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Moc08g18660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g18660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr8:14069075..14080386
RNA-Seq ExpressionMoc08g18660
SyntenyMoc08g18660
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152369.1 uncharacterized protein K02A2.6-like [Momordica charantia]4.7e-0572.73Show/hide
Query:  SEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQK
        S ++VCLT+VVKKTRKKKN+AEI P AI R RTRAAVA L  QK
Subjt:  SEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQK

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]2.5e-2259.48Show/hide
Query:  AIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP---------------------FEKGFNEAHEPVPEYVKRSLVEN
        A+ RPRTR AVA L  QK  E GPSKKAK ARV R AEEPLEEAN+EEPD TEQTP                      E+GF+EA EPVPEYV++ +VEN
Subjt:  AIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP---------------------FEKGFNEAHEPVPEYVKRSLVEN

Query:  GGETLFTPTPRVSEAL
        G ETLF P  RVSEAL
Subjt:  GGETLFTPTPRVSEAL

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]1.0e-2857.34Show/hide
Query:  TSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP-----------------
        TSEE+VCLT+VVKK R KKN+ EIVP A  RP TRA +A L  QK  E GP KKAKR +  RR+EEPL+E NDEE D  EQTP                 
Subjt:  TSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP-----------------

Query:  ----FEKGFNEAHEPVPEYVKRSLVENGGETLFTPTPRVSEAL
             EKGF+EA EPVP+Y+KR L+ENG ETLF PT RVSE L
Subjt:  ----FEKGFNEAHEPVPEYVKRSLVENGGETLFTPTPRVSEAL

XP_022158850.1 uncharacterized protein LOC111025315 isoform X1 [Momordica charantia]3.9e-0449.18Show/hide
Query:  KTSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARV
        ++S+E+VCL   VK  +K+K      PD I +P TRA VAHL  QK+   GPSKKAKR+++
Subjt:  KTSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARV

TrEMBL top hitse value%identityAlignment
A0A6J1DFT9 uncharacterized protein K02A2.6-like2.3e-0572.73Show/hide
Query:  SEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQK
        S ++VCLT+VVKKTRKKKN+AEI P AI R RTRAAVA L  QK
Subjt:  SEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQK

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.2e-2259.48Show/hide
Query:  AIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP---------------------FEKGFNEAHEPVPEYVKRSLVEN
        A+ RPRTR AVA L  QK  E GPSKKAK ARV R AEEPLEEAN+EEPD TEQTP                      E+GF+EA EPVPEYV++ +VEN
Subjt:  AIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP---------------------FEKGFNEAHEPVPEYVKRSLVEN

Query:  GGETLFTPTPRVSEAL
        G ETLF P  RVSEAL
Subjt:  GGETLFTPTPRVSEAL

A0A6J1DW11 uncharacterized protein LOC1110236205.0e-2957.34Show/hide
Query:  TSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP-----------------
        TSEE+VCLT+VVKK R KKN+ EIVP A  RP TRA +A L  QK  E GP KKAKR +  RR+EEPL+E NDEE D  EQTP                 
Subjt:  TSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPDFTEQTP-----------------

Query:  ----FEKGFNEAHEPVPEYVKRSLVENGGETLFTPTPRVSEAL
             EKGF+EA EPVP+Y+KR L+ENG ETLF PT RVSE L
Subjt:  ----FEKGFNEAHEPVPEYVKRSLVENGGETLFTPTPRVSEAL

