; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g25480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g25480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:18395867..18396392
RNA-Seq ExpressionMoc08g25480
SyntenyMoc08g25480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]1.1e-1739.26Show/hide
Query:  GGCFNAVQRRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAITCN-------------SVEAYHMEM
        G  +  +QRR  +     +  + +IK K+  F+G+T+PEEYIQWE++VE VF  +  ++E+KV+  V + +DYA T +             SVE Y+ EM
Subjt:  GGCFNAVQRRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAITCN-------------SVEAYHMEM

Query:  QMLLEELDLYEDEEVTMARYLRGLKKEIAERLDLQ
          L++ LDL E+ E  MA++L GL KEI +++DLQ
Subjt:  QMLLEELDLYEDEEVTMARYLRGLKKEIAERLDLQ

KAG2411297.1 hypothetical protein I3760_Q013700, partial [Carya illinoinensis]2.6e-1942.75Show/hide
Query:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT----------------CNSVEAYHMEMQMLLE
        RRN RG   VD  L SIK K+P F GRT+PE Y++WE+++E +F+ +  S+E+K+KL V +  DYAI                   SVE YH EM++ + 
Subjt:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT----------------CNSVEAYHMEMQMLLE

Query:  ELDLYEDEEVTMARYLRGLKKEIAERLDLQF
          ++ ED E TMAR+L GL +EIA  ++LQ+
Subjt:  ELDLYEDEEVTMARYLRGLKKEIAERLDLQF

PKI42218.1 hypothetical protein CRG98_037398 [Punica granatum]6.5e-1845.83Show/hide
Query:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT------CNSVEAYHMEMQMLLEELDLYEDEEV
        RR+      VD  +GSIK  +P F GR +P+ +I+WER+VE VFD +  S+E+KVKL   +  DYAI         SVE YH EM++ L   ++ ED+E 
Subjt:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT------CNSVEAYHMEMQMLLEELDLYEDEEV

Query:  TMARYLRGLKKEIAERLDLQ
        TMAR+L GL  EIA  ++LQ
Subjt:  TMARYLRGLKKEIAERLDLQ

XP_012448727.1 PREDICTED: uncharacterized protein LOC105771894 [Gossypium raimondii]5.5e-1742.11Show/hide
Query:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAITCNSVEAYHMEMQMLLEELDLYEDEEVTMARYL
        R N R  H VD  + +IK  +P F GR++P+ Y+ WE +VE VF+ Y  S+++KV+L   +  DYA+   SVE Y  EM+M +   ++ ED E TMAR+L
Subjt:  RRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAITCNSVEAYHMEMQMLLEELDLYEDEEVTMARYL

Query:  RGLKKEIAERLDLQ
         GL  EI   +++Q
Subjt:  RGLKKEIAERLDLQ

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.4e-1737.65Show/hide
Query:  RGVHN----------VDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT--------------------------
        RG HN          VD  LG+IK KL  FYG+T+PE YIQW ++VE VFD +  S+E+KV+L +AQ +DYA+T                          
Subjt:  RGVHN----------VDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT--------------------------

Query:  ------------------------CNSVEAYHMEMQMLLEELDLYEDEEVTMARYLRGLKKEIAERLDLQ
                                  SVE Y+ EM  L+  LDL ED E  MAR+L GL KEIA+++DLQ
Subjt:  ------------------------CNSVEAYHMEMQMLLEELDLYEDEEVTMARYLRGLKKEIAERLDLQ

TrEMBL top hitse value%identityAlignment
A0A2N9F8T6 Reverse transcriptase domain-containing protein1.8e-1841.27Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY
        N  G   +D  LGSIK K+P   GRT+PE Y++WE++++ VFD +   +E+KVKL+V +  DYAI                SVE YH EM++ +   ++ 
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY

Query:  EDEEVTMARYLRGLKKEIAERLDLQF
        ED E TMAR+L GL ++IA  ++LQ+
Subjt:  EDEEVTMARYLRGLKKEIAERLDLQF

A0A2N9GBV6 Uncharacterized protein5.7e-2044.8Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAI-------------TCNSVEAYHMEMQMLLEELDLY
        N  G   VD +LG+IK K+P F GRT+PE Y++WE++++ VFDY+  S+E+KVKL V +  DYAI                SVE YH EM++ +   ++ 
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAI-------------TCNSVEAYHMEMQMLLEELDLY

