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Moc08g26010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:18693443..18697297
RNA-Seq ExpressionMoc08g26010
SyntenyMoc08g26010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]3.3e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

TYK09767.1 uncharacterized protein E5676_scaffold127G00510 [Cucumis melo var. makuwa]6.6e-4238.72Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  VS++ DPN  ILQ I+G++++MRE+R+ERRA +QRE R+ QED+GMF  +  ER++G      GRGRNN A +MQPRR++RVHE+RD  V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQR--------------
        IP F G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPI+TCE+LKEAMRKR V  H +R              
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQR--------------

Query:  ----------------------------------------------------------------------LCQKRVIVIRNGVLDPDDDCDEHDAQFHEE
                                                                                 KRV+V+RNGV+D +D+C+E+DAQ  EE
Subjt:  ----------------------------------------------------------------------LCQKRVIVIRNGVLDPDDDCDEHDAQFHEE

Query:  SEAH-DDECIEEGFSVQ--THWRLGKRL
         E   DDE IEEG S+   T W L  ++
Subjt:  SEAH-DDECIEEGFSVQ--THWRLGKRL

TYK22420.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.3e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

TYK26105.1 F15O4.13 [Cucumis melo var. makuwa]3.3e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

XP_022158402.1 uncharacterized protein LOC111024891 [Momordica charantia]9.9e-4657.5Show/hide
Query:  ILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVGGRGRNNFAKIMQPRRLERVHENRDGRVQFKIPPFNGAADPKAYLQQERKIEHV
        ILQ+I+G++EMMREDR+ERR Q++REERVLQED+GMF FDVQER+VGGRGRNNFA IMQPRRLERVHENRDGRV+ KIP F G ADP+AYLQ ERKIEHV
Subjt:  ILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVGGRGRNNFAKIMQPRRLERVHENRDGRVQFKIPPFNGAADPKAYLQQERKIEHV

Query:  ------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNGVLDPDDDCDE-----HDAQFHEESE
                                 WYQH+K EKRRKEE PIET E+LKEAMRKR    H +   + ++  +R G    D+   E       A   EE E
Subjt:  ------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNGVLDPDDDCDE-----HDAQFHEESE

TrEMBL top hitse value%identityAlignment
A0A5D3C3D3 F15O4.131.6e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

A0A5D3CCP8 CCHC-type domain-containing protein3.2e-4238.72Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  VS++ DPN  ILQ I+G++++MRE+R+ERRA +QRE R+ QED+GMF  +  ER++G      GRGRNN A +MQPRR++RVHE+RD  V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQR--------------
        IP F G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPI+TCE+LKEAMRKR V  H +R              
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQR--------------

Query:  ----------------------------------------------------------------------LCQKRVIVIRNGVLDPDDDCDEHDAQFHEE
                                                                                 KRV+V+RNGV+D +D+C+E+DAQ  EE
Subjt:  ----------------------------------------------------------------------LCQKRVIVIRNGVLDPDDDCDEHDAQFHEE

Query:  SEAH-DDECIEEGFSVQ--THWRLGKRL
         E   DDE IEEG S+   T W L  ++
Subjt:  SEAH-DDECIEEGFSVQ--THWRLGKRL

A0A5D3CK70 F15O4.131.6e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

A0A5D3DRJ1 F15O4.131.6e-4153.03Show/hide
Query:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK
        MS DG  V +V DPN  ILQ I+G++E+MRE+R+ERRAQ+QRE R  QED+GMF  +  ER++G      GRGRNN A +MQPRR+ERVHE+RDG V+ K
Subjt:  MSQDG--VSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVG------GRGRNNFAKIMQPRRLERVHENRDGRVQFK

Query:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG
        IPPF G AD + YLQ ERKIEHV                        EWY ++K E+RRKEEDPIET E+LKEAMRKR V  H +R  + ++  +R G
Subjt:  IPPFNGAADPKAYLQQERKIEHV------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNG

A0A6J1DX52 uncharacterized protein LOC1110248914.8e-4657.5Show/hide
Query:  ILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVGGRGRNNFAKIMQPRRLERVHENRDGRVQFKIPPFNGAADPKAYLQQERKIEHV
        ILQ+I+G++EMMREDR+ERR Q++REERVLQED+GMF FDVQER+VGGRGRNNFA IMQPRRLERVHENRDGRV+ KIP F G ADP+AYLQ ERKIEHV
Subjt:  ILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVGGRGRNNFAKIMQPRRLERVHENRDGRVQFKIPPFNGAADPKAYLQQERKIEHV