A0A6J1DX02 uncharacterized protein LOC111025315 isoform X11.9e-0449.18Show/hide
Query:  KTSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARV
        ++S+E+VCL   VK  +K+K      PD I +P TRA VAHL  QK+   GPSKKAKR+++
Subjt:  KTSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGAGTCCCTTGCACAAGAGCAATAAAGAGCATCTGGTCTTGTGGATGTACCTAATGAGGCCATGGAGGAATCATCTTCCTCTTCCTCAAAAGACCTCAGAGGA
GCAAGTGTGCTTGACCCAAGTGGTGAAGAAAACACGAAAGAAGAAAAATATTGCAGAAATTGTGCCTGACGCAATTCCCAGGCCAAGAACCCGAGCTGCTGTAGCACACT
TGTTTGTCCAAAAAGTTGTCGAGGTTGGTCCATCTAAAAAAGCCAAGCGGGCTAGGGTGCCAAGAAGGGCAGAAGAGCCACTTGAGGAGGCCAATGACGAGGAGCCCGAT
TTTACTGAGCAAACACCTTTTGAGAAGGGCTTTAATGAAGCTCATGAGCCTGTGCCGGAATATGTCAAGAGAAGTCTTGTGGAGAATGGTGGGGAGACGTTGTTTACCCC
AACTCCGCGTGTATCTGAGGCCTTGGCAGGAGTGGAGGCTGATGATGCGGATGTAGTGACGCCAAAGAAGCCGATCACATCCCTAAGACCTCAGATGGTGGCGATCTATA
TGTCCTGGAAAGCTCTTTTAAAGACCTTTAATTTATTACCTGATTTGACTATATACAGCAAAAAGGCGCTTGAGCGTGGGGGAGGCGTTAGCGCGCGGACGGAGGAGGCT
GGCACAGGCATAGGCGGGCGACAGGCCGCACATAGCATGGGTGCTGTGAGGTTAGCGACACATTGGCGTGCGCGGCAAGGGCACACGCGCACAGGGACATGCGACTGGTG
TTGCTTGCGTGCAAATGTCCTCCGCGCATGGCAAGACATACTCATGCTACGGGTTTCTCACTTTGCTGACACGACGGATGGGGATGGGGCTGCTGCTTTAAAATGCTGCA
ACGTTGCCAAGATACTCGCATCTCTCTTCTTCGCCTTCTCAGCCGATGCAGACTGCACCTCTTCCATTCATGAGAGCTGTTTTTGCATTTTGGCGAGCTGGGCCATCATT
TCATTGATGGCCACATTCTACACAGCTCCACGGCAAGTAGAGTTTGATGATAAGGCTGGGGAAGAACAAACAGTCAGTTTTCTTCATTGCACATTGAGTCATGTCCCGGT
GGATAAGCTATCCGACGTTGATGGAGTGACCTTCCAAAATGCAGGCCAACAGAAGGACTCCGTCGTTCGTAACAAACCAGTCATGCGTGGTAGACATGACCCGGCTTTTA
ATGAAGTAGAGCCAAACGTTGGCTTTCCCCGTACAAGTCCGTGGTCTTTATCGCCCTGTAGCTCGCCTCACCTCCGGGTCAACGAACTTCTGGAATGCTGCCTGGCCAGC
AAGGACAACCGTGATGTGCTTGGAGGAGCTCGGTGTTGGAGGAATCTGGGAAACAATGACCATCCAGCTGCGACACTTCCCTTCAAATGTGAAGCGGATTTTGTGGCTTT
TGATTTGGCAGGGGACGGTAGAGGCACTTTTGGTGTTTTCCTTTTCTTAGCCGGGCTAGAGCTTGGGATAGCTTGGGCTAGCCGCTTACTCTTTCCAATTCGTAAGGTCG
GTTCATCAGTGGGTGTGGATTTGTTGGGTCTGAGAGGAGGAGGCTGTAGGGTCAGGGGCGTTTACCCGATGACGGTGACAGGAGGAGGCGGCGGCGAAAGCTCAGTGTCA
GCCGGAGTGTGCTCCGAGCTGATGGAACTTTGCTGGGAAGGACTCTACACATCAAAGGCCTCTAGCGGAATGGTTTTAGCGGCCTCCTTGAAGTCGCTGCTCGACCCAGA
AGTTGCTGAGAGTTCCAGCTTCAGCGCTCTCTTCCTATTCGCCTTGTATTTAATTCTAGGCATTCTGGGTTATAGTTTTGGGAAGAAGAAAAGGGTTTTGAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGAGTCCCTTGCACAAGAGCAATAAAGAGCATCTGGTCTTGTGGATGTACCTAATGAGGCCATGGAGGAATCATCTTCCTCTTCCTCAAAAGACCTCAGAGGA
GCAAGTGTGCTTGACCCAAGTGGTGAAGAAAACACGAAAGAAGAAAAATATTGCAGAAATTGTGCCTGACGCAATTCCCAGGCCAAGAACCCGAGCTGCTGTAGCACACT
