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Moc08g26230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:18805332..18806530
RNA-Seq ExpressionMoc08g26230
SyntenyMoc08g26230
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]1.4e-2252.5Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQ---------DRGKPVE
        + +FVV+NG SAYN IFG+PIIH+FQ +PSTLHQVLKY     V  +RGE K SRECY+  LK  ++C A+ + A+  E L S+         +   P+E
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQ---------DRGKPVE

Query:  ELELVPVFTLEKQVSIRMKL
        ELELVP+ +LE+QVSIR KL
Subjt:  ELELVPVFTLEKQVSIRMKL

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]4.1e-1951.82Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV
        + +FVVV+G S YN IFG+PIIH+F+ IPSTLHQVLKYP    V  VRGE   SRECY+ ALK  ++C A+  L D        L  ++   P EELELV
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV

Query:  PVFTLEKQVS
        P+ + EKQ++
Subjt:  PVFTLEKQVS

XP_022157402.1 uncharacterized protein LOC111024109 [Momordica charantia]1.0e-2253.27Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT
        V +FVV++ SSAYN I G+P+IH  + +PST HQVLKYP    +  VRGE K SRECY+ A+K    C+A+T  A+P       +RG P EELELVP+  
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT

Query:  LEKQVSI
        LE QVSI
Subjt:  LEKQVSI

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]7.0e-1952.78Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV
        +T+FVVV+G S YN IFG+PIIH+F+ IPSTLHQVLKY     V  VRGE  +SRECY+ ALK  ++C A+  L D        L  ++   P EELELV
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV

Query:  PVFTLEKQ
        P+ + EKQ
Subjt:  PVFTLEKQ

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]3.4e-2149.12Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT
        V +FVV++ SS YN I G+P+I   + +PST HQVLKYP    +  VRGE K+SRECY+ A+K    C+A+T  A+P        RG P EELELVP+  
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT

Query:  LEKQVSIRMKLEPQ
         EKQVSI  +L  +
Subjt:  LEKQVSIRMKLEPQ

TrEMBL top hitse value%identityAlignment
A0A6J1D787 uncharacterized protein LOC1110182676.6e-2352.5Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQ---------DRGKPVE
        + +FVV+NG SAYN IFG+PIIH+FQ +PSTLHQVLKY     V  +RGE K SRECY+  LK  ++C A+ + A+  E L S+         +   P+E
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQ---------DRGKPVE

Query:  ELELVPVFTLEKQVSIRMKL
        ELELVP+ +LE+QVSIR KL
Subjt:  ELELVPVFTLEKQVSIRMKL

A0A6J1DT04 uncharacterized protein LOC1110228802.0e-1951.82Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV
        + +FVVV+G S YN IFG+PIIH+F+ IPSTLHQVLKYP    V  VRGE   SRECY+ ALK  ++C A+  L D        L  ++   P EELELV
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV

Query:  PVFTLEKQVS
        P+ + EKQ++
Subjt:  PVFTLEKQVS

A0A6J1DUD8 uncharacterized protein LOC1110241095.1e-2353.27Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT
        V +FVV++ SSAYN I G+P+IH  + +PST HQVLKYP    +  VRGE K SRECY+ A+K    C+A+T  A+P       +RG P EELELVP+  
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT

Query:  LEKQVSI
        LE QVSI
Subjt:  LEKQVSI

A0A6J1DY08 uncharacterized protein LOC1110256241.6e-2149.12Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT
        V +FVV++ SS YN I G+P+I   + +PST HQVLKYP    +  VRGE K+SRECY+ A+K    C+A+T  A+P        RG P EELELVP+  
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFT

Query:  LEKQVSIRMKLEPQ
         EKQVSI  +L  +
Subjt:  LEKQVSIRMKLEPQ

A0A6J1DYW5 uncharacterized protein LOC1110243323.4e-1952.78Show/hide
Query:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV
        +T+FVVV+G S YN IFG+PIIH+F+ IPSTLHQVLKY     V  VRGE  +SRECY+ ALK  ++C A+  L D        L  ++   P EELELV
Subjt:  VTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADP----REGLSSQDRGKPVEELELV

Query:  PVFTLEKQ
        P+ + EKQ
Subjt:  PVFTLEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTATGTCACCAAGTTCGTGGTGGTCAATGGAAGTTCTGCTTACAATACCATATTTGGCCAACCCATAATTCACACCTTTCAAGAAATTCCCTCTACATTG
CACCAAGTCTTGAAGTACCCGATTGAGAAACGGGTTGAGATAGTCCGAGGTGAACATAAGATCTCGAGGGAATGTTATTCAGTTGCACTCAAAGAGATAGCAATC
TGTTCGGCTATCACAAAGCTAGCCGACCCAAGAGAGGGCCTCTCTTCTCAAGATCGTGGAAAACCTGTAGAAGAGTTAGAGCTTGTCCCAGTATTTACTCTTGAG
AAGCAAGTCAGCATCAGAATGAAGCTAGAGCCACAAACCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTATGTCACCAAGTTCGTGGTGGTCAATGGAAGTTCTGCTTACAATACCATATTTGGCCAACCCATAATTCACACCTTTCAAGAAATTCCCTCTACATTG
CACCAAGTCTTGAAGTACCCGATTGAGAAACGGGTTGAGATAGTCCGAGGTGAACATAAGATCTCGAGGGAATGTTATTCAGTTGCACTCAAAGAGATAGCAATC
TGTTCGGCTATCACAAAGCTAGCCGACCCAAGAGAGGGCCTCTCTTCTCAAGATCGTGGAAAACCTGTAGAAGAGTTAGAGCTTGTCCCAGTATTTACTCTTGAG
AAGCAAGTCAGCATCAGAATGAAGCTAGAGCCACAAACCGATTAG
Protein sequenceShow/hide protein sequence
MGYVTKFVVVNGSSAYNTIFGQPIIHTFQEIPSTLHQVLKYPIEKRVEIVRGEHKISRECYSVALKEIAICSAITKLADPREGLSSQDRGKPVEELELVPVFTLE
KQVSIRMKLEPQTD