Query:  ------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNGVLDPDDDCDE-----HDAQFHEESE
                                 WYQH+K EKRRKEE PIET E+LKEAMRKR    H +   + ++  +R G    D+   E       A   EE E
Subjt:  ------------------------EWYQHIKFEKRRKEEDPIETCEDLKEAMRKR-VWIHEQRLCQKRVIVIRNGVLDPDDDCDE-----HDAQFHEESE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAGGATGGAGTATCACAAGTAAAAGATCCTAATTTTACCATTCTTCAAACAATTAAAGGTTTGATAGAAATGATGAGGGAGGATAGGAAAGAAAGAAGA
GCGCAACGACAAAGAGAAGAACGAGTCTTACAAGAAGATAAAGGCATGTTTGCCTTCGATGTCCAGGAAAGAAAAGTTGGAGGAAGAGGAAGGAATAACTTCGCC
AAGATTATGCAACCGAGGAGATTGGAAAGAGTTCATGAAAATAGAGATGGCAGAGTTCAATTCAAAATTCCACCCTTTAATGGAGCGGCAGACCCAAAGGCATAC
TTACAACAGGAGAGGAAAATAGAACATGTTGAATGGTATCAACATATTAAATTCGAGAAAAGAAGGAAGGAGGAAGATCCAATAGAAACTTGTGAAGACCTCAAA
GAAGCCATGAGAAAGAGGGTTTGGATACATGAGCAAAGATTGTGTCAAAAAAGAGTCATAGTGATAAGAAATGGAGTACTTGACCCGGATGATGATTGTGATGAA
CATGATGCACAATTTCATGAAGAATCTGAAGCACATGATGATGAGTGTATTGAAGAAGGGTTTAGCGTGCAGACTCACTGGAGGCTCGGAAAGCGACTGTGCATG
GATCTACTTCTGTTAGCTATAGTTTTCTTCGTTCTTTCTGAAACAGAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAGGATGGAGTATCACAAGTAAAAGATCCTAATTTTACCATTCTTCAAACAATTAAAGGTTTGATAGAAATGATGAGGGAGGATAGGAAAGAAAGAAGA
GCGCAACGACAAAGAGAAGAACGAGTCTTACAAGAAGATAAAGGCATGTTTGCCTTCGATGTCCAGGAAAGAAAAGTTGGAGGAAGAGGAAGGAATAACTTCGCC
AAGATTATGCAACCGAGGAGATTGGAAAGAGTTCATGAAAATAGAGATGGCAGAGTTCAATTCAAAATTCCACCCTTTAATGGAGCGGCAGACCCAAAGGCATAC
TTACAACAGGAGAGGAAAATAGAACATGTTGAATGGTATCAACATATTAAATTCGAGAAAAGAAGGAAGGAGGAAGATCCAATAGAAACTTGTGAAGACCTCAAA
GAAGCCATGAGAAAGAGGGTTTGGATACATGAGCAAAGATTGTGTCAAAAAAGAGTCATAGTGATAAGAAATGGAGTACTTGACCCGGATGATGATTGTGATGAA
CATGATGCACAATTTCATGAAGAATCTGAAGCACATGATGATGAGTGTATTGAAGAAGGGTTTAGCGTGCAGACTCACTGGAGGCTCGGAAAGCGACTGTGCATG
GATCTACTTCTGTTAGCTATAGTTTTCTTCGTTCTTTCTGAAACAGAGCAGTGA
Protein sequenceShow/hide protein sequence
MSQDGVSQVKDPNFTILQTIKGLIEMMREDRKERRAQRQREERVLQEDKGMFAFDVQERKVGGRGRNNFAKIMQPRRLERVHENRDGRVQFKIPPFNGAADPKAY
LQQERKIEHVEWYQHIKFEKRRKEEDPIETCEDLKEAMRKRVWIHEQRLCQKRVIVIRNGVLDPDDDCDEHDAQFHEESEAHDDECIEEGFSVQTHWRLGKRLCM
DLLLLAIVFFVLSETEQ