TGTTTGTCCAAAAAGTTGTCGAGGTTGGTCCATCTAAAAAAGCCAAGCGGGCTAGGGTGCCAAGAAGGGCAGAAGAGCCACTTGAGGAGGCCAATGACGAGGAGCCCGAT
TTTACTGAGCAAACACCTTTTGAGAAGGGCTTTAATGAAGCTCATGAGCCTGTGCCGGAATATGTCAAGAGAAGTCTTGTGGAGAATGGTGGGGAGACGTTGTTTACCCC
AACTCCGCGTGTATCTGAGGCCTTGGCAGGAGTGGAGGCTGATGATGCGGATGTAGTGACGCCAAAGAAGCCGATCACATCCCTAAGACCTCAGATGGTGGCGATCTATA
TGTCCTGGAAAGCTCTTTTAAAGACCTTTAATTTATTACCTGATTTGACTATATACAGCAAAAAGGCGCTTGAGCGTGGGGGAGGCGTTAGCGCGCGGACGGAGGAGGCT
GGCACAGGCATAGGCGGGCGACAGGCCGCACATAGCATGGGTGCTGTGAGGTTAGCGACACATTGGCGTGCGCGGCAAGGGCACACGCGCACAGGGACATGCGACTGGTG
TTGCTTGCGTGCAAATGTCCTCCGCGCATGGCAAGACATACTCATGCTACGGGTTTCTCACTTTGCTGACACGACGGATGGGGATGGGGCTGCTGCTTTAAAATGCTGCA
ACGTTGCCAAGATACTCGCATCTCTCTTCTTCGCCTTCTCAGCCGATGCAGACTGCACCTCTTCCATTCATGAGAGCTGTTTTTGCATTTTGGCGAGCTGGGCCATCATT
TCATTGATGGCCACATTCTACACAGCTCCACGGCAAGTAGAGTTTGATGATAAGGCTGGGGAAGAACAAACAGTCAGTTTTCTTCATTGCACATTGAGTCATGTCCCGGT
GGATAAGCTATCCGACGTTGATGGAGTGACCTTCCAAAATGCAGGCCAACAGAAGGACTCCGTCGTTCGTAACAAACCAGTCATGCGTGGTAGACATGACCCGGCTTTTA
ATGAAGTAGAGCCAAACGTTGGCTTTCCCCGTACAAGTCCGTGGTCTTTATCGCCCTGTAGCTCGCCTCACCTCCGGGTCAACGAACTTCTGGAATGCTGCCTGGCCAGC
AAGGACAACCGTGATGTGCTTGGAGGAGCTCGGTGTTGGAGGAATCTGGGAAACAATGACCATCCAGCTGCGACACTTCCCTTCAAATGTGAAGCGGATTTTGTGGCTTT
TGATTTGGCAGGGGACGGTAGAGGCACTTTTGGTGTTTTCCTTTTCTTAGCCGGGCTAGAGCTTGGGATAGCTTGGGCTAGCCGCTTACTCTTTCCAATTCGTAAGGTCG
GTTCATCAGTGGGTGTGGATTTGTTGGGTCTGAGAGGAGGAGGCTGTAGGGTCAGGGGCGTTTACCCGATGACGGTGACAGGAGGAGGCGGCGGCGAAAGCTCAGTGTCA
GCCGGAGTGTGCTCCGAGCTGATGGAACTTTGCTGGGAAGGACTCTACACATCAAAGGCCTCTAGCGGAATGGTTTTAGCGGCCTCCTTGAAGTCGCTGCTCGACCCAGA
AGTTGCTGAGAGTTCCAGCTTCAGCGCTCTCTTCCTATTCGCCTTGTATTTAATTCTAGGCATTCTGGGTTATAGTTTTGGGAAGAAGAAAAGGGTTTTGAGAGCTTAA
Protein sequenceShow/hide protein sequence
MIRSPLHKSNKEHLVLWMYLMRPWRNHLPLPQKTSEEQVCLTQVVKKTRKKKNIAEIVPDAIPRPRTRAAVAHLFVQKVVEVGPSKKAKRARVPRRAEEPLEEANDEEPD
FTEQTPFEKGFNEAHEPVPEYVKRSLVENGGETLFTPTPRVSEALAGVEADDADVVTPKKPITSLRPQMVAIYMSWKALLKTFNLLPDLTIYSKKALERGGGVSARTEEA
GTGIGGRQAAHSMGAVRLATHWRARQGHTRTGTCDWCCLRANVLRAWQDILMLRVSHFADTTDGDGAAALKCCNVAKILASLFFAFSADADCTSSIHESCFCILASWAII
SLMATFYTAPRQVEFDDKAGEEQTVSFLHCTLSHVPVDKLSDVDGVTFQNAGQQKDSVVRNKPVMRGRHDPAFNEVEPNVGFPRTSPWSLSPCSSPHLRVNELLECCLAS
KDNRDVLGGARCWRNLGNNDHPAATLPFKCEADFVAFDLAGDGRGTFGVFLFLAGLELGIAWASRLLFPIRKVGSSVGVDLLGLRGGGCRVRGVYPMTVTGGGGGESSVS
AGVCSELMELCWEGLYTSKASSGMVLAASLKSLLDPEVAESSSFSALFLFALYLILGILGYSFGKKKRVLRA