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Moc08g26290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr8:18858152..18858571
RNA-Seq ExpressionMoc08g26290
SyntenyMoc08g26290
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7055049.1 unnamed protein product [Microthlaspi erraticum]4.2e-0739.13Show/hide
Query:  DLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWL
        D + E  +   +++ G +SD D   + LN QP +L NY LARDR+RR  RPPS +   D V YAL +      +EP  Y  A+ S D ++W+
Subjt:  DLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWL

GAU10233.1 hypothetical protein TSUD_417410 [Trifolium subterraneum]3.2e-0736.45Show/hide
Query:  RVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSS
        + +NLN     G E+   EVE     T+  G  +                 Y+LARDR+RR+IRPP+RYG  DL+ YALN      D+EP ++  A  S 
Subjt:  RVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSS

Query:  DSEKWLK
        + + WLK
Subjt:  DSEKWLK

PKU72844.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum]2.9e-0845.45Show/hide
Query:  PQPIDLKN--YRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWLK
        P+P+   N  Y L+RDR+RR I+PPS+YG  +L+ YAL + + + D+EP+ Y  A++  DSE W+K
Subjt:  PQPIDLKN--YRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWLK

RVW68249.1 hypothetical protein CK203_064680 [Vitis vinifera]1.9e-0736.09Show/hide
Query:  SRNSSVKA-PEKITFKMELDPPMSNNSRVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVD
        S+N S+    +   FKMEL     ++ R    N++ + G E  D +V   +V   +GGA          N Q   L +Y L+RDR +R I+PP R+G  D
Subjt:  SRNSSVKA-PEKITFKMELDPPMSNNSRVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVD

Query:  LVYYALNTEINHSDNEPMDYAAAINSSDSEKWL
        L+ YAL T + + ++EP+ Y  AIN+++S KWL
Subjt:  LVYYALNTEINHSDNEPMDYAAAINSSDSEKWL

RZC25599.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]8.5e-0839.64Show/hide
Query:  NNSRVENLNEIENKGAEDLD-AEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAA
        NN+  EN N  E + +E LD   V+ ID +T+ G A D++   +       DL NY+L RDR++R I+PP RYG+ D++ YAL+      ++EP  +  A
Subjt:  NNSRVENLNEIENKGAEDLD-AEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAA

Query:  INSSDSEKWLK
        I S DS+ WL+
Subjt:  INSSDSEKWLK

TrEMBL top hitse value%identityAlignment
A0A1B5Z7Z8 Uncharacterized protein1.6e-0736.45Show/hide
Query:  RVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSS
        + +NLN     G E+   EVE     T+  G  +                 Y+LARDR+RR+IRPP+RYG  DL+ YALN      D+EP ++  A  S 
Subjt:  RVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSS

Query:  DSEKWLK
        + + WLK
Subjt:  DSEKWLK

A0A2I0WB13 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0845.45Show/hide
Query:  PQPIDLKN--YRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWLK
        P+P+   N  Y L+RDR+RR I+PPS+YG  +L+ YAL + + + D+EP+ Y  A++  DSE W+K
Subjt:  PQPIDLKN--YRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWLK

A0A438G7Q9 CCHC-type domain-containing protein9.2e-0836.09Show/hide
Query:  SRNSSVKA-PEKITFKMELDPPMSNNSRVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVD
        S+N S+    +   FKMEL     ++ R    N++ + G E  D +V   +V   +GGA          N Q   L +Y L+RDR +R I+PP R+G  D
Subjt:  SRNSSVKA-PEKITFKMELDPPMSNNSRVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVD

Query:  LVYYALNTEINHSDNEPMDYAAAINSSDSEKWL
        L+ YAL T + + ++EP+ Y  AIN+++S KWL
Subjt:  LVYYALNTEINHSDNEPMDYAAAINSSDSEKWL

A0A445LQL6 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-0839.64Show/hide
Query:  NNSRVENLNEIENKGAEDLD-AEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAA
        NN+  EN N  E + +E LD   V+ ID +T+ G A D++   +       DL NY+L RDR++R I+PP RYG+ D++ YAL+      ++EP  +  A
Subjt:  NNSRVENLNEIENKGAEDLD-AEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAA

Query:  INSSDSEKWLK
        I S DS+ WL+
Subjt:  INSSDSEKWLK

A0A6D2KKN5 Integrase catalytic domain-containing protein2.0e-0739.13Show/hide
Query:  DLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWL
        D + E  +   +++ G +SD D   + LN QP +L NY LARDR+RR  RPPS +   D V YAL +      +EP  Y  A+ S D ++W+
Subjt:  DLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDLVYYALNTEINHSDNEPMDYAAAINSSDSEKWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATAATGTCTCAAGAAACTCATCTGTTAAAGCACCAGAAAAAATCACCTTCAAAATGGAGTTGGATCCTCCAATGTCTAATAATTCTAGAGTTGAAAAC
TTGAATGAAATAGAAAATAAAGGTGCAGAAGACTTAGATGCTGAAGTTGAGAACATTGATGTAAACACCAATGATGGTGGAGCTTCTGACCATGATGCACAAACT
TTAACACTTAACCCACAGCCCATTGATCTTAAAAATTATAGACTTGCAAGAGATAGACAGAGGAGGGAAATTAGGCCCCCATCCAGATATGGAAATGTAGATTTG
GTTTATTATGCTTTGAATACTGAAATTAACCATTCAGATAATGAACCCATGGATTATGCTGCTGCAATAAATTCTTCTGATAGTGAAAAATGGCTGAAACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATAATGTCTCAAGAAACTCATCTGTTAAAGCACCAGAAAAAATCACCTTCAAAATGGAGTTGGATCCTCCAATGTCTAATAATTCTAGAGTTGAAAAC
TTGAATGAAATAGAAAATAAAGGTGCAGAAGACTTAGATGCTGAAGTTGAGAACATTGATGTAAACACCAATGATGGTGGAGCTTCTGACCATGATGCACAAACT
TTAACACTTAACCCACAGCCCATTGATCTTAAAAATTATAGACTTGCAAGAGATAGACAGAGGAGGGAAATTAGGCCCCCATCCAGATATGGAAATGTAGATTTG
GTTTATTATGCTTTGAATACTGAAATTAACCATTCAGATAATGAACCCATGGATTATGCTGCTGCAATAAATTCTTCTGATAGTGAAAAATGGCTGAAACAGTAG
Protein sequenceShow/hide protein sequence
MSNNVSRNSSVKAPEKITFKMELDPPMSNNSRVENLNEIENKGAEDLDAEVENIDVNTNDGGASDHDAQTLTLNPQPIDLKNYRLARDRQRREIRPPSRYGNVDL
VYYALNTEINHSDNEPMDYAAAINSSDSEKWLKQ