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Moc08g18510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g18510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr8:13986104..13987367
RNA-Seq ExpressionMoc08g18510
SyntenyMoc08g18510
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW79690.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.7e-4652.24Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L LQ+KNSI  DI+GL++ CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

Query:  A
        +
Subjt:  A

RVW86452.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.1e-4552.5Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L+LQ+KNSI  DI+GL + CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

XP_021674814.1 uncharacterized protein LOC110660727 [Hevea brasiliensis]6.6e-4850.48Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+T+DPP D++++ WL +DA L LQ++NSI  ++I L+N CE+VKEL  YL+FLYSGKGN+SRI+++CK FY+ E  ++SLT YFM+ KR+Y E   L
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAPN
        LP S D KV+ AQ EQLAV+SFL GLP  +  AK Q+LS SEI +L E  TRVLR E +Q   S  ++S L+ R+ N  +GN  +G+       +S+  N
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAPN

Query:  QGESSQED
           SS +D
Subjt:  QGESSQED

XP_022850817.1 uncharacterized protein LOC111372670 [Olea europaea var. sylvestris]9.5e-4749.76Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+ +DPPKD++K++WL +DA L LQI+NSI+ ++IGL+N CE+VKEL  YLEFLYS KGNVSRI+E+C+ FY+ E   +SLT +FM+ KR Y E   L
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAPN
        LP S D KV+  Q EQ+AV+SFL GLP  F  +K Q+LS SEIP L++  +RVLR E + P+   Q N+VLV +      GN Y         +  +  N
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAPN

Query:  QGESS
        +   S
Subjt:  QGESS

XP_038882618.1 uncharacterized protein LOC120073824 [Benincasa hispida]4.7e-4648.61Show/hide
Query:  MDDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIA
        MDDHITE+ P D +KK W  DD+ ++LQIKNSI+ +I+ LVN CE VK+L +YL+FLYSGK N++R+F++CK  YQ + G++SLT+YFME K    EF A
Subjt:  MDDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIA

Query:  LLPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAP
        L+P S D KV +A+ E+L ++SFL+GL P++ +AKDQ+LS   I +LEEA TR+LR EK+Q V S  S+S L+ R+      N Y+GN           P
Subjt:  LLPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAP

Query:  NQGESSQEDDDFLVYF
        N   S+     F+ Y+
Subjt:  NQGESSQEDDDFLVYF

TrEMBL top hitse value%identityAlignment
A0A438H537 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-4652.24Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L LQ+KNSI  DI+GL++ CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

Query:  A
        +
Subjt:  A

A0A438HPS2 Retrovirus-related Pol polyprotein from transposon TNT 1-945.1e-4652.5Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L+LQ+KNSI  DI+GL + CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

A5AWD0 Uncharacterized protein6.6e-4652.5Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L LQ+KNSI  DI+GL++ CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

A5BI89 Uncharacterized protein5.1e-4652.24Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L LQ+KNSI  DI+GL++ CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VLV   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

Query:  A
        +
Subjt:  A

B0FBS2 Uncharacterized protein6.6e-4651.74Show/hide
Query:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL
        DDH+TE+PP D ++K W+ DDA L LQ+KNSI  DI+GL++ CE+VKEL  YL+FLYSGKGNVSR++++   F+  E G +SLT YFM+ K++Y E  AL
Subjt:  DDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIAL

Query:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS
        +P S D +V+ AQ EQ+AV+SFL GLP  F  AK Q+LSGS+I +L+E  +RVLR E    V SSQ  +VL+   E + NA R N   GN    N    S
Subjt:  LPDSNDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLV---ERSTNANRGNTYQGNSTTSNAQRSS

Query:  A
        +
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATCACATAACTGAGGATCCGCCTAAGGATGAGAGCAAGAAAGCTTGGTTGTGGGATGATGCATCACTGGTTCTGCAGATCAAGAATTCGATCGAGGGT
GACATTATTGGCTTGGTCAATGAATGTGAGTATGTTAAAGAGTTACCTAAATATTTAGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCGAATATTTGAAATC
TGCAAGTGCTTCTACCAACTTGAGTTTGGTGACCAATCTCTTACAAATTACTTTATGGAACACAAACGAATTTACGTAGAGTTTATTGCATTACTCCCAGATAGT
AATGATGCAAAAGTTCGACTTGCCCAACACGAACAACTAGCAGTTATCAGTTTTCTTCTTGGTCTTCCACCTAGATTTTATGTGGCGAAAGACCAATTACTCTCT
GGTTCGGAAATTCCAGCTTTAGAGGAGGCATGCACTCGAGTACTTCGATTTGAGAAGTCACAACCCGTTTTGTCATCTCAGTCTAATAGTGTTTTGGTTGAACGT
AGTACAAATGCAAACAGAGGTAATACCTACCAAGGGAATTCCACGACTTCGAACGCTCAACGTTCTAGTGCTCCAAATCAGGGGGAGAGTTCACAAGAAGATGAT
GACTTTCTTGTATATTTCATTGTCTCTCCTTCCACTGAAGAGCTTCCTAGCAATACATCTTCCTATGTGCCTGATCCTTCTCTTCCCATCATTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGATCACATAACTGAGGATCCGCCTAAGGATGAGAGCAAGAAAGCTTGGTTGTGGGATGATGCATCACTGGTTCTGCAGATCAAGAATTCGATCGAGGGT
GACATTATTGGCTTGGTCAATGAATGTGAGTATGTTAAAGAGTTACCTAAATATTTAGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCGAATATTTGAAATC
TGCAAGTGCTTCTACCAACTTGAGTTTGGTGACCAATCTCTTACAAATTACTTTATGGAACACAAACGAATTTACGTAGAGTTTATTGCATTACTCCCAGATAGT
AATGATGCAAAAGTTCGACTTGCCCAACACGAACAACTAGCAGTTATCAGTTTTCTTCTTGGTCTTCCACCTAGATTTTATGTGGCGAAAGACCAATTACTCTCT
GGTTCGGAAATTCCAGCTTTAGAGGAGGCATGCACTCGAGTACTTCGATTTGAGAAGTCACAACCCGTTTTGTCATCTCAGTCTAATAGTGTTTTGGTTGAACGT
AGTACAAATGCAAACAGAGGTAATACCTACCAAGGGAATTCCACGACTTCGAACGCTCAACGTTCTAGTGCTCCAAATCAGGGGGAGAGTTCACAAGAAGATGAT
GACTTTCTTGTATATTTCATTGTCTCTCCTTCCACTGAAGAGCTTCCTAGCAATACATCTTCCTATGTGCCTGATCCTTCTCTTCCCATCATTACTTAA
Protein sequenceShow/hide protein sequence
MDDHITEDPPKDESKKAWLWDDASLVLQIKNSIEGDIIGLVNECEYVKELPKYLEFLYSGKGNVSRIFEICKCFYQLEFGDQSLTNYFMEHKRIYVEFIALLPDS
NDAKVRLAQHEQLAVISFLLGLPPRFYVAKDQLLSGSEIPALEEACTRVLRFEKSQPVLSSQSNSVLVERSTNANRGNTYQGNSTTSNAQRSSAPNQGESSQEDD
DFLVYFIVSPSTEELPSNTSSYVPDPSLPIIT