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Moc08g17680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g17680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:13418136..13418704
RNA-Seq ExpressionMoc08g17680
SyntenyMoc08g17680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]1.3e-0643.3Show/hide
Query:  RSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPPHPDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
        R+ R A+ ++ P  P  K  PS +                   P D E I ++GG+DYS +++D+RKHL  KK+ ASR PE SLS SRK+SNSNLKA
Subjt:  RSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPPHPDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]3.1e-0559.26Show/hide
Query:  PDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
        P + E I ++ GVDYS +++DLRKHL  KK+ AS  PE SLS SR++SNSNLKA
Subjt:  PDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]2.1e-2256.03Show/hide
Query:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPP--HPDDDERIADN
        MVQP + ANTAE R LNG N  Q E+DAK+ E+QT+AGQEVDPPRRSTRNAN  +PP HPR   G + R +   T  L  +   + P  HPDD E   +N
Subjt:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPP--HPDDDERIADN

Query:  GGVDYSQQEHDLRKHL
         G+DYS ++HDLRKHL
Subjt:  GGVDYSQQEHDLRKHL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.5e-0431.74Show/hide
Query:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRP--------------KLGPSPRPQAEQTVCLMTEM----
        MVQP D  NT + R L   +G+QREV A++VE Q   G   +P  RS R     + P HP+P               LG +P P  E    L  EM    
Subjt:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRP--------------KLGPSPRPQAEQTVCLMTEM----

Query:  -TRIPPHPDDDERIADNGGVDYSQ------QEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
           +      +E +   G    S+      +  DLR HL  +KR++S     S SCS K SN   ++
Subjt:  -TRIPPHPDDDERIADNGGVDYSQ------QEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

TrEMBL top hitse value%identityAlignment
A0A6J1DNM4 Ribonuclease H6.1e-0743.3Show/hide
Query:  RSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPPHPDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
        R+ R A+ ++ P  P  K  PS +                   P D E I ++GG+DYS +++D+RKHL  KK+ ASR PE SLS SRK+SNSNLKA
Subjt:  RSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPPHPDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

A0A6J1DPC9 uncharacterized protein LOC1110222801.5e-0559.26Show/hide
Query:  PDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
        P + E I ++ GVDYS +++DLRKHL  KK+ AS  PE SLS SR++SNSNLKA
Subjt:  PDDDERIADNGGVDYSQQEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

A0A6J1DR60 uncharacterized protein LOC1110234881.0e-2256.03Show/hide
Query:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPP--HPDDDERIADN
        MVQP + ANTAE R LNG N  Q E+DAK+ E+QT+AGQEVDPPRRSTRNAN  +PP HPR   G + R +   T  L  +   + P  HPDD E   +N
Subjt:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPP--HPDDDERIADN

Query:  GGVDYSQQEHDLRKHL
         G+DYS ++HDLRKHL
Subjt:  GGVDYSQQEHDLRKHL

A0A6J1DZJ1 uncharacterized protein LOC1110257382.2e-0431.74Show/hide
Query:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRP--------------KLGPSPRPQAEQTVCLMTEM----
        MVQP D  NT + R L   +G+QREV A++VE Q   G   +P  RS R     + P HP+P               LG +P P  E    L  EM    
Subjt:  MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRP--------------KLGPSPRPQAEQTVCLMTEM----

Query:  -TRIPPHPDDDERIADNGGVDYSQ------QEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA
           +      +E +   G    S+      +  DLR HL  +KR++S     S SCS K SN   ++
Subjt:  -TRIPPHPDDDERIADNGGVDYSQ------QEHDLRKHLVGKKRNASRVPEISLSCSRKYSNSNLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCCAACGGATTATGCGAACACCGCAGAATGGAGGGGCCTGAATGGGAAAAACGGCAACCAACGTGAAGTTGATGCCAAAATGGTCGAAGATCAGACTAGGGC
GGGGCAGGAGGTGGATCCACCTCGGAGGTCGACTCGCAATGCGAATATGACCATGCCTCCTACACATCCGAGACCCAAACTAGGTCCCAGTCCAAGGCCTCAGGCGGAGC
AGACGGTCTGCCTTATGACAGAGATGACCAGGATCCCCCCTCATCCCGATGATGATGAGCGCATTGCTGACAATGGAGGGGTCGACTATAGTCAACAAGAGCATGATCTT
AGAAAACATCTCGTCGGAAAAAAGAGGAACGCCTCACGAGTTCCAGAGATCTCTCTGTCCTGCTCCCGTAAATACTCTAACTCCAACCTCAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGCCAACGGATTATGCGAACACCGCAGAATGGAGGGGCCTGAATGGGAAAAACGGCAACCAACGTGAAGTTGATGCCAAAATGGTCGAAGATCAGACTAGGGC
GGGGCAGGAGGTGGATCCACCTCGGAGGTCGACTCGCAATGCGAATATGACCATGCCTCCTACACATCCGAGACCCAAACTAGGTCCCAGTCCAAGGCCTCAGGCGGAGC
AGACGGTCTGCCTTATGACAGAGATGACCAGGATCCCCCCTCATCCCGATGATGATGAGCGCATTGCTGACAATGGAGGGGTCGACTATAGTCAACAAGAGCATGATCTT
AGAAAACATCTCGTCGGAAAAAAGAGGAACGCCTCACGAGTTCCAGAGATCTCTCTGTCCTGCTCCCGTAAATACTCTAACTCCAACCTCAAAGCTTAG
Protein sequenceShow/hide protein sequence
MVQPTDYANTAEWRGLNGKNGNQREVDAKMVEDQTRAGQEVDPPRRSTRNANMTMPPTHPRPKLGPSPRPQAEQTVCLMTEMTRIPPHPDDDERIADNGGVDYSQQEHDL
RKHLVGKKRNASRVPEISLSCSRKYSNSNLKA