Query:  EDEEVTMARYLRGLKKEIAERLDLQ
        ED E TMAR+L GL ++IA  L+LQ
Subjt:  EDEEVTMARYLRGLKKEIAERLDLQ

A0A2N9GTF8 CCHC-type domain-containing protein2.8e-1944Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY
        N  G   VD +LGSIK K+P F GRT+PE Y++WE++++ VFD +  S+E+KVKL V +  DYAI                SVE YH EM++ +   ++ 
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY

Query:  EDEEVTMARYLRGLKKEIAERLDLQ
        ED E TMAR+L GL ++IA  ++LQ
Subjt:  EDEEVTMARYLRGLKKEIAERLDLQ

A0A2N9IV33 Uncharacterized protein3.3e-2045.6Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY
        NL G   VD  LGSIK K+P F GRT+PE Y++WE+++E VFD +  S+E+KVKL V +  DYAI                SVE YH EM++ +   ++ 
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT-------------CNSVEAYHMEMQMLLEELDLY

Query:  EDEEVTMARYLRGLKKEIAERLDLQ
        ED E TMAR+L GL ++IA  ++LQ
Subjt:  EDEEVTMARYLRGLKKEIAERLDLQ

A0A2N9IYR8 Reverse transcriptase domain-containing protein2.6e-2046.49Show/hide
Query:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT--CNSVEAYHMEMQMLLEELDLYEDEEVTMARYL
        N  G   VD +LGSIK K+P F GRT+PE Y++WE++++ VFDY+  S+E+KVKL V +  +YAI     SVE YH EM++ +   ++ ED E TMA++ 
Subjt:  NLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAIT--CNSVEAYHMEMQMLLEELDLYEDEEVTMARYL

Query:  RGLKKEIAERLDLQ
         GL ++IA  ++LQ
Subjt:  RGLKKEIAERLDLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGGTGGATGTTTCAATGCTGTCCAAAGGAGAAATCTAAGAGGAGTTCATAATGTTGATCATACCTTGGGAAGCATCAAGCCTAAACTTCCTATGTTC
TATGGTAGGACAAACCCGGAGGAATACATTCAATGGGAAAGGCAAGTTGAACGTGTCTTTGATTATTATCCTTTAAGTGATGAAAGAAAGGTAAAACTCATTGTT
GCTCAACTTCGAGATTATGCAATTACTTGCAATAGCGTGGAGGCTTACCACATGGAGATGCAAATGTTGCTTGAGGAGCTTGATCTTTATGAGGATGAGGAAGTT
ACAATGGCTCGTTACTTAAGAGGACTCAAGAAGGAGATTGCAGAACGACTTGATCTTCAATTTGCGAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGGTGGATGTTTCAATGCTGTCCAAAGGAGAAATCTAAGAGGAGTTCATAATGTTGATCATACCTTGGGAAGCATCAAGCCTAAACTTCCTATGTTC
TATGGTAGGACAAACCCGGAGGAATACATTCAATGGGAAAGGCAAGTTGAACGTGTCTTTGATTATTATCCTTTAAGTGATGAAAGAAAGGTAAAACTCATTGTT
GCTCAACTTCGAGATTATGCAATTACTTGCAATAGCGTGGAGGCTTACCACATGGAGATGCAAATGTTGCTTGAGGAGCTTGATCTTTATGAGGATGAGGAAGTT
ACAATGGCTCGTTACTTAAGAGGACTCAAGAAGGAGATTGCAGAACGACTTGATCTTCAATTTGCGAAGATTTAG
Protein sequenceShow/hide protein sequence
MEYGGCFNAVQRRNLRGVHNVDHTLGSIKPKLPMFYGRTNPEEYIQWERQVERVFDYYPLSDERKVKLIVAQLRDYAITCNSVEAYHMEMQMLLEELDLYEDEEV
TMARYLRGLKKEIAERLDLQFAKI