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Moc08g18910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g18910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr8:14270263..14271010
RNA-Seq ExpressionMoc08g18910
SyntenyMoc08g18910
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]4.8e-2178.67Show/hide
Query:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        S+L T+     +KFVLQEDCP+A  PNATVAVR  YD+ IKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
Subjt:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]1.6e-2184.38Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++FVLQEDCP+AP PNAT+AVRN YD+ IKANDKAKVYIL+SISDVLAKKHEDT+TAKEIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]3.9e-1567.19Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++F+L E+CP+AP PNA  A R+ YD+ IKANDKA VYIL SISDVL+KKHE  +TA+EIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]3.4e-1979.69Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++FVLQEDCP+AP PNATVAVRN+YD+ IKANDKAKV ILASISDVLAKKHE+++  KEIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]4.8e-2174.67Show/hide
Query:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        S+L T+     ++FVLQEDCP+AP+ NATVAVRN YD+ IK+NDKAKVYILASISDVLAKKHEDT+T KEIMDSL
Subjt:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200952.3e-2178.67Show/hide
Query:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        S+L T+     +KFVLQEDCP+A  PNATVAVR  YD+ IKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
Subjt:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

A0A6J1DMS3 uncharacterized protein LOC1110220008.0e-2284.38Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++FVLQEDCP+AP PNAT+AVRN YD+ IKANDKAKVYIL+SISDVLAKKHEDT+TAKEIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

A0A6J1DW68 uncharacterized protein LOC1110246371.7e-1979.69Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++FVLQEDCP+AP PNATVAVRN+YD+ IKANDKAKV ILASISDVLAKKHE+++  KEIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

A0A6J1DWI4 uncharacterized protein LOC1110241451.9e-1567.19Show/hide
Query:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        ++F+L E+CP+AP PNA  A R+ YD+ IKANDKA VYIL SISDVL+KKHE  +TA+EIMDSL
Subjt:  VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

A0A6J1DWL0 uncharacterized protein LOC1110247342.3e-2174.67Show/hide
Query:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL
        S+L T+     ++FVLQEDCP+AP+ NATVAVRN YD+ IK+NDKAKVYILASISDVLAKKHEDT+T KEIMDSL
Subjt:  SHLRTV-----VKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTGCGTGTTCTCCTGGAGCGACCATCCCTACGGAGGGTTCATTGATTATTGGGGTGGACCTCTGAGGATCGAAAATGATGGGTCACACTTACGAACAGTTGTTAA
GTTCGTTTTGCAAGAGGATTGTCCTGAAGCTCCTATGCCTAACGCCACTGTGGCGGTGCGCAACGTCTATGACAAATGTATCAAGGCCAATGACAAGGCCAAGGTCTACA
TCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAGGACACGATCACCGCTAAGGAGATCATGGACTCGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTGCGTGTTCTCCTGGAGCGACCATCCCTACGGAGGGTTCATTGATTATTGGGGTGGACCTCTGAGGATCGAAAATGATGGGTCACACTTACGAACAGTTGTTAA
GTTCGTTTTGCAAGAGGATTGTCCTGAAGCTCCTATGCCTAACGCCACTGTGGCGGTGCGCAACGTCTATGACAAATGTATCAAGGCCAATGACAAGGCCAAGGTCTACA
TCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAGGACACGATCACCGCTAAGGAGATCATGGACTCGCTGTAG
Protein sequenceShow/hide protein sequence
MTCVFSWSDHPYGGFIDYWGGPLRIENDGSHLRTVVKFVLQEDCPEAPMPNATVAVRNVYDKCIKANDKAKVYILASISDVLAKKHEDTITAKEIMDSL