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Moc08g25830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g25830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr8:18582917..18584492
RNA-Seq ExpressionMoc08g25830
SyntenyMoc08g25830
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]1.9e-1991.67Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        MHSELE  EVELTVDDVSALLARL VEPSLRQRI VAQKEDPSLAKGF MVGHGDFTLSG
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
XP_022156880.1 uncharacterized protein LOC111023714 [Momordica charantia]5.0e-1270.18Show/hide
Query:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        EL+R EVEL V+DVSA+LARL VEP+LRQR+  AQ+ DPSL+KGF MVG GDF+L G
Subjt:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
XP_022157022.1 uncharacterized protein LOC111023849 [Momordica charantia]3.9e-1289.58Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGF
        MHSELE LEVELTVDDVSA LARL +EPSLRQRI VAQKEDPSLAKGF
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGF
XP_022157823.1 uncharacterized protein LOC111024441 [Momordica charantia]1.5e-1990Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        +HSELERLEVELT+DDV ALLARL VEPSLRQRI VAQKEDPSLAKGF MVGHGDFTLSG
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
XP_022159308.1 uncharacterized protein LOC111025717 [Momordica charantia]2.3e-0966.07Show/hide
Query:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLS
        EL+R EVEL V DVSA+LARL VE +LRQ++  A+K DPSL+KGF +VG GDF+LS
Subjt:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLS
TrEMBL top hitse value%identityAlignment
A0A6J1DQB9 Reverse transcriptase9.2e-2091.67Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        MHSELE  EVELTVDDVSALLARL VEPSLRQRI VAQKEDPSLAKGF MVGHGDFTLSG
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
A0A6J1DRK1 uncharacterized protein LOC1110237142.4e-1270.18Show/hide
Query:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        EL+R EVEL V+DVSA+LARL VEP+LRQR+  AQ+ DPSL+KGF MVG GDF+L G
Subjt:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
A0A6J1DTG8 Reverse transcriptase1.9e-1289.58Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGF
        MHSELE LEVELTVDDVSA LARL +EPSLRQRI VAQKEDPSLAKGF
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGF
A0A6J1DUE8 uncharacterized protein LOC1110244417.1e-2090Show/hide
Query:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
        +HSELERLEVELT+DDV ALLARL VEPSLRQRI VAQKEDPSLAKGF MVGHGDFTLSG
Subjt:  MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSG
A0A6J1DYG1 uncharacterized protein LOC1110257171.1e-0966.07Show/hide
Query:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLS
        EL+R EVEL V DVSA+LARL VE +LRQ++  A+K DPSL+KGF +VG GDF+LS
Subjt:  ELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGCGAGTTGGAACGCTTGGAAGTAGAGCTGACGGTGGATGATGTCTCCGCACTGTTGGCTCGACTCTTAGTGGAACCCAGTCTGAGACAGCGGATCACT
GTTGCCCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTGATATGGTGGGCCATGGGGATTTCACTCTCTCAGGAGGGAAGCCTGTAACGCCCCGAGTCCCTCAG
GTTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAGCGAGTTGGAACGCTTGGAAGTAGAGCTGACGGTGGATGATGTCTCCGCACTGTTGGCTCGACTCTTAGTGGAACCCAGTCTGAGACAGCGGATCACT
GTTGCCCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTGATATGGTGGGCCATGGGGATTTCACTCTCTCAGGAGGGAAGCCTGTAACGCCCCGAGTCCCTCAG
GTTAGTTAG
Protein sequenceShow/hide protein sequence
MHSELERLEVELTVDDVSALLARLLVEPSLRQRITVAQKEDPSLAKGFDMVGHGDFTLSGGKPVTPRVPQVS