; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g18970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g18970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:14301877..14302524
RNA-Seq ExpressionMoc08g18970
SyntenyMoc08g18970
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65822.1 hypothetical protein VITISV_043389 [Vitis vinifera]2.2e-1044.44Show/hide
Query:  WDVVEEGFKIPTKDIDSIRVVKK------PKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVD--SECKNAFDEDDV
        WD++++G   PTK +D + +++        KVT IQEAKD   L M+EL+GSLMTYEI + K +++ + KK+KSI LKA T E +   E K + +EDD+
Subjt:  WDVVEEGFKIPTKDIDSIRVVKK------PKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVD--SECKNAFDEDDV

RVW93943.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]3.7e-1044.86Show/hide
Query:  WDVVEEGFKIPTKDIDSIRVVK---------------KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLE---VDSEC
        WDV+E+G   PTK +D + V K                 KVT IQEAKDL  L M+EL+GSLMTYEI + K +++ + KK+KSIALKA T E   V+ E 
Subjt:  WDVVEEGFKIPTKDIDSIRVVK---------------KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLE---VDSEC

Query:  KNAFDED
          + +E+
Subjt:  KNAFDED

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]7.2e-2284.51Show/hide
Query:  KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        +PKVT+IQEAKDLKTLSMDEL+GSLMT+EIKIKKNMEDEKKKK+KSIALKAITLEVD E +N  DEDDV Y
Subjt:  KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]2.0e-1156.79Show/hide
Query:  KDIDSIRVVKKPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        K + S+    + KVT IQEAKDL  L ++EL+GSLMT+EI +K+++EDE KKK KSIALK I+LEVD E ++  DEDD+ Y
Subjt:  KDIDSIRVVKKPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]2.0e-1156.79Show/hide
Query:  KDIDSIRVVKKPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        K + S+    + KVT IQEAKDL  L ++EL+GSLMT+EI +K+++EDE KKK KSIALK I+LEVD E ++  DEDD+ Y
Subjt:  KDIDSIRVVKKPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

TrEMBL top hitse value%identityAlignment
A0A438IB44 Retrovirus-related Pol polyprotein from transposon RE11.8e-1044.86Show/hide
Query:  WDVVEEGFKIPTKDIDSIRVVK---------------KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLE---VDSEC
        WDV+E+G   PTK +D + V K                 KVT IQEAKDL  L M+EL+GSLMTYEI + K +++ + KK+KSIALKA T E   V+ E 
Subjt:  WDVVEEGFKIPTKDIDSIRVVK---------------KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLE---VDSEC

Query:  KNAFDED
          + +E+
Subjt:  KNAFDED

A0A6J1DS74 uncharacterized protein LOC1110238063.5e-2284.51Show/hide
Query:  KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        +PKVT+IQEAKDLKTLSMDEL+GSLMT+EIKIKKNMEDEKKKK+KSIALKAITLEVD E +N  DEDDV Y
Subjt:  KPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

A0A6J1F0H1 uncharacterized protein LOC1114380998.9e-1065.22Show/hide
Query:  KVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        KVT IQEAKDL  L +DELVGSLMT+EI +  +ME+E KKK KSIALK+I  +VDSE ++  DEDDV Y
Subjt:  KVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

A0A6J1I2X4 uncharacterized protein LOC1114704658.9e-1065.22Show/hide
Query:  KVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY
        KVT IQEAKDL  L +DELVGSLMT+EI +  +ME+E KKK KSIALK+I  +VDSE ++  DEDDV Y
Subjt:  KVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY

A5BM96 Uncharacterized protein1.0e-1044.44Show/hide
Query:  WDVVEEGFKIPTKDIDSIRVVKK------PKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVD--SECKNAFDEDDV
        WD++++G   PTK +D + +++        KVT IQEAKD   L M+EL+GSLMTYEI + K +++ + KK+KSI LKA T E +   E K + +EDD+
Subjt:  WDVVEEGFKIPTKDIDSIRVVKK------PKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVD--SECKNAFDEDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGTGGGATGTTGTTGAAGAAGGATTTAAAATTCCAACAAAAGATATTGATAGTATTAGAGTTGTAAAGAAGCCTAAAGTCACCGTCATTCAAGAGGCAAAGGA
TCTCAAGACTCTCTCCATGGACGAACTCGTTGGTTCGTTGATGACGTATGAGATAAAGATCAAGAAAAACATGGAGGATGAGAAGAAAAAGAAAGAGAAGAGCATAGCAT
TAAAGGCCATCACCTTGGAAGTTGACTCCGAATGTAAGAATGCCTTTGATGAAGATGATGTGACCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGTGGGATGTTGTTGAAGAAGGATTTAAAATTCCAACAAAAGATATTGATAGTATTAGAGTTGTAAAGAAGCCTAAAGTCACCGTCATTCAAGAGGCAAAGGA
TCTCAAGACTCTCTCCATGGACGAACTCGTTGGTTCGTTGATGACGTATGAGATAAAGATCAAGAAAAACATGGAGGATGAGAAGAAAAAGAAAGAGAAGAGCATAGCAT
TAAAGGCCATCACCTTGGAAGTTGACTCCGAATGTAAGAATGCCTTTGATGAAGATGATGTGACCTATTGA
Protein sequenceShow/hide protein sequence
MIWWDVVEEGFKIPTKDIDSIRVVKKPKVTVIQEAKDLKTLSMDELVGSLMTYEIKIKKNMEDEKKKKEKSIALKAITLEVDSECKNAFDEDDVTY