKFTLKTIDKGRLHKGLYLLDSSYLDYISPVDSKLNLDINMEPHTPPIIPLNDNCVDKLME---LDEQPTVDVQNFEDRTAIIPPSTPIDTIVETTT

Query:  PIDAIEDTMSASTMYDSLCEKSDVIVPHRSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSHRIYPIQL
         +D ++D   A          S VI   +S+R  +PPSYL D+HCSL+S   +P ++S +PL +++SY S S SHR + + +
Subjt:  PIDAIEDTMSASTMYDSLCEKSDVIVPHRSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSHRIYPIQL

A0A6J1CIF1 uncharacterized protein LOC1110112377.1e-1647.12Show/hide
Query:  VSYLSFSDSHRIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALEC
        V  L  +    + P+ LE DS RIFNLF Q +ED+SE GEIV+  +         SF F +REGN+A H + RRA LLRE  IW+E WP E  S   +EC
Subjt:  VSYLSFSDSHRIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALEC

Query:  LDTL
        L+ L
Subjt:  LDTL

A0A6J1CR17 uncharacterized protein LOC1110134414.9e-0927.94Show/hide
Query:  TSLLQDKFTLKTIDKGRLHKGLYLLDSS------------------------------------YLDYISPVDS-----------------KLNLDINME
        T ++QDK   KTIDKGRL  GLYLLD++                                     L  + PVD+                     D+++ 
Subjt:  TSLLQDKFTLKTIDKGRLHKGLYLLDSS------------------------------------YLDYISPVDS-----------------KLNLDINME

Query:  PHTPPIIPLNDNCVDKLMELDEQPTVDVQNFE-DRTAIIP-----PSTPIDTIVETTTP-IDAIEDTMSASTMYDSLCEKSDV-------------IVPH
        P    ++P   N +D  +++     +D+ N + D  A++P     P+ PI+     T P  D    T   S    +                    IVP 
Subjt:  PHTPPIIPLNDNCVDKLMELDEQPTVDVQNFE-DRTAIIP-----PSTPIDTIVETTTP-IDAIEDTMSASTMYDSLCEKSDV-------------IVPH

Query:  RSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSH
        RS+R ++ PSYL DFHCSL++ S    AS+RHPLQ+Y+SY   S +H
Subjt:  RSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSH

A0A6J1DAR4 uncharacterized protein LOC1110189542.5e-0847.22Show/hide
Query:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL
        ED+SE GEIV+  +         SF F +REGN+A H + RRA LL E  IW+E WP E  S   +ECL+ L
Subjt:  EDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRA-LLRESHIWLEGWPTEFHSVFALECLDTL

