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Moc08g18730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g18730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:14144445..14144675
RNA-Seq ExpressionMoc08g18730
SyntenyMoc08g18730
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131678.1 uncharacterized protein LOC111004795 [Momordica charantia]5.7e-1465.15Show/hide
Query:  KYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDID
        +YL+RV+D L+ FSKYE  QIPR+QNVN + LARLAA  ET LGRTV VEILPEP+I+ ++ MD+D
Subjt:  KYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDID

XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]1.4e-2076.32Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        M KYLS+VR+ L +FSKYEIRQIPRAQNVN D LARLA  YETDLGRTV VEIL  P+IEA+E MDID+Q QPEEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.8e-2177.63Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLS+VR+ L +FSKYEI QIPRAQNV+ D LARLAA YETDLGRTV VEILPEP+IEA+E MDID Q Q EEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]2.5e-2280.26Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLS+VR+ L +FSKYEIRQIP AQNVN DVLARLA AYETDLGRTV VEILP P+IEA+E MDID Q QPEEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]9.1e-2075Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLSRV+D L +FSK+EIRQIP  QNVN D LARLAAAY TDLGRT+ VEIL EP+I+A+E MDIDEQ Q EEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

TrEMBL top hitse value%identityAlignment
A0A6J1BU48 uncharacterized protein LOC1110047952.8e-1465.15Show/hide
Query:  KYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDID
        +YL+RV+D L+ FSKYE  QIPR+QNVN + LARLAA  ET LGRTV VEILPEP+I+ ++ MD+D
Subjt:  KYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDID

A0A6J1DJC7 Ribonuclease H6.8e-2176.32Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        M KYLS+VR+ L +FSKYEIRQIPRAQNVN D LARLA  YETDLGRTV VEIL  P+IEA+E MDID+Q QPEEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

A0A6J1DVC6 Ribonuclease H3.0e-2177.63Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLS+VR+ L +FSKYEI QIPRAQNV+ D LARLAA YETDLGRTV VEILPEP+IEA+E MDID Q Q EEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

A0A6J1DZU0 Ribonuclease H1.2e-2280.26Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLS+VR+ L +FSKYEIRQIP AQNVN DVLARLA AYETDLGRTV VEILP P+IEA+E MDID Q QPEEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

A0A6J1E1Q5 uncharacterized protein LOC1110256234.4e-2075Show/hide
Query:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN
        MAKYLSRV+D L +FSK+EIRQIP  QNVN D LARLAAAY TDLGRT+ VEIL EP+I+A+E MDIDEQ Q EEN
Subjt:  MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTATCTTTCTCGGGTAAGAGACCATCTCACCCGATTCTCGAAATATGAGATCCGACAAATTCCTCGTGCTCAGAATGTCAACACAGATGTATTAGCC
CGGTTAGCTGCAGCTTATGAAACCGACCTAGGAAGAACTGTGCTGGTAGAAATTTTGCCCGAGCCGACCATAGAGGCTCGGGAGACAATGGATATCGACGAGCAA
GAGCAACCAGAGGAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTATCTTTCTCGGGTAAGAGACCATCTCACCCGATTCTCGAAATATGAGATCCGACAAATTCCTCGTGCTCAGAATGTCAACACAGATGTATTAGCC
CGGTTAGCTGCAGCTTATGAAACCGACCTAGGAAGAACTGTGCTGGTAGAAATTTTGCCCGAGCCGACCATAGAGGCTCGGGAGACAATGGATATCGACGAGCAA
GAGCAACCAGAGGAGAACTGA
Protein sequenceShow/hide protein sequence
MAKYLSRVRDHLTRFSKYEIRQIPRAQNVNTDVLARLAAAYETDLGRTVLVEILPEPTIEARETMDIDEQEQPEEN