A0A6J1DBJ7 uncharacterized protein LOC1110189736.7e-0641.86Show/hide
Query:  QLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC
        Q+E DS RIFNL      D SEVG +  +++  L   A   SF FT R GN   H + + AL      IW+E WP E  SV A++C
Subjt:  QLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKA-LGSFLFTRREGNEATHGMVRRALLR-ESHIWLEGWPTEFHSVFALEC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGAAAATGAAACATCGACTTCTCATATGGCAGGTATTTGTCTACCTAAACAATTCAATGTTCCTTCATGGATTTCTTGGATAGTGGATTTCGGGGCTTCTGC
ACATATATGCTTTTCTCGGTATTCATTTACTTCATTACTACAGGACAAGTTCACTTTGAAGACGATTGACAAAGGTAGATTACACAAAGGACTTTATTTGCTTGATTCAT
CATATTTGGATTACATCTCCCCCGTGGATTCAAAATTGAATCTTGACATCAACATGGAACCTCATACTCCACCTATAATTCCATTGAACGATAATTGTGTTGACAAACTA
ATGGAACTTGATGAGCAACCTACTGTTGATGTCCAAAATTTTGAAGACAGGACTGCTATTATTCCGCCTTCAACACCAATTGACACCATTGTCGAGACCACCACCCCAAT
TGATGCAATTGAGGATACGATGTCTGCATCCACTATGTATGATTCTTTGTGTGAGAAAAGTGATGTCATTGTCCCTCATCGCTCCTCACGCACTGCACAACCGCCTTCTT
ACTTGTGGGATTTCCATTGTAGCCTTATCAGTAGGTCGGATATTCCTACAGCATCATCTCGGCACCCTCTACAAAGATATGTTTCTTATCTATCTTTTTCAGATTCTCAT
CGTATCTACCCGATTCAATTGGAATTAGATTCTTGGCGCATCTTCAACCTGTTCCGACAGCAAACGGAGGATGTTTCAGAGGTGGGAGAAATTGTGGTGATGGTGAGAGG
GCTTCTACCTGTTAAAGCGTTGGGCTCGTTCCTGTTCACCAGAAGAGAGGGGAACGAAGCCACACACGGTATGGTGAGGAGAGCTCTTCTTCGAGAAAGCCATATCTGGT
TGGAGGGATGGCCGACGGAATTCCATTCTGTTTTTGCTTTGGAATGTTTGGATACTCTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGAAAATGAAACATCGACTTCTCATATGGCAGGTATTTGTCTACCTAAACAATTCAATGTTCCTTCATGGATTTCTTGGATAGTGGATTTCGGGGCTTCTGC
ACATATATGCTTTTCTCGGTATTCATTTACTTCATTACTACAGGACAAGTTCACTTTGAAGACGATTGACAAAGGTAGATTACACAAAGGACTTTATTTGCTTGATTCAT
CATATTTGGATTACATCTCCCCCGTGGATTCAAAATTGAATCTTGACATCAACATGGAACCTCATACTCCACCTATAATTCCATTGAACGATAATTGTGTTGACAAACTA
ATGGAACTTGATGAGCAACCTACTGTTGATGTCCAAAATTTTGAAGACAGGACTGCTATTATTCCGCCTTCAACACCAATTGACACCATTGTCGAGACCACCACCCCAAT
TGATGCAATTGAGGATACGATGTCTGCATCCACTATGTATGATTCTTTGTGTGAGAAAAGTGATGTCATTGTCCCTCATCGCTCCTCACGCACTGCACAACCGCCTTCTT
ACTTGTGGGATTTCCATTGTAGCCTTATCAGTAGGTCGGATATTCCTACAGCATCATCTCGGCACCCTCTACAAAGATATGTTTCTTATCTATCTTTTTCAGATTCTCAT
CGTATCTACCCGATTCAATTGGAATTAGATTCTTGGCGCATCTTCAACCTGTTCCGACAGCAAACGGAGGATGTTTCAGAGGTGGGAGAAATTGTGGTGATGGTGAGAGG
GCTTCTACCTGTTAAAGCGTTGGGCTCGTTCCTGTTCACCAGAAGAGAGGGGAACGAAGCCACACACGGTATGGTGAGGAGAGCTCTTCTTCGAGAAAGCCATATCTGGT
TGGAGGGATGGCCGACGGAATTCCATTCTGTTTTTGCTTTGGAATGTTTGGATACTCTTTCTTAA
Protein sequenceShow/hide protein sequence
MNSENETSTSHMAGICLPKQFNVPSWISWIVDFGASAHICFSRYSFTSLLQDKFTLKTIDKGRLHKGLYLLDSSYLDYISPVDSKLNLDINMEPHTPPIIPLNDNCVDKL
MELDEQPTVDVQNFEDRTAIIPPSTPIDTIVETTTPIDAIEDTMSASTMYDSLCEKSDVIVPHRSSRTAQPPSYLWDFHCSLISRSDIPTASSRHPLQRYVSYLSFSDSH
RIYPIQLELDSWRIFNLFRQQTEDVSEVGEIVVMVRGLLPVKALGSFLFTRREGNEATHGMVRRALLRESHIWLEGWPTEFHSVFALECLDTLS